MGE detailed information
MGE type: IScluster/Tn MGE length: 6361 bp
Accession: NZ_CP025600 Location: 3795095..3801455 Organism: Mycobacterium tuberculosis strain GG-77-11 Replicon: chromosome
Accession: NZ_CP025600 Location: 3795095..3801455 Organism: Mycobacterium tuberculosis strain GG-77-11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C0088_RS18520 () | 3790151..3790804 | + | 654 | WP_003417903.1 | HAD family phosphatase | - |
| C0088_RS18525 () | 3790843..3792348 | - | 1506 | WP_003417905.1 | type B diterpene cyclase | - |
| C0088_RS18530 () | 3792353..3793243 | - | 891 | WP_003417908.1 | diterpene synthase | - |
| C0088_RS18535 () | 3793252..3795043 | - | 1792 | Protein_3501 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| C0088_RS18550 () | 3796440..3797429 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| C0088_RS18555 () | 3797429..3798481 | - | 1053 | WP_003900678.1 | polyprenyl synthetase family protein | - |
| C0088_RS18560 () | 3799235..3799627 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C0088_RS18565 () | 3799627..3799902 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C0088_RS18570 () | 3800114..3801455 | + | 1342 | Protein_3507 | ISNCY family transposase ISRjo3 | Transposase |
| C0088_RS18575 () | 3801645..3803840 | + | 2196 | WP_103656219.1 | PE family protein | - |
| C0088_RS18580 () | 3803911..3804783 | - | 873 | WP_003417929.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| C0088_RS18585 () | 3804857..3805567 | + | 711 | WP_003417932.1 | phosphoglycerate mutase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0 |