MGE detailed information
MGE type: Prophage MGE length: 30804 bp
Accession: NZ_CP025600 Location: 3549674..3580477 Organism: Mycobacterium tuberculosis strain GG-77-11 Replicon: chromosome
Accession: NZ_CP025600 Location: 3549674..3580477 Organism: Mycobacterium tuberculosis strain GG-77-11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C0088_RS17420 () | 3545430..3546290 | + | 861 | WP_003416628.1 | alpha/beta hydrolase | - |
| C0088_RS17425 () | 3546385..3546780 | + | 396 | WP_071854247.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| C0088_RS17435 () | 3547020..3547313 | + | 294 | WP_003416635.1 | hypothetical protein | - |
| C0088_RS17440 () | 3547601..3548890 | + | 1290 | WP_003906996.1 | ATP-binding protein | - |
| C0088_RS17445 () | 3549237..3549671 | - | 435 | WP_003899952.1 | type II toxin-antitoxin system VapC family toxin | - |
| C0088_RS17450 () | 3549674..3550126 | - | 453 | WP_003899953.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| C0088_RS17455 () | 3550357..3550701 | + | 345 | WP_003899954.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C0088_RS17460 () | 3550698..3551027 | + | 330 | WP_003899955.1 | XRE family transcriptional regulator | Antitoxin Detail |
| C0088_RS17465 () | 3551264..3552525 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| C0088_RS17470 () | 3552746..3554007 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| C0088_RS17475 () | 3554280..3554627 | + | 348 | WP_003899956.1 | DUF2384 domain-containing protein | - |
| C0088_RS17480 () | 3554624..3555244 | + | 621 | WP_003899957.1 | RES family NAD+ phosphorylase | - |
| C0088_RS17485 () | 3555404..3556669 | - | 1266 | WP_003902423.1 | hypothetical protein | - |
| C0088_RS17490 () | 3556837..3557046 | + | 210 | WP_003416778.1 | hypothetical protein | - |
| C0088_RS17500 () | 3557293..3558327 | - | 1035 | WP_003416786.1 | IS30 family transposase ISLxc3 | Transposase |
| C0088_RS17505 () | 3558611..3558835 | - | 225 | WP_003416790.1 | hypothetical protein | - |
| C0088_RS17520 () | 3559542..3560006 | + | 465 | WP_003913440.1 | LLM class flavin-dependent oxidoreductase | - |
| C0088_RS17525 () | 3560176..3563154 | - | 2979 | WP_003899961.1 | UPF0182 family protein | - |
| C0088_RS17530 () | 3563246..3564268 | - | 1023 | WP_003416799.1 | PDZ domain-containing protein | - |
| C0088_RS17535 () | 3564346..3565764 | + | 1419 | WP_012054345.1 | zinc-dependent metalloprotease | - |
| C0088_RS17540 () | 3565803..3566669 | + | 867 | WP_021082912.1 | hypothetical protein | - |
| C0088_RS17545 () | 3566678..3566851 | - | 174 | WP_015456486.1 | hypothetical protein | - |
| C0088_RS17550 () | 3567006..3568349 | + | 1344 | WP_003416815.1 | AarF/ABC1/UbiB kinase family protein | - |
| C0088_RS17555 () | 3568383..3568661 | - | 279 | WP_003899963.1 | transcriptional regulator WhiB7 | - |
| C0088_RS17560 () | 3569091..3571193 | - | 2103 | WP_003416822.1 | ATP-dependent DNA helicase UvrD2 | - |
| C0088_RS17565 () | 3571317..3571571 | + | 255 | WP_003416827.1 | mycoredoxin Mrx1 | - |
| C0088_RS17570 () | 3571584..3572525 | - | 942 | WP_003899965.1 | NAD(+) diphosphatase | - |
| C0088_RS17575 () | 3572584..3573651 | - | 1068 | WP_003899966.1 | potassium channel family protein | - |
| C0088_RS17580 () | 3573713..3577018 | - | 3306 | WP_003416833.1 | ATP-dependent DNA helicase AdnB | - |
| C0088_RS17585 () | 3577015..3580182 | - | 3168 | WP_003899967.1 | ATP-dependent DNA helicase AdnA | - |
| C0088_RS17590 () | 3580268..3580477 | + | 210 | WP_003907005.1 | hypothetical protein | - |
| C0088_RS17595 () | 3580508..3581293 | + | 786 | WP_012054346.1 | lipase LipV | - |
| C0088_RS17600 () | 3581296..3581601 | + | 306 | WP_003416847.1 | MGMT family protein | - |
| C0088_RS17605 () | 3581608..3582462 | - | 855 | WP_003416850.1 | TIGR02569 family protein | - |
| C0088_RS17610 () | 3582513..3583691 | - | 1179 | WP_003416855.1 | adenylyltransferase/sulfurtransferase MoeZ | - |
| C0088_RS17615 () | 3583782..3584810 | - | 1029 | WP_003899970.1 | DUF3152 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA127 | NC_000962 | 3547618..3580495 | 0.002 |