MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 59331 bp
Accession: NZ_CP025553 Location: 1..59331 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain ATCC BAA-708 Replicon: plasmid pPIR00558
Accession: NZ_CP025553 Location: 1..59331 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain ATCC BAA-708 Replicon: plasmid pPIR00558
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C0Z09_RS00010 () | 629..1654 | + | 1026 | WP_001576625.1 | ExeA family protein | - |
| C0Z09_RS00015 () | 1843..2879 | - | 1037 | Protein_2 | IS630 family transposase | - |
| C0Z09_RS00020 () | 3487..4379 | + | 893 | Protein_3 | virulence genes transcriptional activator SpvR | - |
| C0Z09_RS00025 () | 4553..4717 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| C0Z09_RS00030 () | 4891..5656 | + | 766 | Protein_5 | virulence protein SpvA | - |
| C0Z09_RS00035 () | 5838..7610 | + | 1773 | Protein_6 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| C0Z09_RS00040 () | 7891..8616 | + | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| C0Z09_RS00045 () | 8877..9526 | + | 650 | Protein_8 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| C0Z09_RS00050 () | 9653..10078 | - | 426 | WP_000064919.1 | IS200/IS605 family transposase | - |
| C0Z09_RS00055 () | 10135..10485 | + | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| C0Z09_RS00060 () | 10552..11111 | - | 560 | Protein_11 | inverse autotransporter beta domain-containing protein | - |
| C0Z09_RS24405 () | 11267..11554 | + | 288 | WP_071530243.1 | hypothetical protein | - |
| C0Z09_RS00070 () | 11831..12316 | - | 486 | WP_000905606.1 | membrane protein | - |
| C0Z09_RS00075 () | 12310..12819 | - | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| C0Z09_RS00080 () | 12823..13536 | - | 714 | WP_000545756.1 | EAL domain-containing protein | - |
| C0Z09_RS00085 () | 13545..14327 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| C0Z09_RS00090 () | 14362..14883 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| C0Z09_RS00095 () | 14880..15170 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| C0Z09_RS00100 () | 15172..15477 | - | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C0Z09_RS00105 () | 15479..15697 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C0Z09_RS00110 () | 16372..16893 | + | 522 | WP_077681952.1 | hypothetical protein | - |
| C0Z09_RS24410 () | 16936..17364 | - | 429 | Protein_22 | hypothetical protein | - |
| C0Z09_RS00120 () | 17376..17671 | + | 296 | Protein_23 | cytoplasmic protein | - |
| C0Z09_RS00125 () | 18165..19154 | + | 990 | WP_000461382.1 | RepB family plasmid replication initiator protein | - |
| C0Z09_RS00130 () | 19481..19642 | - | 162 | WP_015059604.1 | hypothetical protein | - |
| C0Z09_RS00135 () | 19695..20081 | - | 387 | WP_000751876.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| C0Z09_RS00140 () | 20448..20759 | - | 312 | WP_015059605.1 | hypothetical protein | - |
| C0Z09_RS00145 () | 20788..21090 | + | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| C0Z09_RS00150 () | 21365..21889 | + | 525 | WP_000748204.1 | fimbrial protein | - |
| C0Z09_RS00155 () | 22116..24524 | + | 2409 | WP_000007891.1 | outer membrane usher protein PefC | - |
| C0Z09_RS00160 () | 24517..25209 | + | 693 | WP_001038509.1 | fimbrial chaperone PefD | - |
| C0Z09_RS00165 () | 25206..25784 | + | 579 | WP_000085742.1 | hypothetical protein | - |
| C0Z09_RS00170 () | 25967..26821 | + | 855 | WP_001676641.1 | hypothetical protein | - |
| C0Z09_RS00175 () | 27081..27293 | + | 213 | WP_000004289.1 | transcriptional regulator PefI | - |
| C0Z09_RS00180 () | 27278..27628 | + | 351 | WP_000135399.1 | helix-turn-helix transcriptional regulator | - |
| C0Z09_RS00185 () | 27872..28527 | + | 656 | Protein_36 | DsbA family protein | - |
| C0Z09_RS24415 () | 28517..28663 | + | 147 | WP_001141718.1 | hypothetical protein | - |
| C0Z09_RS00190 () | 28714..28977 | + | 264 | WP_107336828.1 | SdiA-regulated domain-containing protein | - |
| C0Z09_RS00195 () | 28938..29540 | + | 603 | Protein_39 | YjiK family protein | - |
| C0Z09_RS00200 () | 29630..30187 | + | 558 | WP_000725064.1 | complement resistance protein Rck | - |
| C0Z09_RS00205 () | 30452..31198 | + | 747 | WP_000417897.1 | AraC family transcriptional regulator | - |
| C0Z09_RS00210 () | 31295..31516 | - | 222 | WP_071530245.1 | SdiA-regulated domain-containing protein | - |
| C0Z09_RS00220 () | 32372..33253 | - | 882 | WP_001676666.1 | incFII family plasmid replication initiator RepA | - |
| C0Z09_RS00225 () | 33234..33311 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| C0Z09_RS00230 () | 33561..33827 | - | 267 | WP_016710725.1 | replication regulatory protein RepA | - |
| C0Z09_RS00235 () | 34006..34245 | - | 240 | WP_077681954.1 | phospholipase | - |
| C0Z09_RS00240 () | 34202..34486 | - | 285 | WP_001676658.1 | hypothetical protein | - |
| C0Z09_RS00245 () | 34608..35060 | - | 453 | WP_000477657.1 | DSBA oxidoreductase | - |
| C0Z09_RS00250 () | 35177..35599 | - | 423 | Protein_49 | fertility inhibition protein FinO | - |
| C0Z09_RS00255 () | 35679..36193 | - | 515 | Protein_50 | type IV conjugative transfer system lipoprotein TraV | - |
| C0Z09_RS00260 () | 36190..36414 | - | 225 | WP_016716015.1 | DUF2689 domain-containing protein | - |
| C0Z09_RS00265 () | 36392..36988 | - | 597 | WP_000527901.1 | conjugal transfer protein TraP | - |
| C0Z09_RS00270 () | 36978..38399 | - | 1422 | WP_000146697.1 | conjugal transfer protein TraB | - |
| C0Z09_RS00275 () | 38399..39138 | - | 740 | Protein_54 | type-F conjugative transfer system secretin TraK | - |
| C0Z09_RS00280 () | 39125..39691 | - | 567 | WP_000399767.1 | type IV conjugative transfer system protein TraE | - |
| C0Z09_RS00285 () | 39713..40024 | - | 312 | WP_000012130.1 | type IV conjugative transfer system protein TraL | - |
| C0Z09_RS00290 () | 40039..40401 | - | 363 | WP_001274199.1 | type IV conjugative transfer system pilin TraA | - |
| C0Z09_RS00295 () | 40443..40670 | - | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| C0Z09_RS00300 () | 40764..41449 | - | 686 | Protein_59 | PAS domain-containing protein | - |
| C0Z09_RS00305 () | 41643..42023 | - | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| C0Z09_RS00315 () | 42438..42907 | + | 470 | Protein_61 | transglycosylase SLT domain-containing protein | - |
| C0Z09_RS24420 () | 43218..44036 | - | 819 | Protein_62 | DUF945 domain-containing protein | - |
| C0Z09_RS24425 () | 44139..44297 | - | 159 | WP_001704449.1 | hypothetical protein | - |
| C0Z09_RS00325 () | 44546..45202 | - | 657 | Protein_64 | plasmid SOS inhibition protein A | - |
| C0Z09_RS00330 () | 45139..45303 | - | 165 | WP_001676653.1 | hypothetical protein | - |
| C0Z09_RS00335 () | 45345..47096 | - | 1752 | WP_001137853.1 | ParB/RepB/Spo0J family partition protein | - |
| C0Z09_RS00340 () | 47367..47788 | + | 422 | Protein_67 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C0Z09_RS00345 () | 47788..49061 | + | 1274 | Protein_68 | Y-family DNA polymerase | - |
| C0Z09_RS00350 () | 49143..50117 | - | 975 | WP_000064277.1 | ParB/RepB/Spo0J family partition protein | - |
| C0Z09_RS00355 () | 50117..51322 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| C0Z09_RS00360 () | 51737..52678 | + | 942 | WP_000728919.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| C0Z09_RS00365 () | 52675..53280 | - | 606 | WP_000176303.1 | DUF2913 family protein | - |
| C0Z09_RS00370 () | 53337..53671 | - | 335 | Protein_73 | hypothetical protein | - |
| C0Z09_RS00375 () | 53855..54271 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| C0Z09_RS00380 () | 54357..55472 | - | 1116 | WP_001247117.1 | DNA-binding protein | - |
| C0Z09_RS00385 () | 55730..56218 | + | 489 | WP_001135409.1 | hypothetical protein | - |
| C0Z09_RS00395 () | 56873..57613 | + | 741 | WP_001541566.1 | carbonic anhydrase | - |
| C0Z09_RS00400 () | 57820..58380 | + | 561 | WP_001240330.1 | recombinase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|