MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 96532 bp
Accession: NZ_CP025455 Location: 1..96532 Organism: Salmonella enterica subsp. enterica serovar Agona strain USDA-ARS-USMARC-76334 Replicon: plasmid pSAG-76334
Accession: NZ_CP025455 Location: 1..96532 Organism: Salmonella enterica subsp. enterica serovar Agona strain USDA-ARS-USMARC-76334 Replicon: plasmid pSAG-76334
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CYL23_RS23140 () | 455..1486 | + | 1032 | WP_000907852.1 | replication initiation protein | - |
| CYL23_RS23160 () | 2390..2674 | + | 285 | WP_001178087.1 | ribbon-helix-helix protein, CopG family | Antitoxin Detail |
| CYL23_RS23165 () | 2674..2949 | + | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CYL23_RS23170 () | 3055..3336 | + | 282 | WP_006855660.1 | hypothetical protein | - |
| CYL23_RS23180 () | 3760..5091 | - | 1332 | Protein_4 | Tn3 family transposase | - |
| CYL23_RS23185 () | 5124..8129 | - | 3006 | WP_001143760.1 | Tn3-like element Tn3 family transposase | - |
| CYL23_RS23190 () | 8293..8850 | + | 558 | WP_001235713.1 | recombinase family protein | - |
| CYL23_RS23195 () | 9033..9893 | + | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| CYL23_RS23200 () | 10038..11600 | - | 1563 | Protein_8 | DUF4158 domain-containing protein | - |
| CYL23_RS23205 () | 11726..12340 | + | 615 | WP_000904906.1 | recombinase family protein | - |
| CYL23_RS23210 () | 12405..13534 | + | 1130 | WP_085959879.1 | IS3-like element IS1133 family transposase | - |
| CYL23_RS23215 () | 13641..14444 | + | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| CYL23_RS23220 () | 14444..15280 | + | 837 | WP_024139657.1 | APH(6)-I family aminoglycoside O-phosphotransferase | - |
| CYL23_RS23225 () | 15459..15953 | - | 495 | WP_015058884.1 | hypothetical protein | - |
| CYL23_RS23230 () | 16009..16611 | - | 603 | WP_000521606.1 | hypothetical protein | - |
| CYL23_RS23235 () | 16787..17839 | - | 1053 | WP_000655519.1 | hypothetical protein | - |
| CYL23_RS23240 () | 18052..18642 | - | 591 | WP_001401589.1 | hypothetical protein | - |
| CYL23_RS23245 () | 18642..18896 | - | 255 | WP_000343106.1 | hypothetical protein | - |
| CYL23_RS23260 () | 19429..19809 | + | 381 | WP_000465035.1 | hypothetical protein | - |
| CYL23_RS23265 () | 19811..20590 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| CYL23_RS23270 () | 20770..21414 | + | 645 | WP_001144036.1 | ParA family protein | - |
| CYL23_RS23275 () | 21501..21809 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| CYL23_RS23280 () | 22223..23203 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| CYL23_RS23285 () | 23196..23612 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| CYL23_RS23290 () | 23614..24888 | - | 1275 | WP_006855644.1 | Y-family DNA polymerase | - |
| CYL23_RS23295 () | 24888..25325 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CYL23_RS23300 () | 25322..25570 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| CYL23_RS23310 () | 25988..26890 | + | 903 | WP_176547978.1 | DUF1281 domain-containing protein | - |
| CYL23_RS23315 () | 26894..27199 | + | 306 | WP_015058890.1 | hypothetical protein | - |
| CYL23_RS23320 () | 27275..27958 | + | 684 | WP_000086144.1 | DNA methylase | - |
| CYL23_RS23325 () | 27959..28180 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| CYL23_RS23330 () | 28193..28627 | + | 435 | WP_000274472.1 | DUF1380 family protein | - |
| CYL23_RS23335 () | 28678..29448 | + | 771 | WP_001434682.1 | hypothetical protein | - |
| CYL23_RS23345 () | 29865..30290 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| CYL23_RS23350 () | 30337..30759 | + | 423 | WP_000271741.1 | DUF1380 family protein | - |
| CYL23_RS23355 () | 30756..30947 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| CYL23_RS23375 () | 31717..32244 | + | 528 | WP_001276125.1 | single-stranded DNA-binding protein | - |
| CYL23_RS23380 () | 32302..32535 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| CYL23_RS23385 () | 32594..34552 | + | 1959 | WP_001145471.1 | ParB/RepB/Spo0J family partition protein | - |
| CYL23_RS23390 () | 34607..35041 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| CYL23_RS23395 () | 35038..35757 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| CYL23_RS23400 () | 35754..36350 | + | 597 | WP_000978005.1 | hypothetical protein | - |
| CYL23_RS23410 () | 36813..37313 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| CYL23_RS23425 () | 38042..38476 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| CYL23_RS23430 () | 38569..38835 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| CYL23_RS23435 () | 38900..39814 | + | 915 | WP_000038334.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| CYL23_RS23440 () | 39814..40059 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| CYL23_RS23445 () | 40090..40341 | - | 252 | WP_000148280.1 | helix-turn-helix domain-containing protein | - |
| CYL23_RS23450 () | 40375..40572 | - | 198 | WP_001161112.1 | hypothetical protein | - |
| CYL23_RS23460 () | 40921..41769 | + | 849 | WP_001077030.1 | DUF4942 domain-containing protein | - |
| CYL23_RS23465 () | 41855..42190 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| CYL23_RS23470 () | 42424..42756 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| CYL23_RS23475 () | 42767..45466 | + | 2700 | WP_006855641.1 | IncI1-type relaxase NikB | - |
| CYL23_RS23480 () | 45503..47794 | - | 2292 | WP_001289275.1 | hypothetical protein | - |
| CYL23_RS23485 () | 47787..48857 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| CYL23_RS23490 () | 48876..50084 | - | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| CYL23_RS23495 () | 50302..51288 | - | 987 | WP_001257838.1 | hypothetical protein | - |
| CYL23_RS23500 () | 51561..51713 | + | 153 | WP_001331364.1 | Hok/Gef family protein | - |
| CYL23_RS23505 () | 51785..52036 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| CYL23_RS23870 () | 52695..52871 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| CYL23_RS23510 () | 53203..53412 | + | 210 | WP_000062602.1 | HEAT repeat domain-containing protein | - |
| CYL23_RS23515 () | 53484..54146 | - | 663 | WP_000644792.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CYL23_RS23520 () | 54211..56379 | - | 2169 | WP_000698366.1 | DotA/TraY family protein | - |
| CYL23_RS23525 () | 56476..57060 | - | 585 | WP_001037996.1 | IncI1-type conjugal transfer protein TraX | - |
| CYL23_RS23530 () | 57089..58291 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| CYL23_RS23535 () | 58258..58872 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| CYL23_RS23540 () | 58872..61916 | - | 3045 | WP_001024776.1 | IncI1-type conjugal transfer protein TraU | - |
| CYL23_RS23545 () | 62006..62806 | - | 801 | WP_001164792.1 | IncI1-type conjugal transfer protein TraT | - |
| CYL23_RS23550 () | 62790..62978 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| CYL23_RS23555 () | 63042..63446 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| CYL23_RS23560 () | 63497..64024 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| CYL23_RS23565 () | 64024..64728 | - | 705 | WP_023155244.1 | IncI1-type conjugal transfer protein TraP | - |
| CYL23_RS23570 () | 64728..66017 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| CYL23_RS23575 () | 66020..67003 | - | 984 | WP_001191883.1 | IncI1-type conjugal transfer protein TraN | - |
| CYL23_RS23580 () | 67014..67706 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| CYL23_RS23585 () | 67703..68050 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| CYL23_RS23590 () | 68068..71835 | - | 3768 | WP_006855639.1 | DNA primase SogL | - |
| CYL23_RS23595 () | 71925..72476 | - | 552 | WP_000014584.1 | phospholipase D family protein | - |
| CYL23_RS23600 () | 72491..72781 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| CYL23_RS23605 () | 72778..73926 | - | 1149 | WP_001024976.1 | plasmid transfer ATPase TraJ | - |
| CYL23_RS23610 () | 73923..74741 | - | 819 | WP_000646097.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| CYL23_RS23615 () | 74738..75196 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| CYL23_RS23620 () | 75591..76175 | - | 585 | WP_000977520.1 | histidine phosphatase family protein | - |
| CYL23_RS23625 () | 76235..77437 | - | 1203 | WP_000976357.1 | conjugal transfer protein TraF | - |
| CYL23_RS23630 () | 77523..77837 | - | 315 | Protein_84 | thick pilus protein | - |
| CYL23_RS23635 () | 77889..78593 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| CYL23_RS23640 () | 78630..78878 | - | 249 | WP_006855635.1 | hypothetical protein | - |
| CYL23_RS23645 () | 79029..80183 | - | 1155 | WP_001139955.1 | integrase | - |
| CYL23_RS23660 () | 80928..81104 | - | 177 | WP_096040819.1 | shufflon protein C' | - |
| CYL23_RS23675 () | 81934..83025 | - | 1092 | Protein_89 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| CYL23_RS23680 () | 83025..83681 | - | 657 | WP_001193551.1 | prepilin peptidase | - |
| CYL23_RS23685 () | 83666..84226 | - | 561 | WP_000014005.1 | lytic transglycosylase domain-containing protein | - |
| CYL23_RS23690 () | 84236..84850 | - | 615 | WP_000908228.1 | hypothetical protein | - |
| CYL23_RS23695 () | 84867..85952 | - | 1086 | WP_001208803.1 | type II secretion system F family protein | - |
| CYL23_RS23700 () | 85965..87518 | - | 1554 | WP_000362204.1 | Flp pilus assembly complex ATPase component TadA | - |
| CYL23_RS23705 () | 87529..87981 | - | 453 | WP_001247333.1 | type IV pilus biogenesis protein PilP | - |
| CYL23_RS23710 () | 87968..89263 | - | 1296 | WP_000752776.1 | type 4b pilus protein PilO2 | - |
| CYL23_RS23715 () | 89256..90938 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| CYL23_RS23720 () | 90952..91389 | - | 438 | WP_000539811.1 | type IV pilus biogenesis protein PilM | - |
| CYL23_RS23725 () | 91389..92456 | - | 1068 | WP_001442752.1 | type IV pilus biogenesis lipoprotein PilL | - |
| CYL23_RS23735 () | 93208..93462 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| CYL23_RS23745 () | 93634..94317 | - | 684 | WP_000213863.1 | hypothetical protein | - |
| CYL23_RS23755 () | 94571..95104 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| CYL23_RS23765 () | 95546..95833 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| CYL23_RS23770 () | 95751..96014 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|