MGE detailed information
MGE type: Genomic_island MGE length: 58223 bp
Accession: NZ_CP025401 Location: 4748042..4806264 Organism: Escherichia coli strain MS8345 Replicon: chromosome
Accession: NZ_CP025401 Location: 4748042..4806264 Organism: Escherichia coli strain MS8345 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MS8345_RS24725 () | 4744448..4745167 | - | 720 | WP_000611291.1 | two-component system response regulator DcuR | - |
| MS8345_RS24730 () | 4745164..4746795 | - | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| MS8345_RS24735 () | 4746976..4747206 | + | 231 | WP_000373293.1 | (4Fe-4S)-binding protein | - |
| MS8345_RS24740 () | 4747218..4747490 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| MS8345_RS24745 () | 4747718..4748014 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| MS8345_RS24750 () | 4748042..4748215 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| MS8345_RS24755 () | 4748334..4749851 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| MS8345_RS24760 () | 4750088..4751545 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| MS8345_RS24765 () | 4751604..4753751 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| MS8345_RS24770 () | 4753831..4755165 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| MS8345_RS24780 () | 4755531..4757069 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| MS8345_RS24790 () | 4757904..4758464 | - | 561 | Protein_4550 | DUF4942 domain-containing protein | - |
| MS8345_RS24795 () | 4758549..4758746 | - | 198 | WP_085949158.1 | DUF957 domain-containing protein | - |
| MS8345_RS24800 () | 4758774..4758971 | - | 198 | Protein_4552 | hypothetical protein | - |
| MS8345_RS24805 () | 4758968..4759111 | - | 144 | Protein_4553 | toxin | - |
| MS8345_RS24810 () | 4759152..4760365 | + | 1214 | WP_139371347.1 | IS3 family transposase IS629 | Transposase |
| MS8345_RS24815 () | 4760368..4760658 | - | 291 | WP_016239155.1 | TA system toxin CbtA family protein | Toxin Detail |
| MS8345_RS24820 () | 4760747..4761115 | - | 369 | WP_001285610.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| MS8345_RS24825 () | 4761195..4761416 | - | 222 | WP_000692347.1 | DUF987 domain-containing protein | - |
| MS8345_RS24830 () | 4761503..4761979 | - | 477 | WP_001186193.1 | RadC family protein | - |
| MS8345_RS24835 () | 4761994..4762473 | - | 480 | WP_000706978.1 | antirestriction protein | - |
| MS8345_RS24840 () | 4762739..4763557 | - | 819 | WP_001175155.1 | DUF945 domain-containing protein | - |
| MS8345_RS24845 () | 4763647..4763880 | - | 234 | WP_000883181.1 | DUF905 family protein | - |
| MS8345_RS24850 () | 4763886..4764563 | - | 678 | WP_001097565.1 | hypothetical protein | - |
| MS8345_RS24855 () | 4764714..4765394 | - | 681 | WP_001278649.1 | WYL domain-containing protein | - |
| MS8345_RS24860 () | 4765597..4766481 | - | 885 | WP_001116794.1 | 50S ribosome-binding GTPase | - |
| MS8345_RS24870 () | 4766582..4767805 | + | 1224 | WP_001107219.1 | hypothetical protein | - |
| MS8345_RS24875 () | 4769258..4769989 | + | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| MS8345_RS24880 () | 4770336..4770911 | + | 576 | WP_000991593.1 | hypothetical protein | - |
| MS8345_RS24885 () | 4770980..4771213 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| MS8345_RS24890 () | 4771225..4771450 | + | 226 | Protein_4569 | hypothetical protein | - |
| MS8345_RS24895 () | 4771512..4771778 | - | 267 | Protein_4570 | IS3 family transposase IS2 | Transposase |
| MS8345_RS24900 () | 4771869..4773026 | + | 1158 | Protein_4571 | Multidrug resistance protein MexB | VF |
| MS8345_RS30130 () | 4773147..4773797 | + | 651 | Protein_4572 | TetR/AcrR family transcriptional regulator | - |
| MS8345_RS29885 () | 4773769..4774114 | + | 346 | Protein_4573 | Regulatory protein SoxS | VF |
| MS8345_RS24920 () | 4774472..4775017 | - | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| MS8345_RS24925 () | 4775062..4776213 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| MS8345_RS24930 () | 4776342..4777397 | - | 1056 | WP_000494233.1 | HTH-type transcriptional activator Btr | VF |
| MS8345_RS24935 () | 4777414..4778676 | - | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| MS8345_RS24945 () | 4779226..4779819 | - | 594 | Protein_4578 | maturase | - |
| MS8345_RS24950 () | 4779819..4780188 | - | 370 | Protein_4579 | reverse transcriptase/maturase | - |
| MS8345_RS24960 () | 4780800..4781705 | - | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| MS8345_RS24965 () | 4781842..4782759 | - | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| MS8345_RS24970 () | 4782868..4785420 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| MS8345_RS24975 () | 4785469..4786044 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| MS8345_RS24980 () | 4786055..4786354 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| MS8345_RS24985 () | 4786378..4787895 | - | 1518 | WP_000997839.1 | Aldehyde-alcohol dehydrogenase | VF |
| MS8345_RS24990 () | 4787956..4788741 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| MS8345_RS24995 () | 4788763..4789044 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| MS8345_RS25000 () | 4789329..4790525 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| MS8345_RS25005 () | 4790554..4791051 | - | 498 | WP_001332069.1 | propanediol utilization system heme-binding protein GrpF | - |
| MS8345_RS25010 () | 4791079..4791348 | - | 270 | WP_000280292.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| MS8345_RS25015 () | 4791360..4792085 | - | 726 | WP_002430742.1 | propanediol utilization system flavoprotein GrpD | - |
| MS8345_RS25020 () | 4792069..4792827 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| MS8345_RS25025 () | 4792882..4793568 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| MS8345_RS25030 () | 4793708..4794826 | - | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| MS8345_RS25035 () | 4795177..4795676 | + | 500 | Protein_4595 | DNA-binding protein | - |
| MS8345_RS25040 () | 4795772..4796005 | + | 234 | WP_000124175.1 | hypothetical protein | - |
| MS8345_RS25045 () | 4796058..4796249 | - | 192 | WP_001287878.1 | DUF4222 domain-containing protein | - |
| MS8345_RS25050 () | 4796911..4797279 | + | 369 | WP_001350801.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| MS8345_RS25055 () | 4797249..4797749 | + | 501 | WP_072145580.1 | type VI secretion protein ImpA | - |
| MS8345_RS25060 () | 4797988..4799109 | + | 1122 | WP_033556416.1 | hypothetical protein | - |
| MS8345_RS25065 () | 4799241..4801025 | + | 1785 | WP_000269403.1 | KAP family P-loop domain protein | - |
| MS8345_RS25070 () | 4801025..4801777 | + | 753 | WP_000537317.1 | hypothetical protein | - |
| MS8345_RS25075 () | 4801759..4803078 | + | 1320 | WP_000508958.1 | hypothetical protein | - |
| MS8345_RS25080 () | 4803075..4803800 | + | 726 | WP_000020778.1 | TatD family hydrolase | - |
| MS8345_RS25090 () | 4804353..4804928 | - | 576 | WP_001514083.1 | SLATT domain-containing protein | - |
| MS8345_RS25095 () | 4804936..4806264 | - | 1329 | WP_000019624.1 | nucleotidyltransferase | - |
| MS8345_RS25100 () | 4806399..4806584 | - | 186 | Protein_4607 | transposase domain-containing protein | - |
| MS8345_RS25105 () | 4806605..4807761 | - | 1157 | Protein_4608 | IS3 family transposase | - |
| MS8345_RS25110 () | 4807831..4808178 | - | 348 | WP_000477079.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| MS8345_RS25120 () | 4808796..4809489 | - | 694 | Protein_4610 | IS1 family transposase | - |
| MS8345_RS25125 () | 4809742..4811211 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|