MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 172310 bp
Accession: NZ_CP025401        Location: 3289303..3461612         Organism: Escherichia coli strain MS8345       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
MS8345_RS17175 () 3284368..3284715 - 348 WP_000679427.1 quaternary ammonium compound efflux SMR transporter QacE delta 1 -
MS8345_RS17180 () 3284879..3285670 - 792 WP_024198294.1 ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA22 -
MS8345_RS17185 () 3285819..3286145 + 327 Protein_3180 class 1 integron integrase IntI1 -
MS8345_RS17190 () 3286188..3287720 + 1533 WP_013362816.1 IS91 family transposase -
MS8345_RS17200 () 3288054..3288149 + 96 WP_013362819.1 23S rRNA methyltransferase attenuation leader peptide -
MS8345_RS17205 () 3288275..3289012 + 738 WP_013362818.1 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) -
MS8345_RS30100 () 3288957..3289127 + 171 WP_170852050.1 rRNA adenine methyltransferase -
MS8345_RS17215 () 3289642..3290091 + 450 WP_013362817.1 hypothetical protein -
MS8345_RS30105 () 3290052..3290393 + 342 WP_023909256.1 60 kDa chaperonin 2 VF
MS8345_RS17225 () 3290620..3291483 + 864 Protein_3187 IS91 family transposase ISPps1 Transposase
MS8345_RS17235 () 3291589..3291933 + 345 WP_000166949.1 ProQ/FinO family protein -
MS8345_RS17240 () 3291952..3292500 - 549 WP_001167427.1 hypothetical protein -
MS8345_RS17245 () 3292769..3293002 - 234 WP_101408934.1 AlpA family transcriptional regulator -
MS8345_RS29845 () 3293026..3293643 - 618 WP_157830611.1 hypothetical protein -
MS8345_RS17255 () 3293889..3294455 - 567 WP_101408935.1 inovirus-type Gp2 protein -
MS8345_RS17260 () 3296018..3297621 - 1604 Protein_3193 DUF3987 domain-containing protein -
MS8345_RS17265 () 3298054..3298710 + 657 Protein_3194 transposase -
MS8345_RS17270 () 3298804..3299535 - 732 WP_001075484.1 inovirus Gp2 family protein -
MS8345_RS17280 () 3301054..3302184 - 1131 WP_000147748.1 hypothetical protein -
MS8345_RS17285 () 3302369..3303253 + 885 WP_000010402.1 50S ribosome-binding GTPase -
MS8345_RS17290 () 3303456..3304136 + 681 Protein_3198 WYL domain-containing protein -
MS8345_RS17295 () 3304284..3304961 + 678 WP_001097369.1 hypothetical protein -
MS8345_RS17300 () 3304967..3305200 + 234 WP_001278282.1 DUF905 family protein -
MS8345_RS17310 () 3305290..3306106 + 817 Protein_3201 DUF932 domain-containing protein -
MS8345_RS17315 () 3306183..3306668 + 486 WP_000213705.1 antirestriction protein -
MS8345_RS17325 () 3306684..3307160 + 477 WP_001186715.1 RadC family protein -
MS8345_RS17330 () 3307229..3307450 + 222 WP_000692345.1 DUF987 domain-containing protein -
MS8345_RS17335 () 3307469..3308113 + 645 WP_000086770.1 hypothetical protein -
MS8345_RS17340 () 3308163..3308531 + 369 WP_001285113.1 type IV toxin-antitoxin system YeeU family antitoxin Antitoxin Detail
MS8345_RS17345 () 3308621..3308998 + 378 WP_023180999.1 TA system toxin CbtA family protein Toxin Detail
MS8345_RS17350 () 3308995..3309483 + 489 WP_000761678.1 hypothetical protein -
MS8345_RS17355 () 3309495..3309692 + 198 WP_000839240.1 DUF957 domain-containing protein -
MS8345_RS17360 () 3309777..3310642 + 866 Protein_3210 DUF4942 domain-containing protein -
MS8345_RS17365 () 3310714..3310977 + 264 WP_001143297.1 type II toxin-antitoxin system ParD family antitoxin -
MS8345_RS17370 () 3310974..3311300 + 327 WP_000779483.1 type II toxin-antitoxin system RelE/ParE family toxin -
MS8345_RS17375 () 3311763..3313025 + 1263 WP_001218820.1 Prophage integrase IntS ; Integrase Integrase
MS8345_RS17385 () 3313477..3316992 + 3516 WP_000344091.1 ATP-binding protein -
MS8345_RS17390 () 3317101..3318600 - 1500 WP_001026222.1 phosphoethanolamine transferase -
MS8345_RS17395 () 3318775..3319521 - 747 WP_001350744.1 porin family protein -
MS8345_RS17405 () 3319881..3320891 - 1011 WP_000758687.1 Fimbrial adhesin PapG VF
MS8345_RS17410 () 3320935..3321435 - 501 WP_000620429.1 Minor fimbrial protein PrsF VF
MS8345_RS17415 () 3321510..3322031 - 522 WP_000723802.1 Fimbrial protein PapE VF
MS8345_RS17420 () 3322058..3322594 - 537 WP_000597712.1 Fimbrial adapter PapK VF
MS8345_RS17425 () 3322604..3323185 - 582 WP_000261303.1 hypothetical protein VF
MS8345_RS17430 () 3323222..3323956 - 735 WP_000265730.1 Chaperone protein PapD VF
MS8345_RS17435 () 3324027..3326537 - 2511 WP_000654934.1 Outer membrane usher protein PapC VF
MS8345_RS17440 () 3326596..3327183 - 588 WP_001350743.1 PAP fimbrial minor pilin protein VF
MS8345_RS17445 () 3327246..3327794 - 549 WP_001513962.1 Pap fimbrial major pilin protein VF
MS8345_RS17450 () 3328001..3328315 - 315 WP_000930062.1 Major pilu subunit operon regulatory protein PapB VF
MS8345_RS17465 () 3328747..3328980 + 234 WP_000006207.1 P fimbrial regulatory protein KS71A VF
MS8345_RS17470 () 3329323..3329559 - 237 WP_016239321.1 AlpA family transcriptional regulator -
MS8345_RS17475 () 3329628..3330203 - 576 WP_000991571.1 hypothetical protein -
MS8345_RS17480 () 3330461..3331027 - 567 WP_001126806.1 inovirus-type Gp2 protein -
MS8345_RS17485 () 3331235..3332442 + 1208 Protein_3231 IS3 family transposase ISEc48 Transposase
MS8345_RS17490 () 3332477..3332842 - 366 WP_000639467.1 hypothetical protein -
MS8345_RS17495 () 3332885..3334249 - 1365 WP_000948756.1 Phosphoglycerate transporter protein VF
MS8345_RS17500 () 3334648..3335865 + 1218 WP_001363624.1 phosphoglycerate transport regulator PgtC -
MS8345_RS17505 () 3335862..3337871 + 2010 WP_000790446.1 two-component system sensor histidine kinase PgtB -
MS8345_RS17510 () 3337861..3339108 + 1248 WP_001350739.1 two-component system response regulator PgtA -
MS8345_RS17515 () 3339355..3339468 + 114 Protein_3237 hypothetical protein -
MS8345_RS30110 () 3339500..3339592 + 93 Protein_3238 ATP-dependent helicase -
MS8345_RS17520 () 3339701..3340024 - 324 WP_015953064.1 hypothetical protein -
MS8345_RS17535 () 3341351..3342563 + 1213 Protein_3241 IS256 family transposase -
MS8345_RS17540 () 3342743..3344791 - 2049 WP_000792544.1 TonB-dependent siderophore receptor IreA -
MS8345_RS17550 () 3345573..3346313 - 741 WP_001075450.1 inovirus Gp2 family protein -
MS8345_RS29850 () 3346418..3346666 + 249 WP_000573217.1 hypothetical protein -
MS8345_RS17560 () 3348005..3348793 + 789 WP_016239324.1 hypothetical protein -
MS8345_RS17565 () 3348790..3349740 - 951 WP_000157734.1 hypothetical protein -
MS8345_RS17570 () 3349846..3350730 + 885 WP_083574934.1 50S ribosome-binding GTPase -
MS8345_RS17575 () 3350772..3351227 + 456 Protein_3248 WYL domain-containing protein -
MS8345_RS17580 () 3351375..3352052 + 678 WP_001097312.1 hypothetical protein -
MS8345_RS17585 () 3352058..3352291 + 234 WP_001278287.1 DUF905 family protein -
MS8345_RS17590 () 3352381..3353199 + 819 WP_001175142.1 DUF945 domain-containing protein -
MS8345_RS17595 () 3353290..3353775 + 486 WP_000860054.1 antirestriction protein -
MS8345_RS17605 () 3353790..3354266 + 477 WP_001186756.1 RadC family protein -
MS8345_RS17610 () 3354335..3354556 + 222 WP_000692312.1 DUF987 domain-containing protein -
MS8345_RS17615 () 3354635..3355012 + 378 WP_015953067.1 type IV toxin-antitoxin system toxin CbtA Antitoxin Detail
MS8345_RS17620 () 3355059..3355436 + 378 WP_001094436.1 TA system toxin CbtA family protein Toxin Detail
MS8345_RS17625 () 3355433..3355921 + 489 WP_000761714.1 hypothetical protein -
MS8345_RS17630 () 3355933..3356130 + 198 WP_000839254.1 DUF957 domain-containing protein -
MS8345_RS17635 () 3356215..3357060 + 846 WP_001280513.1 DUF4942 domain-containing protein -
MS8345_RS17640 () 3357131..3358666 + 1536 WP_083574935.1 Cyclic di-GMP phosphodiesterase PdeL VF
MS8345_RS17645 () 3359063..3359233 + 171 Protein_3261 IS110 family transposase ISEc32 Transposase
MS8345_RS17650 () 3360043..3361026 + 984 WP_001331698.1 Arabinose 5-phosphate isomerase KpsF VF
MS8345_RS17655 () 3361098..3362246 + 1149 WP_000905916.1 hypothetical protein VF
MS8345_RS17660 () 3362270..3363946 + 1677 WP_001331697.1 Polysialic acid transport protein KpsD VF
MS8345_RS17665 () 3363956..3364696 + 741 WP_000030755.1 3-deoxy-manno-octulosonate cytidylyltransferase VF
MS8345_RS17670 () 3364693..3366720 + 2028 WP_000579525.1 hypothetical protein VF
MS8345_RS17675 () 3366755..3367960 + 1206 WP_001161829.1 hypothetical protein VF
MS8345_RS17680 () 3368110..3369339 - 1230 WP_000575410.1 hypothetical protein VF
MS8345_RS17685 () 3369329..3370477 - 1149 WP_000197083.1 hypothetical protein VF
MS8345_RS17690 () 3370470..3371645 - 1176 WP_000723250.1 Polysialic acid biosynthesis protein P7 VF
MS8345_RS17695 () 3371642..3372898 - 1257 WP_001259305.1 N-acylneuraminate cytidylyltransferase VF
MS8345_RS17700 () 3372898..3373938 - 1041 WP_000066003.1 N,N'-diacetyllegionaminic acid synthase VF
MS8345_RS17705 () 3373935..3374558 - 624 WP_000038461.1 Putative acetyltransferase EpsM VF
MS8345_RS17710 () 3374608..3375267 - 660 WP_000590258.1 Polysialic acid transport ATP-binding protein KpsT VF
MS8345_RS17715 () 3375264..3376040 - 777 WP_000124301.1 Polysialic acid transport protein KpsM VF
MS8345_RS17720 () 3377098..3377634 - 537 WP_000942829.1 Type II secretion system protein M VF
MS8345_RS17725 () 3377636..3378814 - 1179 WP_000097208.1 Type II secretion system protein L VF
MS8345_RS17730 () 3378811..3379788 - 978 WP_000633202.1 Putative type II secretion system protein K VF
MS8345_RS17735 () 3379785..3380390 - 606 WP_001331694.1 Type II secretion system protein J VF
MS8345_RS17740 () 3380387..3380758 - 372 WP_000820096.1 Type II secretion system protein I VF
MS8345_RS17745 () 3380755..3381318 - 564 WP_001115118.1 Type II secretion system protein H VF
MS8345_RS17750 () 3381322..3381777 - 456 WP_001087289.1 Type II secretion system protein G VF
MS8345_RS17755 () 3381794..3383017 - 1224 WP_001173408.1 Type II secretion system protein F VF
MS8345_RS17760 () 3383017..3384510 - 1494 WP_000249340.1 Type II secretion system protein E VF
MS8345_RS17765 () 3384510..3386570 - 2061 WP_001350731.1 Type II secretion system protein D VF
MS8345_RS17770 () 3386600..3387559 - 960 WP_001350730.1 Type II secretion system protein C VF
MS8345_RS17775 () 3387577..3387987 - 411 WP_001298257.1 type II secretion system pilot lipoprotein GspS-beta -
MS8345_RS17780 () 3388053..3388862 - 810 WP_000895874.1 Leader peptidase PppA VF
MS8345_RS17790 () 3389026..3393588 - 4563 WP_001034562.1 hypothetical protein VF
MS8345_RS17800 () 3394072..3395754 - 1683 WP_000259302.1 glycolate permease GlcA -
MS8345_RS17805 () 3396110..3398281 - 2172 WP_000084100.1 malate synthase G -
MS8345_RS17810 () 3398303..3398707 - 405 WP_000853256.1 protein GlcG -
MS8345_RS17815 () 3398712..3399935 - 1224 WP_001194819.1 glycolate oxidase subunit GlcF -
MS8345_RS17820 () 3399946..3400998 - 1053 WP_000943075.1 glycolate oxidase subunit GlcE -
MS8345_RS17825 () 3400998..3402497 - 1500 WP_000026154.1 glycolate oxidase subunit GlcD -
MS8345_RS17830 () 3402748..3403512 + 765 WP_001314155.1 transcriptional regulator GlcC -
MS8345_RS17835 () 3403519..3404661 - 1143 WP_001331688.1 DNA-binding protein -
MS8345_RS17845 () 3405032..3406756 + 1725 WP_207231477.1 Long-chain-fatty-acid--AMP ligase FadD26 VF
MS8345_RS17850 () 3406753..3407667 + 915 WP_001077159.1 NAD-dependent epimerase/dehydratase family protein -
MS8345_RS17855 () 3407699..3407947 + 249 WP_000248098.1 acyl carrier protein -
MS8345_RS17860 () 3407947..3409119 + 1173 WP_016239329.1 8-amino-7-oxononanoate synthase VF
MS8345_RS17865 () 3409154..3410233 - 1080 WP_001331686.1 LPS export ABC transporter permease LptG -
MS8345_RS17870 () 3410230..3411300 - 1071 WP_000779629.1 LPS export ABC transporter permease LptF -
MS8345_RS17875 () 3411331..3411891 - 561 WP_001141149.1 YtfJ family protein -
MS8345_RS17880 () 3411891..3412727 - 837 WP_000984967.1 hypothetical protein -
MS8345_RS17885 () 3412727..3414076 - 1350 WP_000257922.1 lipopolysaccharide biosynthesis protein -
MS8345_RS17890 () 3414122..3414880 - 759 WP_001445422.1 hypothetical protein -
MS8345_RS17895 () 3414912..3415625 - 714 WP_001076282.1 thymidylate kinase -
MS8345_RS17900 () 3415800..3416492 + 693 WP_001190683.1 thymidylate kinase -
MS8345_RS17905 () 3416541..3418040 - 1500 WP_000933275.1 inorganic phosphate transporter PitB -
MS8345_RS17910 () 3418332..3420191 - 1860 WP_001331684.1 bifunctional glutathionylspermidine amidase/synthase -
MS8345_RS17915 () 3420396..3421262 + 867 WP_001331683.1 glutathione-dependent disulfide-bond oxidoreductase -
MS8345_RS17920 () 3421395..3421643 - 249 WP_000334896.1 hydrogenase maturation factor HybG -
MS8345_RS17925 () 3421656..3421997 - 342 WP_000544952.1 hydrogenase maturation nickel metallochaperone HypA -
MS8345_RS17930 () 3421990..3422478 - 489 WP_000134031.1 hydrogenase-2 assembly chaperone -
MS8345_RS17935 () 3422471..3422965 - 495 WP_001221940.1 HyaD/HybD family hydrogenase maturation endopeptidase -
MS8345_RS17940 () 3422965..3424668 - 1704 WP_000083065.1 hydrogenase 2 large subunit -
MS8345_RS17945 () 3424665..3425843 - 1179 WP_000017687.1 Ni/Fe-hydrogenase cytochrome b subunit -
MS8345_RS17950 () 3425833..3426819 - 987 WP_001081868.1 hydrogenase 2 operon protein HybA -
MS8345_RS17955 () 3426822..3427940 - 1119 WP_000145410.1 hydrogenase 2 small subunit -
MS8345_RS17965 () 3428129..3428416 - 288 WP_001059136.1 DUF2623 domain-containing protein -
MS8345_RS17970 () 3428535..3429422 - 888 WP_001350729.1 dienelactone hydrolase family protein -
MS8345_RS17975 () 3429579..3430619 + 1041 WP_000262190.1 L-glyceraldehyde 3-phosphate reductase -
MS8345_RS17980 () 3430659..3431153 - 495 WP_000439331.1 TIGR00645 family protein -
MS8345_RS17985 () 3431344..3432228 + 885 WP_000018758.1 putative oxidoreductase YghA VF
MS8345_RS17990 () 3432267..3432692 - 426 WP_001240712.1 TonB system transport protein ExbD -
MS8345_RS17995 () 3432699..3433433 - 735 WP_000527844.1 tol-pal system-associated acyl-CoA thioesterase -
MS8345_RS18005 () 3433685..3434872 + 1188 WP_000763935.1 cystathionine beta-lyase -
MS8345_RS18010 () 3435012..3435671 + 660 WP_000268419.1 DedA family protein -
MS8345_RS18015 () 3435711..3436610 - 900 WP_001298382.1 DNA-binding transcriptional regulator YqhC -
MS8345_RS18020 () 3436804..3437967 + 1164 WP_001058819.1 alcohol dehydrogenase -
MS8345_RS18025 () 3438072..3438899 + 828 WP_000013152.1 2,5-didehydrogluconate reductase DkgA -
MS8345_RS18030 () 3439099..3440025 + 927 WP_000691616.1 YbjP/YqhG family protein -
MS8345_RS18035 () 3440076..3440333 + 258 WP_000848521.1 lipoprotein YqhH -
MS8345_RS18040 () 3440375..3442594 - 2220 WP_000095186.1 YgiQ family radical SAM protein -
MS8345_RS18045 () 3442846..3443595 + 750 WP_000438655.1 FadR family transcriptional regulator -
MS8345_RS18050 () 3443918..3445390 + 1473 WP_001331680.1 mannitol dehydrogenase family protein -
MS8345_RS18055 () 3445387..3446403 + 1017 WP_000853926.1 zinc-binding alcohol dehydrogenase family protein -
MS8345_RS18060 () 3446414..3447424 + 1011 WP_000214536.1 putative oxidoreductase YjmC VF
MS8345_RS18065 () 3447497..3448480 + 984 WP_000645959.1 TRAP transporter substrate-binding protein -
MS8345_RS18070 () 3448522..3449004 + 483 WP_001259754.1 TRAP transporter small permease -
MS8345_RS18075 () 3449015..3450319 + 1305 WP_001298381.1 TRAP transporter large permease subunit -
MS8345_RS18080 () 3450390..3451802 - 1413 WP_000059395.1 cell division protein FtsP -
MS8345_RS18085 () 3451877..3452614 - 738 WP_000965712.1 1-acylglycerol-3-phosphate O-acyltransferase -
MS8345_RS18090 () 3452849..3455107 - 2259 WP_080282702.1 DNA topoisomerase IV subunit A -
MS8345_RS18095 () 3455245..3456852 - 1608 WP_001350728.1 ABC transporter substrate-binding protein -
MS8345_RS18100 () 3456961..3457443 - 483 WP_000183493.1 GyrI-like domain-containing protein -
MS8345_RS18105 () 3457496..3457888 - 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
MS8345_RS18110 () 3458040..3458699 + 660 WP_001221493.1 Transcriptional regulatory protein QseB VF
MS8345_RS18115 () 3458696..3460045 + 1350 WP_000673382.1 two-component system sensor histidine kinase QseC -
MS8345_RS18120 () 3460091..3460423 - 333 WP_000914696.1 DUF2645 family protein -
MS8345_RS18125 () 3460430..3461622 - 1193 Protein_3352 Hcp family type VI secretion system effector -
MS8345_RS18130 () 3461872..3462453 + 582 WP_000065430.1 NADPH:quinone oxidoreductase MdaB -
MS8345_RS18135 () 3462484..3462798 + 315 WP_000633738.1 antibiotic biosynthesis monooxygenase -
MS8345_RS18140 () 3462843..3463730 - 888 WP_000614943.1 MurR/RpiR family transcriptional regulator -
MS8345_RS18145 () 3463727..3464674 - 948 WP_001296418.1 iron-siderophore ABC transporter substrate-binding protein -
MS8345_RS18150 () 3464685..3465722 - 1038 WP_001298372.1 iron ABC transporter permease -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance