MGE detailed information
MGE type: Genomic_island MGE length: 72749 bp
Accession: NZ_CP025328 Location: 4765392..4838140 Organism: Escherichia coli strain ExPEC XM Replicon: chromosome
Accession: NZ_CP025328 Location: 4765392..4838140 Organism: Escherichia coli strain ExPEC XM Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXG97_RS24705 () | 4761798..4762517 | - | 720 | WP_000611291.1 | two-component system response regulator DcuR | - |
| CXG97_RS24710 () | 4762514..4764145 | - | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| CXG97_RS24715 () | 4764326..4764556 | + | 231 | WP_000373293.1 | (4Fe-4S)-binding protein | - |
| CXG97_RS24720 () | 4764568..4764840 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| CXG97_RS24725 () | 4765068..4765364 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| CXG97_RS24730 () | 4765392..4765565 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| CXG97_RS24735 () | 4765684..4767201 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| CXG97_RS24740 () | 4767438..4768895 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| CXG97_RS24745 () | 4768954..4771101 | - | 2148 | WP_101356990.1 | lysine decarboxylase CadA | - |
| CXG97_RS24750 () | 4771181..4772515 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CXG97_RS24760 () | 4772881..4774419 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CXG97_RS24770 () | 4775254..4775814 | - | 561 | Protein_4550 | DUF4942 domain-containing protein | - |
| CXG97_RS24775 () | 4775899..4776096 | - | 198 | WP_085949158.1 | DUF957 domain-containing protein | - |
| CXG97_RS24780 () | 4776124..4776321 | - | 198 | Protein_4552 | hypothetical protein | - |
| CXG97_RS24785 () | 4776318..4776695 | - | 378 | WP_000854820.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| CXG97_RS24790 () | 4776784..4777152 | - | 369 | WP_001285610.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CXG97_RS24795 () | 4777232..4777453 | - | 222 | WP_000692347.1 | DUF987 domain-containing protein | - |
| CXG97_RS24800 () | 4777540..4778016 | - | 477 | WP_001186193.1 | RadC family protein | - |
| CXG97_RS24805 () | 4778031..4778510 | - | 480 | WP_000706978.1 | antirestriction protein | - |
| CXG97_RS29030 () | 4778610..4778750 | + | 141 | WP_000997937.1 | hypothetical protein | - |
| CXG97_RS24810 () | 4778776..4779594 | - | 819 | WP_001175155.1 | DUF945 domain-containing protein | - |
| CXG97_RS24815 () | 4779684..4779917 | - | 234 | WP_000883181.1 | DUF905 family protein | - |
| CXG97_RS24820 () | 4779923..4780600 | - | 678 | WP_001097565.1 | hypothetical protein | - |
| CXG97_RS24825 () | 4780751..4781431 | - | 681 | WP_001278649.1 | WYL domain-containing protein | - |
| CXG97_RS24830 () | 4781634..4782518 | - | 885 | WP_001116794.1 | 50S ribosome-binding GTPase | - |
| CXG97_RS24840 () | 4782619..4783842 | + | 1224 | WP_001107219.1 | hypothetical protein | - |
| CXG97_RS24845 () | 4785295..4786026 | + | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| CXG97_RS24850 () | 4786373..4786948 | + | 576 | WP_000991593.1 | hypothetical protein | - |
| CXG97_RS24855 () | 4787017..4787250 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| CXG97_RS24860 () | 4787262..4787487 | + | 226 | Protein_4568 | hypothetical protein | - |
| CXG97_RS24865 () | 4787549..4787815 | - | 267 | Protein_4569 | IS3 family transposase IS2 | Transposase |
| CXG97_RS24870 () | 4787906..4789063 | + | 1158 | Protein_4570 | Multidrug resistance protein MexB | VF |
| CXG97_RS29035 () | 4789184..4789833 | + | 650 | Protein_4571 | TetR/AcrR family transcriptional regulator | - |
| CXG97_RS28790 () | 4789805..4790150 | + | 346 | Protein_4572 | helix-turn-helix domain-containing protein | - |
| CXG97_RS24890 () | 4790507..4791052 | - | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| CXG97_RS24895 () | 4791097..4792248 | - | 1152 | WP_001001005.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| CXG97_RS24900 () | 4792377..4793432 | - | 1056 | WP_000494233.1 | HTH-type transcriptional activator Btr | VF |
| CXG97_RS24905 () | 4793449..4794711 | - | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| CXG97_RS24915 () | 4795261..4795854 | - | 594 | Protein_4577 | maturase | - |
| CXG97_RS24920 () | 4795854..4796223 | - | 370 | Protein_4578 | reverse transcriptase/maturase | - |
| CXG97_RS24930 () | 4796835..4797740 | - | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| CXG97_RS24935 () | 4797877..4798794 | - | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| CXG97_RS24940 () | 4798903..4801455 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| CXG97_RS24945 () | 4801504..4802079 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| CXG97_RS24950 () | 4802090..4802389 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| CXG97_RS24955 () | 4802413..4803930 | - | 1518 | WP_000997839.1 | Aldehyde-alcohol dehydrogenase | VF |
| CXG97_RS24960 () | 4803991..4804776 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| CXG97_RS24965 () | 4804798..4805079 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| CXG97_RS24970 () | 4805364..4806560 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| CXG97_RS24975 () | 4806589..4807086 | - | 498 | WP_001332069.1 | propanediol utilization system heme-binding protein GrpF | - |
| CXG97_RS24980 () | 4807114..4807383 | - | 270 | WP_000280292.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| CXG97_RS24985 () | 4807395..4808120 | - | 726 | WP_002430742.1 | propanediol utilization system flavoprotein GrpD | - |
| CXG97_RS24990 () | 4808104..4808861 | - | 758 | Protein_4591 | propanediol utilization system chaperone GrpC | - |
| CXG97_RS24995 () | 4808916..4809602 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| CXG97_RS25000 () | 4809742..4810860 | - | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| CXG97_RS25005 () | 4811211..4811710 | + | 500 | Protein_4594 | DNA-binding protein | - |
| CXG97_RS25010 () | 4811805..4812038 | + | 234 | WP_000124175.1 | hypothetical protein | - |
| CXG97_RS25015 () | 4812091..4812282 | - | 192 | WP_001287878.1 | DUF4222 domain-containing protein | - |
| CXG97_RS25020 () | 4812944..4813312 | + | 369 | WP_001350801.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| CXG97_RS25025 () | 4813282..4813782 | + | 501 | WP_072145580.1 | type VI secretion protein ImpA | - |
| CXG97_RS25030 () | 4814021..4815367 | + | 1347 | WP_157829386.1 | hypothetical protein | - |
| CXG97_RS25040 () | 4815499..4817282 | + | 1784 | Protein_4600 | KAP family P-loop domain protein | - |
| CXG97_RS25045 () | 4817282..4818034 | + | 753 | WP_000537317.1 | hypothetical protein | - |
| CXG97_RS25050 () | 4818016..4819335 | + | 1320 | WP_000508958.1 | hypothetical protein | - |
| CXG97_RS25055 () | 4819332..4820057 | + | 726 | WP_000020778.1 | TatD family hydrolase | - |
| CXG97_RS25065 () | 4820610..4821185 | - | 576 | WP_000194395.1 | SLATT domain-containing protein | - |
| CXG97_RS25070 () | 4821193..4822521 | - | 1329 | WP_000019624.1 | nucleotidyltransferase | - |
| CXG97_RS25075 () | 4822656..4822841 | - | 186 | Protein_4606 | IS66 family transposase IS682 | Transposase |
| CXG97_RS25080 () | 4822862..4824018 | - | 1157 | Protein_4607 | IS3 family transposase | - |
| CXG97_RS25085 () | 4824088..4824435 | - | 348 | WP_000477079.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| CXG97_RS25095 () | 4825053..4825746 | - | 694 | Protein_4609 | IS1 family transposase IS1N | Transposase |
| CXG97_RS25100 () | 4825999..4827468 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| CXG97_RS25105 () | 4827573..4829942 | + | 2370 | WP_000671170.1 | arginine decarboxylase | - |
| CXG97_RS25110 () | 4830017..4831516 | + | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| CXG97_RS25115 () | 4831659..4832356 | + | 698 | Protein_4613 | IS1 family transposase IS1S | Transposase |
| CXG97_RS25125 () | 4832823..4833374 | - | 552 | WP_001447126.1 | Transcriptional repressor MprA | VF |
| CXG97_RS25130 () | 4833541..4834332 | - | 792 | Protein_4615 | IS3 family transposase | - |
| CXG97_RS25135 () | 4834349..4835046 | - | 698 | Protein_4616 | IS1 family transposase IS1S | Transposase |
| CXG97_RS25145 () | 4835576..4836619 | - | 1044 | WP_000147021.1 | hypothetical protein | - |
| CXG97_RS25150 () | 4836875..4838140 | - | 1266 | WP_001218869.1 | Prophage integrase IntS ; Integrase | Integrase |
| CXG97_RS25160 () | 4838520..4839095 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| CXG97_RS25165 () | 4839132..4840829 | - | 1698 | WP_000068942.1 | protein-disulfide reductase DsbD | - |
| CXG97_RS25170 () | 4840805..4841143 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| CXG97_RS25175 () | 4841259..4842560 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|