MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 86812 bp
Accession: NZ_CP025272 Location: 2277727..2364538 Organism: Xanthomonas vasicola pv. vasculorum strain Xv1601 Replicon: chromosome
Accession: NZ_CP025272 Location: 2277727..2364538 Organism: Xanthomonas vasicola pv. vasculorum strain Xv1601 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXP37_RS10585 () | 2274198..2275424 | - | 1227 | WP_017116210.1 | MFS transporter | - |
| CXP37_RS10595 () | 2275684..2275794 | - | 111 | WP_010372880.1 | cytochrome bd-I oxidase subunit CydX | - |
| CXP37_RS10600 () | 2275879..2277029 | - | 1151 | Protein_1944 | cytochrome d ubiquinol oxidase subunit II | - |
| CXP37_RS10605 () | 2277046..2278676 | - | 1631 | Protein_1945 | cytochrome ubiquinol oxidase subunit I | - |
| CXP37_RS10610 () | 2278852..2280564 | + | 1713 | WP_010372882.1 | thiol reductant ABC exporter subunit CydD | - |
| CXP37_RS10615 () | 2280561..2282246 | + | 1686 | WP_087910874.1 | thiol reductant ABC exporter subunit CydC | - |
| CXP37_RS10625 () | 2282454..2283068 | - | 615 | WP_010372887.1 | cold shock and DUF1294 domain-containing protein | - |
| CXP37_RS10630 () | 2283218..2284420 | - | 1203 | WP_010372890.1 | homoserine O-acetyltransferase | - |
| CXP37_RS10635 () | 2284807..2285820 | - | 1014 | WP_010372891.1 | tetratricopeptide repeat protein | - |
| CXP37_RS10640 () | 2285820..2286254 | - | 435 | WP_010372894.1 | cytochrome c-type biogenesis protein CcmH | - |
| CXP37_RS10645 () | 2286251..2286853 | - | 603 | WP_010372897.1 | DsbE family thiol:disulfide interchange protein | - |
| CXP37_RS10650 () | 2286846..2288783 | - | 1938 | WP_087910875.1 | Cytochrome c-type biogenesis protein CcmF | VF |
| CXP37_RS10655 () | 2288955..2289425 | - | 471 | WP_010372901.1 | Cytochrome c-type biogenesis protein CcmE | VF |
| CXP37_RS10660 () | 2289422..2289592 | - | 171 | WP_010372903.1 | heme exporter protein CcmD | - |
| CXP37_RS10665 () | 2289589..2290341 | - | 753 | WP_010382232.1 | Heme exporter protein C | VF |
| CXP37_RS10670 () | 2290436..2291131 | - | 696 | WP_017122706.1 | Heme exporter protein B | VF |
| CXP37_RS10675 () | 2291128..2291772 | - | 645 | WP_008573812.1 | Cytochrome c biogenesis ATP-binding export protein CcmA | VF |
| CXP37_RS10680 () | 2292000..2293148 | + | 1149 | WP_017122707.1 | pyridoxal phosphate-dependent aminotransferase | - |
| CXP37_RS23345 () | 2293212..2293525 | + | 314 | Protein_1960 | hypothetical protein | - |
| CXP37_RS10690 () | 2293522..2294334 | + | 813 | WP_010372920.1 | amidohydrolase | - |
| CXP37_RS10695 () | 2294414..2295262 | - | 849 | WP_026112469.1 | glutaminyl-peptide cyclotransferase | - |
| CXP37_RS10700 () | 2295348..2295785 | + | 438 | WP_010372925.1 | hypothetical protein | - |
| CXP37_RS10705 () | 2295993..2297648 | - | 1656 | WP_087910876.1 | pseudouridine synthase | - |
| CXP37_RS10710 () | 2297641..2298843 | - | 1203 | WP_047698046.1 | SMC-Scp complex subunit ScpB | - |
| CXP37_RS10715 () | 2298857..2299762 | - | 906 | WP_017122348.1 | segregation/condensation protein A | - |
| CXP37_RS10720 () | 2300130..2300429 | + | 300 | WP_010372935.1 | YciI family protein | - |
| CXP37_RS10725 () | 2300426..2300695 | + | 270 | WP_017122637.1 | BolA family transcriptional regulator | - |
| CXP37_RS10730 () | 2301316..2302338 | + | 1023 | WP_017115157.1 | LacI family transcriptional regulator | - |
| CXP37_RS10735 () | 2302623..2305601 | + | 2979 | WP_010372945.1 | TonB-dependent receptor | - |
| CXP37_RS10740 () | 2305705..2307324 | + | 1620 | WP_033009877.1 | hypothetical protein | - |
| CXP37_RS10745 () | 2307328..2308698 | + | 1371 | WP_026112471.1 | sugar ABC transporter substrate-binding protein | - |
| CXP37_RS10750 () | 2308695..2309579 | + | 885 | WP_011347672.1 | sugar ABC transporter permease | - |
| CXP37_RS10755 () | 2309576..2310412 | + | 837 | WP_010372959.1 | carbohydrate ABC transporter permease | - |
| CXP37_RS10760 () | 2310439..2313573 | + | 3135 | WP_017118673.1 | discoidin domain-containing protein | - |
| CXP37_RS10765 () | 2313636..2314547 | + | 912 | WP_010372966.1 | endonuclease/exonuclease/phosphatase family protein | - |
| CXP37_RS10770 () | 2314647..2315867 | - | 1221 | WP_026112472.1 | TraB/GumN family protein | - |
| CXP37_RS10775 () | 2315879..2316400 | - | 522 | WP_010382179.1 | GNAT family N-acetyltransferase | - |
| CXP37_RS10780 () | 2316405..2317289 | - | 885 | WP_010372975.1 | carbon-nitrogen hydrolase | - |
| CXP37_RS10790 () | 2317574..2318608 | - | 1035 | WP_162287471.1 | agmatine deiminase family protein | - |
| CXP37_RS10800 () | 2318844..2319185 | - | 342 | WP_010372985.1 | hypothetical protein | - |
| CXP37_RS10805 () | 2319427..2319552 | - | 126 | WP_005913193.1 | type B 50S ribosomal protein L36 | - |
| CXP37_RS10810 () | 2319725..2320408 | + | 684 | WP_010373008.1 | (d)CMP kinase | - |
| CXP37_RS10815 () | 2320592..2322277 | + | 1686 | WP_003489652.1 | 30S ribosomal protein S1 | - |
| CXP37_RS10820 () | 2322366..2322677 | + | 312 | WP_010373014.1 | integration host factor subunit beta | - |
| CXP37_RS10825 () | 2322745..2323050 | + | 306 | WP_010382169.1 | LapA family protein | - |
| CXP37_RS10830 () | 2323057..2324235 | + | 1179 | WP_010373020.1 | lipopolysaccharide assembly protein LapB | - |
| CXP37_RS10835 () | 2324235..2325203 | + | 969 | WP_010373023.1 | glycosyltransferase family 4 protein | - |
| CXP37_RS10840 () | 2325217..2327124 | + | 1908 | WP_010373025.1 | UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase | VF |
| CXP37_RS10845 () | 2327124..2328017 | + | 894 | WP_087910879.1 | UTP--glucose-1-phosphate uridylyltransferase | VF |
| CXP37_RS10855 () | 2328769..2329089 | - | 321 | WP_010382162.1 | DUF1244 domain-containing protein | - |
| CXP37_RS10860 () | 2329139..2330032 | + | 894 | WP_010373037.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| CXP37_RS10865 () | 2330239..2331696 | + | 1458 | WP_010373039.1 | IMP dehydrogenase | - |
| CXP37_RS10870 () | 2331818..2333383 | + | 1566 | WP_010373041.1 | glutamine-hydrolyzing GMP synthase | - |
| CXP37_RS10875 () | 2333692..2334900 | + | 1209 | WP_010373043.1 | Prophage integrase IntA ; Integrase | Integrase |
| CXP37_RS10880 () | 2335186..2335416 | + | 231 | WP_010370213.1 | AlpA family phage regulatory protein | - |
| CXP37_RS10885 () | 2335420..2336286 | + | 867 | WP_017123059.1 | helicase RepA family protein | - |
| CXP37_RS10890 () | 2336273..2337172 | + | 900 | WP_010370218.1 | replication protein C | - |
| CXP37_RS10900 () | 2338767..2339087 | - | 321 | WP_010370221.1 | hypothetical protein | - |
| CXP37_RS10905 () | 2339093..2340673 | - | 1581 | WP_010370224.1 | P-type conjugative transfer protein TrbL | - |
| CXP37_RS10910 () | 2340676..2340864 | - | 189 | WP_010370227.1 | hypothetical protein | - |
| CXP37_RS10915 () | 2340867..2341661 | - | 795 | WP_026112613.1 | P-type conjugative transfer protein TrbJ | - |
| CXP37_RS10925 () | 2342153..2342368 | - | 216 | WP_010370235.1 | hypothetical protein | - |
| CXP37_RS10930 () | 2342926..2343288 | + | 363 | WP_087910995.1 | CopG family transcriptional regulator | - |
| CXP37_RS10935 () | 2343390..2344385 | + | 996 | WP_087910994.1 | DUF4935 domain-containing protein | - |
| CXP37_RS10940 () | 2344841..2345287 | + | 447 | WP_017115703.1 | hypothetical protein | - |
| CXP37_RS10945 () | 2345352..2345543 | + | 192 | WP_010373115.1 | hypothetical protein | - |
| CXP37_RS10950 () | 2345799..2346773 | - | 975 | WP_199285780.1 | DUF2326 domain-containing protein | - |
| CXP37_RS10960 () | 2346973..2347227 | + | 255 | WP_010373123.1 | plasmid stabilization protein | Antitoxin Detail |
| CXP37_RS10965 () | 2347228..2347647 | + | 420 | WP_010373126.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CXP37_RS10970 () | 2347817..2348602 | + | 786 | WP_087910997.1 | P-type conjugative transfer protein TrbJ | - |
| CXP37_RS10975 () | 2348618..2348893 | + | 276 | WP_017115702.1 | entry exclusion lipoprotein TrbK | - |
| CXP37_RS10980 () | 2348890..2350524 | + | 1635 | WP_010373135.1 | P-type conjugative transfer protein TrbL | - |
| CXP37_RS10985 () | 2350591..2350818 | + | 228 | WP_010373138.1 | type I toxin-antitoxin system ptaRNA1 family toxin | - |
| CXP37_RS10990 () | 2351058..2351417 | - | 360 | WP_010373141.1 | hypothetical protein | - |
| CXP37_RS10995 () | 2351592..2352173 | + | 582 | WP_017122811.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| CXP37_RS11000 () | 2352378..2355053 | + | 2676 | WP_087910993.1 | histidinol-phosphatase | - |
| CXP37_RS11005 () | 2355035..2356210 | + | 1176 | WP_010373152.1 | putative DNA binding domain-containing protein | - |
| CXP37_RS11010 () | 2356272..2356469 | + | 198 | WP_010373154.1 | hypothetical protein | - |
| CXP37_RS11015 () | 2356717..2359155 | - | 2439 | WP_026112473.1 | DUF2309 domain-containing protein | - |
| CXP37_RS11020 () | 2359179..2360750 | - | 1572 | WP_017113197.1 | oxidoreductase | - |
| CXP37_RS11025 () | 2360860..2361750 | + | 891 | WP_017121893.1 | Transcriptional activator protein NhaR | VF |
| CXP37_RS11030 () | 2361788..2362699 | - | 912 | WP_087910992.1 | HTH-type transcriptional regulator PgrR | VF |
| CXP37_RS11035 () | 2362801..2363118 | + | 318 | WP_010373167.1 | nuclear transport factor 2 family protein | - |
| CXP37_RS11040 () | 2363115..2363897 | + | 783 | WP_017113196.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| CXP37_RS11045 () | 2363917..2365035 | - | 1119 | WP_010373173.1 | YeiH family protein | - |
| CXP37_RS11050 () | 2365150..2366073 | + | 924 | WP_010378912.1 | LysR family transcriptional regulator | - |
| CXP37_RS11055 () | 2366281..2366895 | - | 615 | WP_017118679.1 | hypothetical protein | - |
| CXP37_RS11060 () | 2366938..2368092 | - | 1155 | WP_026112474.1 | Cache 3/Cache 2 fusion domain-containing protein | - |
| CXP37_RS11065 () | 2368446..2369087 | - | 642 | WP_017115699.1 | response regulator transcription factor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|