MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 96768 bp
Accession: NZ_CP025239 Location: 1..96768 Organism: Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1928 Replicon: plasmid pSNE2-1928
Accession: NZ_CP025239 Location: 1..96768 Organism: Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1928 Replicon: plasmid pSNE2-1928
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AW84_RS24310 () | 453..1484 | + | 1032 | WP_000907868.1 | replication initiation protein | - |
| AW84_RS24325 () | 2445..2696 | + | 252 | WP_001132897.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AW84_RS24330 () | 2693..2980 | + | 288 | WP_000221869.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AW84_RS24340 () | 3286..4453 | - | 1168 | Protein_3 | IS91 family transposase | - |
| AW84_RS24345 () | 4457..4726 | - | 270 | WP_001371878.1 | hypothetical protein | - |
| AW84_RS24350 () | 4797..4979 | + | 183 | Protein_5 | helix-turn-helix domain-containing protein | - |
| AW84_RS24355 () | 5672..5914 | + | 243 | WP_071781016.1 | Dabb family protein | - |
| AW84_RS24360 () | 6011..6739 | + | 729 | WP_021555209.1 | hypothetical protein | - |
| AW84_RS24365 () | 6807..7307 | + | 501 | WP_021555210.1 | hypothetical protein | - |
| AW84_RS24370 () | 7350..9983 | + | 2634 | WP_076097716.1 | TcfC E-set like domain-containing protein | - |
| AW84_RS24375 () | 10043..11125 | + | 1083 | WP_076097714.1 | hypothetical protein | - |
| AW84_RS24385 () | 11813..12268 | + | 456 | WP_001209678.1 | hypothetical protein | - |
| AW84_RS24390 () | 12327..12944 | - | 618 | WP_000521604.1 | hypothetical protein | - |
| AW84_RS24395 () | 13139..14695 | - | 1557 | WP_000818359.1 | AAA family ATPase | - |
| AW84_RS24400 () | 14960..15550 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| AW84_RS24405 () | 15550..15807 | - | 258 | WP_000371887.1 | hypothetical protein | - |
| AW84_RS24410 () | 16095..17216 | + | 1122 | WP_001012502.1 | DUF3800 domain-containing protein | - |
| AW84_RS24415 () | 17259..17750 | - | 492 | WP_001090930.1 | hypothetical protein | - |
| AW84_RS24420 () | 18306..18656 | + | 351 | WP_000493380.1 | hypothetical protein | - |
| AW84_RS24425 () | 18715..19536 | + | 822 | WP_001316850.1 | hypothetical protein | - |
| AW84_RS24430 () | 19536..20315 | + | 780 | WP_000147280.1 | site-specific integrase | - |
| AW84_RS24435 () | 20494..21138 | + | 645 | WP_001144036.1 | ParA family protein | - |
| AW84_RS24440 () | 21225..21533 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| AW84_RS24445 () | 21947..22927 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| AW84_RS24450 () | 22920..23336 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| AW84_RS24455 () | 23338..24612 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| AW84_RS24460 () | 24612..25049 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AW84_RS24465 () | 25046..25294 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| AW84_RS24475 () | 25712..26614 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| AW84_RS24480 () | 26611..26922 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| AW84_RS24485 () | 26999..27682 | + | 684 | WP_000086178.1 | DNA methylase | - |
| AW84_RS24490 () | 27683..27904 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| AW84_RS24495 () | 27916..28350 | + | 435 | WP_000274403.1 | DUF1380 family protein | - |
| AW84_RS24500 () | 28401..29171 | + | 771 | WP_001044393.1 | hypothetical protein | - |
| AW84_RS24510 () | 29589..30014 | + | 426 | WP_001198886.1 | antirestriction protein | - |
| AW84_RS24515 () | 30061..30483 | + | 423 | WP_000271729.1 | DUF1380 family protein | - |
| AW84_RS24520 () | 30480..30671 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| AW84_RS24530 () | 31004..31072 | - | 69 | Protein_37 | pilus protein | - |
| AW84_RS24540 () | 31441..31968 | + | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| AW84_RS24545 () | 32026..32259 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| AW84_RS24550 () | 32318..34276 | + | 1959 | WP_001145453.1 | ParB/RepB/Spo0J family partition protein | - |
| AW84_RS24555 () | 34331..34765 | + | 435 | WP_000845899.1 | conjugation system SOS inhibitor PsiB | - |
| AW84_RS24560 () | 34762..35481 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| AW84_RS24565 () | 35478..36074 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| AW84_RS25940 () | 36536..37036 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| AW84_RS24585 () | 37765..38199 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| AW84_RS24590 () | 38293..38559 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| AW84_RS24595 () | 38624..39550 | + | 927 | WP_000038402.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| AW84_RS24600 () | 39573..39770 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| AW84_RS24605 () | 39801..40052 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| AW84_RS26060 () | 40086..40283 | - | 198 | WP_001161115.1 | hypothetical protein | - |
| AW84_RS24620 () | 40632..41480 | + | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| AW84_RS24625 () | 41566..41901 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| AW84_RS24630 () | 42135..42467 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| AW84_RS24635 () | 42478..45177 | + | 2700 | WP_001405892.1 | IncI1-type relaxase NikB | - |
| AW84_RS24640 () | 45214..47505 | - | 2292 | WP_001289282.1 | hypothetical protein | - |
| AW84_RS24645 () | 47498..48568 | - | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| AW84_RS24650 () | 48587..49795 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| AW84_RS24655 () | 50102..51193 | - | 1092 | WP_000426061.1 | hypothetical protein | - |
| AW84_RS24660 () | 51508..51660 | + | 153 | WP_001303307.1 | Hok/Gef family protein | - |
| AW84_RS24665 () | 51732..51983 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| AW84_RS25945 () | 52907..53083 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| AW84_RS24680 () | 53292..53501 | - | 210 | WP_001140545.1 | hemolysin expression modulator Hha | - |
| AW84_RS24685 () | 53599..54213 | - | 615 | WP_000578649.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| AW84_RS24690 () | 54289..56457 | - | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| AW84_RS24695 () | 56554..57138 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| AW84_RS24700 () | 57167..58369 | - | 1203 | WP_001189159.1 | IncI1-type conjugal transfer protein TraW | - |
| AW84_RS24705 () | 58336..58950 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| AW84_RS24710 () | 58950..61994 | - | 3045 | WP_001024752.1 | IncI1-type conjugal transfer protein TraU | - |
| AW84_RS24715 () | 62084..62884 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| AW84_RS24720 () | 62868..63056 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| AW84_RS24725 () | 63120..63524 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| AW84_RS24730 () | 63575..64102 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| AW84_RS24735 () | 64102..64806 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| AW84_RS24740 () | 64806..66095 | - | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| AW84_RS24745 () | 66098..67081 | - | 984 | WP_001191878.1 | IncI1-type conjugal transfer protein TraN | - |
| AW84_RS24750 () | 67092..67784 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| AW84_RS24755 () | 67781..68128 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| AW84_RS24760 () | 68146..71913 | - | 3768 | WP_001141534.1 | DNA primase | - |
| AW84_RS24765 () | 72003..72554 | - | 552 | WP_000014584.1 | phospholipase D family protein | - |
| AW84_RS24770 () | 72569..72859 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| AW84_RS24775 () | 72856..74004 | - | 1149 | WP_076097712.1 | plasmid transfer ATPase TraJ | - |
| AW84_RS24780 () | 74001..74819 | - | 819 | WP_000646097.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| AW84_RS24785 () | 74816..75274 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| AW84_RS24790 () | 75669..76253 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| AW84_RS24795 () | 76313..77515 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| AW84_RS24800 () | 77601..78425 | - | 825 | WP_047642106.1 | hypothetical protein | - |
| AW84_RS24805 () | 78576..79730 | - | 1155 | WP_001139958.1 | integrase | - |
| AW84_RS25950 () | 79729..79902 | + | 174 | WP_165375368.1 | hypothetical protein | - |
| AW84_RS26065 () | 80572..80769 | + | 198 | WP_032159596.1 | hypothetical protein | - |
| AW84_RS24820 () | 80766..82190 | - | 1425 | WP_001389385.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| AW84_RS24825 () | 82190..82846 | - | 657 | WP_001389386.1 | prepilin peptidase | - |
| AW84_RS24830 () | 82831..83391 | - | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| AW84_RS24835 () | 83401..84015 | - | 615 | WP_000959786.1 | pilus assembly protein PilX | - |
| AW84_RS24840 () | 84033..85130 | - | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| AW84_RS24845 () | 85143..86696 | - | 1554 | WP_000362202.1 | Flp pilus assembly complex ATPase component TadA | - |
| AW84_RS24850 () | 86707..87159 | - | 453 | WP_001247334.1 | type IV pilus biogenesis protein PilP | - |
| AW84_RS24855 () | 87146..88441 | - | 1296 | WP_000752772.1 | type 4b pilus protein PilO2 | - |
| AW84_RS24860 () | 88434..90116 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| AW84_RS24865 () | 90130..90567 | - | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| AW84_RS24870 () | 90567..91634 | - | 1068 | WP_001302629.1 | type IV pilus biogenesis lipoprotein PilL | - |
| AW84_RS24880 () | 92258..92554 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| AW84_RS24885 () | 92730..92984 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| AW84_RS24895 () | 93146..93697 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| AW84_RS24900 () | 93870..94553 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| AW84_RS24910 () | 94807..95340 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| AW84_RS24920 () | 95782..96069 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| AW84_RS24925 () | 95987..96250 | - | 264 | WP_023156844.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|