MGE detailed information
MGE type: Genomic_island MGE length: 41800 bp
Accession: NZ_CP025048 Location: 3127653..3169452 Organism: Escherichia coli strain SC516 Replicon: chromosome
Accession: NZ_CP025048 Location: 3127653..3169452 Organism: Escherichia coli strain SC516 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CWI33_RS15765 () | 3124060..3124779 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| CWI33_RS15770 () | 3124776..3126407 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| CWI33_RS15775 () | 3126588..3126818 | + | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| CWI33_RS15780 () | 3126830..3127102 | + | 273 | WP_000405651.1 | N-acetyltransferase | - |
| CWI33_RS15790 () | 3127329..3127625 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| CWI33_RS15795 () | 3127653..3127826 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| CWI33_RS15800 () | 3127945..3129462 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| CWI33_RS15805 () | 3129699..3131156 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| CWI33_RS15810 () | 3131215..3133362 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| CWI33_RS15815 () | 3133442..3134776 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CWI33_RS15825 () | 3135142..3136680 | - | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CWI33_RS15835 () | 3137429..3138271 | - | 843 | WP_001529559.1 | DUF4942 domain-containing protein | - |
| CWI33_RS15840 () | 3138356..3138553 | - | 198 | WP_023563519.1 | DUF957 domain-containing protein | - |
| CWI33_RS15845 () | 3138629..3138778 | - | 150 | Protein_2895 | hypothetical protein | - |
| CWI33_RS15850 () | 3138775..3139152 | - | 378 | WP_057109034.1 | TA system toxin CbtA family protein | Toxin Detail |
| CWI33_RS15855 () | 3139242..3139610 | - | 369 | WP_063112944.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CWI33_RS15860 () | 3139660..3140304 | - | 645 | WP_045146861.1 | hypothetical protein | - |
| CWI33_RS15865 () | 3140323..3140544 | - | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| CWI33_RS15870 () | 3140607..3141083 | - | 477 | WP_001186780.1 | RadC family protein | - |
| CWI33_RS15875 () | 3141099..3141584 | - | 486 | WP_000213716.1 | antirestriction protein | - |
| CWI33_RS15880 () | 3141676..3142493 | - | 818 | Protein_2902 | DUF932 domain-containing protein | - |
| CWI33_RS24770 () | 3142594..3142746 | - | 153 | WP_001696589.1 | DUF905 family protein | - |
| CWI33_RS15885 () | 3142752..3143429 | - | 678 | WP_063073422.1 | hypothetical protein | - |
| CWI33_RS15890 () | 3143577..3144257 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| CWI33_RS15895 () | 3144460..3145344 | - | 885 | WP_000010408.1 | 50S ribosome-binding GTPase | - |
| CWI33_RS15900 () | 3145529..3146659 | + | 1131 | WP_000147749.1 | hypothetical protein | - |
| CWI33_RS15905 () | 3148206..3148937 | + | 732 | WP_100881950.1 | inovirus Gp2 family protein | - |
| CWI33_RS15910 () | 3149264..3150868 | + | 1605 | WP_001083419.1 | DUF3987 domain-containing protein | - |
| CWI33_RS15915 () | 3152408..3152974 | + | 567 | WP_001126818.1 | inovirus-type Gp2 protein | - |
| CWI33_RS15920 () | 3153232..3153792 | + | 561 | WP_032216519.1 | hypothetical protein | - |
| CWI33_RS15925 () | 3153861..3154091 | + | 231 | WP_032216528.1 | AlpA family transcriptional regulator | - |
| CWI33_RS15935 () | 3154359..3154859 | + | 501 | WP_032216520.1 | hypothetical protein | - |
| CWI33_RS15940 () | 3154948..3155571 | + | 624 | WP_032216521.1 | hypothetical protein | - |
| CWI33_RS15945 () | 3155750..3156238 | - | 489 | Protein_2915 | IS3 family transposase ISEc31 | Transposase |
| CWI33_RS15950 () | 3156319..3157827 | - | 1509 | WP_048322219.1 | group II intron reverse transcriptase/maturase | - |
| CWI33_RS15960 () | 3158500..3158841 | - | 342 | Protein_2917 | IS3 family transposase ISEc31 | Transposase |
| CWI33_RS15965 () | 3159208..3159945 | + | 738 | WP_001389182.1 | porin family protein | - |
| CWI33_RS15970 () | 3160365..3160724 | + | 360 | Protein_2919 | WYL domain-containing protein | - |
| CWI33_RS15980 () | 3160873..3161853 | - | 981 | WP_000019446.1 | IS5 family transposase ISKpn26 | Transposase |
| CWI33_RS15985 () | 3161941..3162183 | - | 243 | Protein_2921 | N-acetylneuraminic acid mutarotase | - |
| CWI33_RS15990 () | 3162408..3163511 | - | 1104 | WP_000777276.1 | HNH endonuclease | - |
| CWI33_RS15995 () | 3163515..3164222 | - | 708 | WP_000357807.1 | OmpA family protein | - |
| CWI33_RS16000 () | 3164229..3165881 | - | 1653 | WP_000880884.1 | MotA/TolQ/ExbB proton channel family protein | - |
| CWI33_RS16005 () | 3166093..3169452 | + | 3360 | WP_023281478.1 | STY4851/ECs_5259 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|