MGE detailed information
MGE type: Prophage MGE length: 18559 bp
Accession: NZ_CP025045 Location: 2426885..2445443 Organism: Clostridioides difficile strain W0023a Replicon: chromosome
Accession: NZ_CP025045 Location: 2426885..2445443 Organism: Clostridioides difficile strain W0023a Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CWR56_RS11335 () | 2423406..2424107 | + | 702 | WP_004454563.1 | AzlC family ABC transporter permease | - |
| CWR56_RS11340 () | 2424100..2424423 | + | 324 | WP_004454564.1 | AzlD domain-containing protein | - |
| CWR56_RS11345 () | 2424629..2426689 | - | 2061 | WP_009897457.1 | sensor histidine kinase | - |
| CWR56_RS11355 () | 2426885..2427577 | - | 693 | WP_004454566.1 | Transcriptional regulatory protein WalR | VF |
| CWR56_RS11360 () | 2428189..2428563 | - | 375 | WP_004454568.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| CWR56_RS11365 () | 2428782..2429015 | + | 234 | WP_003423177.1 | hypothetical protein | VF |
| CWR56_RS11370 () | 2428999..2429412 | + | 414 | WP_004454570.1 | hypothetical protein | - |
| CWR56_RS11375 () | 2429431..2429631 | + | 201 | WP_004454572.1 | hypothetical protein | - |
| CWR56_RS11380 () | 2430009..2430326 | + | 318 | WP_004454574.1 | hypothetical protein | - |
| CWR56_RS11385 () | 2430462..2430926 | + | 465 | WP_004454576.1 | hypothetical protein | - |
| CWR56_RS11395 () | 2431255..2431416 | - | 162 | WP_004454578.1 | hypothetical protein | - |
| CWR56_RS19105 () | 2431468..2432281 | - | 814 | Protein_2156 | toxin Bro | - |
| CWR56_RS19110 () | 2432402..2432554 | - | 153 | WP_009897477.1 | hypothetical protein | - |
| CWR56_RS11410 () | 2434091..2435014 | - | 924 | WP_004454587.1 | SHOCT domain-containing protein | - |
| - () | 2435158..2435287 | + | 130 | NuclAT_1 | - | Antitoxin Detail |
| CWR56_RS11415 () | 2435208..2435360 | - | 153 | WP_004454589.1 | hypothetical protein | Toxin Detail |
| CWR56_RS11420 () | 2435634..2435957 | - | 324 | WP_009897482.1 | hypothetical protein | - |
| CWR56_RS11425 () | 2435993..2436247 | - | 255 | WP_004454592.1 | hypothetical protein | - |
| CWR56_RS11435 () | 2436679..2437197 | - | 519 | Protein_2162 | IS200-IS605 family transposase ISEfa4 | Transposase |
| CWR56_RS11440 () | 2437487..2437861 | - | 375 | Protein_2163 | BlaI/MecI/CopY family transcriptional regulator | - |
| CWR56_RS11445 () | 2437966..2438340 | - | 375 | WP_004454597.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| CWR56_RS11450 () | 2439146..2439634 | + | 489 | WP_004454599.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| CWR56_RS19050 () | 2440023..2440193 | + | 171 | WP_004454601.1 | hypothetical protein | - |
| CWR56_RS11460 () | 2440670..2440858 | - | 189 | WP_004454605.1 | IS3 family transposase ISEfa10 | Transposase |
| CWR56_RS11465 () | 2441020..2441370 | + | 351 | WP_004454606.1 | DUF3796 domain-containing protein | - |
| CWR56_RS11470 () | 2441372..2441572 | + | 201 | WP_004454608.1 | hypothetical protein | VF |
| CWR56_RS11475 () | 2441895..2442071 | + | 177 | WP_021369041.1 | hypothetical protein | - |
| CWR56_RS11480 () | 2442296..2442496 | + | 201 | WP_003423148.1 | cold-shock protein | - |
| CWR56_RS11485 () | 2443133..2443945 | + | 813 | WP_004454609.1 | molybdate ABC transporter substrate-binding protein | - |
| CWR56_RS11490 () | 2443955..2444746 | + | 792 | WP_004454610.1 | ABC transporter permease | - |
| CWR56_RS11495 () | 2444748..2445443 | + | 696 | WP_021369049.1 | Sulfate/thiosulfate import ATP-binding protein CysA | VF |
| CWR56_RS11500 () | 2445430..2446161 | + | 732 | WP_004454614.1 | membrane protein | - |
| CWR56_RS11505 () | 2446475..2447275 | + | 801 | WP_004454616.1 | PIG-L family deacetylase | - |
| CWR56_RS11510 () | 2447815..2448531 | + | 717 | WP_004454617.1 | response regulator transcription factor | - |
| CWR56_RS11515 () | 2448500..2450092 | + | 1593 | WP_004454619.1 | sensor histidine kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|