MGE detailed information
MGE type: Prophage MGE length: 49952 bp
Accession: NZ_CP025023 Location: 845938..895889 Organism: Staphylococcus argenteus strain XNO106 Replicon: chromosome
Accession: NZ_CP025023 Location: 845938..895889 Organism: Staphylococcus argenteus strain XNO106 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKO49_RS04070 () | 841822..842583 | + | 762 | WP_000168845.1 | Fe-S cluster assembly ATPase SufC | - |
| CKO49_RS04075 () | 842682..843989 | + | 1308 | WP_031788114.1 | Fe-S cluster assembly protein SufD | - |
| CKO49_RS04080 () | 844082..845332 | + | 1251 | WP_072324168.1 | cysteine desulfurase | - |
| CKO49_RS04085 () | 845322..845786 | + | 465 | WP_001010511.1 | SUF system NifU family Fe-S cluster assembly protein | - |
| CKO49_RS04090 () | 845938..847335 | + | 1398 | WP_001074400.1 | Fe-S cluster assembly protein SufB | - |
| CKO49_RS04095 () | 847403..848452 | - | 1050 | WP_001145725.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| CKO49_RS04100 () | 848564..848764 | + | 201 | WP_000143212.1 | excisionase | - |
| CKO49_RS04105 () | 848701..849606 | - | 906 | WP_000391592.1 | hypothetical protein | - |
| CKO49_RS04110 () | 849642..849827 | - | 186 | WP_070005151.1 | hypothetical protein | - |
| CKO49_RS04115 () | 850023..850724 | - | 702 | WP_076692361.1 | XRE family transcriptional regulator | - |
| CKO49_RS04120 () | 850920..851135 | + | 216 | WP_000957143.1 | hypothetical protein | - |
| CKO49_RS04125 () | 851272..851454 | - | 183 | WP_029549357.1 | hypothetical protein | - |
| CKO49_RS04130 () | 851897..852082 | + | 186 | WP_000933365.1 | helix-turn-helix transcriptional regulator | - |
| CKO49_RS04135 () | 852084..852833 | + | 750 | WP_100848564.1 | phage antirepressor KilAC domain-containing protein | - |
| CKO49_RS04140 () | 852849..853064 | + | 216 | WP_017431792.1 | hypothetical protein | - |
| CKO49_RS04145 () | 853020..853265 | - | 246 | WP_000122246.1 | hypothetical protein | - |
| CKO49_RS04150 () | 853336..853557 | + | 222 | WP_000977378.1 | hypothetical protein | - |
| CKO49_RS04155 () | 853550..853708 | + | 159 | WP_100848565.1 | DUF1270 family protein | - |
| CKO49_RS04160 () | 853803..854063 | + | 261 | WP_094969924.1 | DUF1108 family protein | - |
| CKO49_RS04165 () | 854078..854557 | + | 480 | WP_000002516.1 | siphovirus Gp157 family protein | - |
| CKO49_RS04170 () | 854557..855330 | + | 774 | WP_001288247.1 | AAA family ATPase | - |
| CKO49_RS04175 () | 855360..855878 | + | 519 | WP_088815077.1 | DUF669 domain-containing protein | - |
| CKO49_RS04180 () | 855890..856564 | + | 675 | WP_088815076.1 | hypothetical protein | - |
| CKO49_RS04185 () | 856674..857333 | - | 660 | WP_016028252.1 | hypothetical protein | - |
| CKO49_RS04190 () | 857379..858150 | + | 772 | Protein_791 | conserved phage C-terminal domain-containing protein | - |
| CKO49_RS04195 () | 858160..858934 | + | 775 | Protein_792 | ATP-binding protein | - |
| CKO49_RS04200 () | 858928..859086 | + | 159 | WP_000256594.1 | hypothetical protein | - |
| CKO49_RS04205 () | 859099..859320 | + | 222 | WP_001123695.1 | DUF3269 family protein | - |
| CKO49_RS04210 () | 859330..859735 | + | 406 | Protein_795 | DUF1064 domain-containing protein | - |
| CKO49_RS04215 () | 859740..859928 | + | 189 | WP_088808347.1 | DUF3113 family protein | - |
| CKO49_RS04220 () | 859929..860288 | + | 360 | Protein_797 | hypothetical protein | - |
| CKO49_RS04225 () | 860292..860534 | + | 243 | WP_100848566.1 | phi PVL orf 51-like protein | - |
| CKO49_RS04230 () | 860549..860800 | + | 252 | WP_100848567.1 | DUF1024 family protein | Toxin Detail |
| CKO49_RS13705 () | 860790..860963 | + | 174 | WP_000028424.1 | hypothetical protein | Antitoxin Detail |
| CKO49_RS04235 () | 860964..861244 | + | 281 | Protein_801 | hypothetical protein | - |
| CKO49_RS13710 () | 861245..861406 | + | 162 | WP_000889683.1 | hypothetical protein | - |
| CKO49_RS04240 () | 861421..861948 | + | 528 | WP_072473165.1 | dUTPase | - |
| CKO49_RS04245 () | 861985..862191 | + | 207 | WP_029625633.1 | DUF1381 domain-containing protein | - |
| CKO49_RS04250 () | 862188..862361 | + | 174 | WP_029625632.1 | transcriptional activator RinB | - |
| CKO49_RS04255 () | 862362..862508 | + | 147 | WP_000990005.1 | hypothetical protein | - |
| CKO49_RS04260 () | 862523..862942 | + | 420 | Protein_807 | transcriptional regulator | - |
| CKO49_RS04265 () | 863128..863568 | + | 441 | Protein_808 | terminase small subunit | - |
| CKO49_RS04270 () | 863555..864831 | + | 1277 | Protein_809 | PBSX family phage terminase large subunit | - |
| CKO49_RS04275 () | 864842..866384 | + | 1543 | Protein_810 | phage portal protein | - |
| CKO49_RS04280 () | 866391..867387 | + | 997 | Protein_811 | minor capsid protein | - |
| CKO49_RS04285 () | 867460..867631 | + | 172 | Protein_812 | hypothetical protein | - |
| CKO49_RS04290 () | 867768..868382 | + | 615 | WP_000354305.1 | DUF4355 domain-containing protein | - |
| CKO49_RS04295 () | 868427..869373 | + | 947 | Protein_814 | phage major capsid protein | - |
| CKO49_RS04300 () | 869395..869672 | + | 278 | Protein_815 | hypothetical protein | - |
| CKO49_RS04305 () | 869694..870029 | + | 336 | Protein_816 | phage head-tail connector protein | - |
| CKO49_RS04310 () | 870026..870330 | + | 305 | Protein_817 | hypothetical protein | - |
| CKO49_RS04315 () | 870330..870679 | + | 350 | Protein_818 | HK97 gp10 family phage protein | - |
| CKO49_RS04320 () | 870691..871075 | + | 385 | Protein_819 | hypothetical protein | - |
| CKO49_RS04325 () | 871095..871679 | + | 585 | Protein_820 | phage major tail protein, TP901-1 family | - |
| CKO49_RS04330 () | 871741..872106 | + | 366 | WP_001100162.1 | tail assembly chaperone | - |
| CKO49_RS04335 () | 872136..872480 | + | 345 | WP_000105584.1 | hypothetical protein | - |
| CKO49_RS04340 () | 872497..875961 | + | 3465 | WP_072492531.1 | hypothetical protein | - |
| CKO49_RS04345 () | 875974..876921 | + | 948 | WP_000350680.1 | phage tail family protein | - |
| CKO49_RS04350 () | 876930..878831 | + | 1902 | WP_000156406.1 | phage tail protein | - |
| CKO49_RS04355 () | 878846..880756 | + | 1911 | WP_100848568.1 | hypothetical protein | - |
| CKO49_RS04360 () | 880756..882579 | + | 1824 | WP_048657605.1 | phage baseplate upper protein | - |
| CKO49_RS04365 () | 882579..882956 | + | 378 | WP_000705907.1 | DUF2977 domain-containing protein | - |
| CKO49_RS04370 () | 882960..883133 | + | 174 | WP_015990323.1 | XkdX family protein | - |
| CKO49_RS04375 () | 883174..883473 | + | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| CKO49_RS04380 () | 883610..885508 | + | 1899 | WP_100848569.1 | Bifunctional autolysin | VF |
| CKO49_RS04385 () | 885521..886694 | + | 1174 | Protein_832 | BppU family phage baseplate upper protein | - |
| CKO49_RS04390 () | 886700..887095 | + | 396 | WP_000398862.1 | hypothetical protein | - |
| CKO49_RS04395 () | 887151..887453 | + | 303 | WP_000339141.1 | phage holin | - |
| CKO49_RS04400 () | 887464..888918 | + | 1455 | WP_100848570.1 | N-acetylmuramoyl-L-alanine amidase | - |
| CKO49_RS04405 () | 889876..890433 | + | 558 | WP_000528632.1 | hypothetical protein | - |
| CKO49_RS04410 () | 890904..891043 | + | 140 | Protein_837 | hypothetical protein | - |
| CKO49_RS04415 () | 891049..891363 | - | 315 | WP_000274037.1 | hypothetical protein | - |
| CKO49_RS04420 () | 891691..892731 | + | 1041 | WP_031788116.1 | HlyC/CorC family transporter | - |
| CKO49_RS04425 () | 892745..893812 | + | 1068 | WP_031788117.1 | nitronate monooxygenase family protein | - |
| CKO49_RS04430 () | 894201..895049 | + | 849 | WP_031788118.1 | DUF72 domain-containing protein | - |
| CKO49_RS04435 () | 895062..895889 | + | 828 | WP_000927622.1 | sulfite exporter TauE/SafE family protein | - |
| CKO49_RS04440 () | 895916..897235 | + | 1320 | WP_031788119.1 | bifunctional metallophosphatase/5'-nucleotidase | - |
| CKO49_RS04445 () | 897319..898236 | + | 918 | WP_000201875.1 | lipoyl synthase | - |
| CKO49_RS04450 () | 898366..898749 | + | 384 | WP_000598446.1 | YutD family protein | - |
| CKO49_RS04455 () | 898828..899094 | - | 267 | WP_031788120.1 | DUF3055 domain-containing protein | - |
| CKO49_RS04460 () | 899192..899626 | + | 435 | WP_000273987.1 | DUF86 domain-containing protein | - |
| CKO49_RS04465 () | 899626..900405 | + | 780 | WP_031788121.1 | TIGR01457 family HAD-type hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|