MGE detailed information

MGE type: Conjugative plasmid        MGE length: 167373 bp
Accession: NZ_CP025006        Location: 1..167373         Organism: Klebsiella pneumoniae strain AUSMDU00003562       Replicon: plasmid pAUSMDU3562-1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CWN90_RS27655 () 51..1061 + 1011 WP_004152063.1 RepB family plasmid replication initiator protein -
CWN90_RS27665 () 1778..2518 - 741 WP_001515717.1 tyrosine-type recombinase/integrase -
CWN90_RS27670 () 3662..4609 + 948 WP_004152065.1 sensor domain-containing diguanylate cyclase -
CWN90_RS27675 () 4636..4947 - 312 WP_071527918.1 EAL domain-containing protein -
CWN90_RS27680 () 4967..5935 + 969 WP_011977741.1 IS5 family transposase IS903B Transposase
CWN90_RS27685 () 6608..6865 - 258 WP_004197688.1 hypothetical protein -
CWN90_RS27690 () 7398..8081 + 684 Protein_6 putative cyclic di-GMP phosphodiesterase PdeC VF
CWN90_RS27695 () 8085..8919 + 835 Protein_7 EAL domain-containing protein -
CWN90_RS27700 () 9902..11179 - 1278 WP_004152070.1 DUF2254 domain-containing protein -
CWN90_RS27705 () 11242..13239 - 1998 WP_004178088.1 choline BCCT transporter BetT -
CWN90_RS27710 () 13391..14088 - 698 Protein_10 IS1 family transposase IS1X2 Transposase
CWN90_RS27725 () 15577..16061 + 485 Protein_12 IS1 family transposase IS1X2 Transposase
CWN90_RS27730 () 16077..16619 + 543 Protein_13 ISL3 family transposase ISKpn25 Transposase
CWN90_RS27735 () 16915..17346 - 432 WP_004178091.1 silver-binding protein SilE -
CWN90_RS27740 () 17597..19072 - 1476 WP_003032875.1 copper/silver sensor histidine kinase SilS -
CWN90_RS27745 () 19065..19745 - 681 WP_001572351.1 Transcriptional regulatory protein CusR VF
CWN90_RS27750 () 19935..21320 + 1386 WP_000475512.1 Cation efflux system protein CusC VF
CWN90_RS27755 () 21349..21702 + 354 WP_001246153.1 cation efflux system protein CusF -
CWN90_RS27760 () 21816..23108 + 1293 WP_004152079.1 Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB -
CWN90_RS27765 () 23119..26265 + 3147 WP_004098958.1 Cu(+)/Ag(+) efflux RND transporter permease subunit SilA -
CWN90_RS27770 () 26352..26792 + 441 WP_000758228.1 hypothetical protein -
CWN90_RS27775 () 26919..29366 + 2448 WP_004098955.1 Ag(+)-translocating P-type ATPase SilP -
CWN90_RS27780 () 29407..29604 + 198 WP_000843497.1 DUF2933 domain-containing protein -
CWN90_RS27785 () 29638..30375 - 738 WP_004118669.1 Murein DD-endopeptidase MepM VF
CWN90_RS27790 () 30664..31113 - 450 WP_001023257.1 copper resistance protein -
CWN90_RS27795 () 31347..33164 + 1818 WP_004152083.1 multicopper oxidase PcoA -
CWN90_RS27800 () 33170..34060 + 891 WP_001378118.1 copper resistance outer membrane transporter PcoB -
CWN90_RS27805 () 34100..34480 + 381 WP_000025662.1 copper resistance system metallochaperone PcoC -
CWN90_RS27810 () 34485..35414 + 930 WP_004118344.1 copper resistance inner membrane protein PcoD -
CWN90_RS27815 () 35469..36149 + 681 WP_001188930.1 Transcriptional activator protein CopR VF
CWN90_RS27820 () 36146..37546 + 1401 WP_004152084.1 copper resistance membrane spanning protein PcoS -
CWN90_RS27825 () 37763..38197 + 435 WP_004152085.1 copper resistance system metallochaperone PcoE -
CWN90_RS27830 () 38429..38608 - 180 WP_004152086.1 type II toxin-antitoxin system RelE/ParE family toxin -
CWN90_RS27835 () 38669..40289 - 1621 Protein_34 ISL3 family transposase -
CWN90_RS27840 () 40351..40860 + 510 WP_031944101.1 aquaporin -
CWN90_RS27845 () 40910..41407 - 498 WP_004152091.1 GNAT family N-acetyltransferase -
CWN90_RS27850 () 41739..42065 + 327 WP_004152092.1 metalloregulator ArsR/SmtB family transcription factor -
CWN90_RS27855 () 42062..42775 + 714 WP_004152093.1 arsenical resistance protein ArsH -
CWN90_RS27860 () 42784..43329 + 546 WP_004182005.1 sigma-70 family RNA polymerase sigma factor -
CWN90_RS27865 () 43405..43767 + 363 WP_004152095.1 arsenic metallochaperone ArsD family protein -
CWN90_RS27870 () 43792..45542 + 1751 Protein_41 arsenical pump-driving ATPase -
CWN90_RS27875 () 45664..46200 + 537 WP_004152096.1 GNAT family N-acetyltransferase -
CWN90_RS27880 () 46233..46658 - 426 WP_004152097.1 glutaredoxin-dependent arsenate reductase -
CWN90_RS27885 () 46671..47960 - 1290 WP_004152098.1 arsenite efflux transporter membrane subunit ArsB -
CWN90_RS27890 () 48008..49759 - 1752 WP_004152099.1 Arsenical pump-driving ATPase VF
CWN90_RS27895 () 49777..50139 - 363 WP_004152100.1 arsenite efflux transporter metallochaperone ArsD -
CWN90_RS27900 () 50189..50539 - 351 WP_004152101.1 As(III)-sensing metalloregulatory transcriptional repressor ArsR -
CWN90_RS27905 () 50897..51166 + 270 WP_004152102.1 hypothetical protein -
CWN90_RS27910 () 51154..51729 + 576 WP_004152103.1 hypothetical protein -
CWN90_RS27915 () 51760..52254 + 495 WP_004152104.1 DNA-binding protein -
CWN90_RS27920 () 52298..52666 + 369 WP_004152105.1 hypothetical protein -
CWN90_RS27925 () 52700..52903 + 204 WP_004152106.1 hemolysin expression modulator Hha -
CWN90_RS27930 () 52952..53209 + 258 WP_004152107.1 hypothetical protein -
CWN90_RS27935 () 53285..53539 + 255 WP_004152108.1 hypothetical protein -
CWN90_RS27940 () 53715..53981 + 267 WP_003026799.1 DUF1778 domain-containing protein Antitoxin Detail
CWN90_RS27945 () 53969..54451 + 483 WP_003026803.1 GNAT family N-acetyltransferase Toxin Detail
CWN90_RS27950 () 54663..56009 + 1347 WP_020314316.1 ISNCY family transposase ISLad2 Transposase
CWN90_RS27955 () 56510..57764 - 1255 Protein_58 IS3 family transposase ISKpn38 Transposase
CWN90_RS27960 () 57852..58814 - 963 WP_004152113.1 M48 family metalloprotease -
CWN90_RS27965 () 58801..59550 - 750 WP_009483782.1 phosphate-starvation-inducible PsiE family protein -
CWN90_RS27975 () 59788..59985 - 198 WP_004152115.1 hypothetical protein -
CWN90_RS27980 () 59985..62780 - 2796 WP_004152116.1 ATP-dependent Clp protease ATP-binding subunit ClpC VF
CWN90_RS27985 () 62895..63464 - 570 WP_004152117.1 Spore protein SP21 VF
CWN90_RS27990 () 63499..63780 - 282 WP_004152118.1 helix-turn-helix domain-containing protein -
CWN90_RS29165 () 64024..64287 - 264 WP_004118208.1 hypothetical protein -
CWN90_RS29170 () 64302..64565 + 264 WP_004118209.1 transposase -
CWN90_RS28000 () 64510..64626 + 117 Protein_67 transposase domain-containing protein -
CWN90_RS28005 () 64811..65508 + 698 Protein_68 IS1 family transposase IS1X2 Transposase
CWN90_RS28010 () 65767..66747 + 981 WP_000019473.1 IS5 family transposase ISKpn26 Transposase
CWN90_RS28025 () 67329..67848 - 520 Protein_70 IS5 family transposase ISPst7 Transposase
CWN90_RS28030 () 67956..68825 - 870 WP_004152692.1 HTH-type transcriptional activator CmpR VF
CWN90_RS28035 () 68819..69829 - 1011 WP_004152693.1 phosphonate dehydrogenase PtxD -
CWN90_RS28040 () 69838..70665 - 828 WP_004152694.1 phosphonate ABC transporter, permease protein PhnE -
CWN90_RS28045 () 70674..71537 - 864 WP_004152695.1 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein -
CWN90_RS28050 () 71534..72361 - 828 WP_004153729.1 Glutamine transport ATP-binding protein GlnQ VF
CWN90_RS28055 () 72703..73011 + 309 Protein_76 IS5 family transposase ISThi1 Transposase
CWN90_RS28060 () 73217..73921 - 705 WP_004217321.1 IS6 family transposase IS26 Transposase
CWN90_RS28065 () 73994..74470 + 477 WP_001404364.1 TetR/AcrR family transcriptional regulator -
CWN90_RS28080 () 74963..75727 - 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
CWN90_RS29845 () 75845..75910 - 66 Protein_80 EAL domain-containing protein -
CWN90_RS28090 () 75954..76259 - 306 WP_000130000.1 hypothetical protein Relaxase
CWN90_RS28095 () 76270..77475 - 1206 WP_000184001.1 chromate efflux transporter -
CWN90_RS28100 () 77650..77829 - 180 Protein_83 IS6 family transposase IS15 Transposase
CWN90_RS28105 () 77902..80799 + 2898 WP_004152403.1 Tn3 family transposase TnpA_Tn5403 Transposase
CWN90_RS28110 () 80888..81508 + 621 WP_004152402.1 Tn3 family transposase TnpR_TnEc1 Transposase
CWN90_RS28115 () 81607..82017 + 411 WP_004152401.1 hypothetical protein -
CWN90_RS28120 () 82674..83033 - 360 WP_004152400.1 DUF305 domain-containing protein -
CWN90_RS28125 () 83205..83435 - 231 Protein_88 IS5 family transposase ISAeme7 Transposase
CWN90_RS28130 () 83537..84721 + 1185 WP_004152398.1 ISAs1 family transposase ISKpn31 Transposase
CWN90_RS28135 () 84998..86317 + 1320 WP_004152397.1 IS1182 family transposase ISKpn6 Transposase
CWN90_RS28140 () 86567..87448 - 882 WP_004199234.1 Carbapenem-hydrolyzing beta-lactamase KPC ARG
CWN90_RS28150 () 87736..88515 - 780 WP_004152394.1 IS21 family transposase ISKpn7 Transposase
CWN90_RS28155 () 88512..89537 - 1026 WP_004199214.1 IS21 family transposase ISKpn7 Transposase
CWN90_RS28160 () 89644..92673 - 3030 WP_004152392.1 Tn3 family transposase ISPsy42 Transposase
CWN90_RS28165 () 92783..94498 + 1716 WP_004152391.1 Tn3-like element Tn4401 family resolvase TnpR -
CWN90_RS29850 () 94793..94948 + 156 WP_001404092.1 hypothetical protein -
CWN90_RS28170 () 94997..95989 + 993 WP_001145103.1 hypothetical protein -
CWN90_RS29855 () 96016..96177 + 162 WP_004152390.1 hypothetical protein -
CWN90_RS28175 () 96386..96997 - 612 WP_004152389.1 DUF2913 family protein -
CWN90_RS28180 () 96981..97544 - 564 WP_004152388.1 hypothetical protein -
CWN90_RS28195 () 98763..99620 - 858 WP_004152386.1 incFII family plasmid replication initiator RepA -
CWN90_RS28200 () 99613..99690 - 78 WP_004171450.1 RepA leader peptide Tap -
CWN90_RS28205 () 99922..100191 - 270 WP_013609506.1 replication regulatory protein RepA -
CWN90_RS28210 () 100309..100788 - 480 WP_014343478.1 Phospholipase D VF
CWN90_RS28215 () 100964..101272 - 309 WP_004152383.1 hypothetical protein -
CWN90_RS28220 () 101269..101919 - 651 WP_004152382.1 DUF2726 domain-containing protein -
CWN90_RS28225 () 101975..102619 - 645 WP_004153014.1 hypothetical protein -
CWN90_RS28230 () 102669..103271 - 603 WP_015060010.1 hypothetical protein -
CWN90_RS28235 () 103432..104025 - 594 WP_004152380.1 fertility inhibition protein FinO -
CWN90_RS28240 () 104097..104822 - 726 WP_004152379.1 type-F conjugative transfer system pilin acetylase TraX -
CWN90_RS28245 () 104911..110163 - 5253 Protein_111 Multifunctional conjugation protein TraI Relaxase
CWN90_RS28250 () 110163..112475 - 2313 Protein_112 type IV conjugative transfer system coupling protein TraD -
CWN90_RS29860 () 112604..113293 - 690 WP_004198206.1 hypothetical protein -
CWN90_RS28260 () 113485..114216 - 732 WP_004152622.1 complement resistance protein TraT -
CWN90_RS28265 () 114400..114948 - 549 WP_004152623.1 conjugal transfer entry exclusion protein TraS -
CWN90_RS28270 () 114961..117810 - 2850 WP_004242672.1 conjugal transfer mating pair stabilization protein TraG -
CWN90_RS28275 () 117810..119180 - 1371 WP_004178055.1 conjugal transfer protein TraH -
CWN90_RS28280 () 119167..119595 - 429 WP_004152689.1 hypothetical protein -
CWN90_RS28285 () 119588..120160 - 573 WP_004152688.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
CWN90_RS28290 () 120132..120371 - 240 WP_004152687.1 type-F conjugative transfer system pilin chaperone TraQ -
CWN90_RS28295 () 120382..121134 - 753 WP_004152686.1 type-F conjugative transfer system pilin assembly protein TraF -
CWN90_RS28300 () 121155..121481 - 327 WP_004152685.1 hypothetical protein -
CWN90_RS28310 () 121709..121945 - 237 WP_004152683.1 conjugal transfer protein TrbE -
CWN90_RS28315 () 121977..123932 - 1956 WP_004153093.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
CWN90_RS28320 () 123980..124618 - 639 WP_004152682.1 type-F conjugative transfer system pilin assembly protein TrbC -
CWN90_RS28325 () 124631..125623 - 993 WP_004178057.1 conjugal transfer pilus assembly protein TraU -
CWN90_RS28330 () 125634..126260 - 627 WP_004152590.1 type-F conjugative transfer system protein TraW -
CWN90_RS28335 () 126260..126649 - 390 WP_004152591.1 type-F conjugative transfer system protein TrbI -
CWN90_RS28340 () 126649..129288 - 2640 WP_004152592.1 type IV secretion system protein TraC -
CWN90_RS28345 () 129360..129758 - 399 WP_004153071.1 hypothetical protein -
CWN90_RS28355 () 130054..130458 - 405 WP_004152594.1 hypothetical protein -
CWN90_RS28360 () 130525..130842 - 318 WP_004152595.1 hypothetical protein -
CWN90_RS28365 () 130843..131061 - 219 WP_004171484.1 hypothetical protein -
CWN90_RS28370 () 131085..131375 - 291 WP_004152596.1 hypothetical protein -
CWN90_RS28375 () 131380..131790 - 411 WP_004152597.1 lipase chaperone -
CWN90_RS28380 () 131922..132491 - 570 WP_004152598.1 type IV conjugative transfer system lipoprotein TraV -
CWN90_RS28385 () 132514..133110 - 597 WP_004152599.1 conjugal transfer protein TraP -
CWN90_RS28390 () 133103..134527 - 1425 WP_004152600.1 conjugal transfer protein TraB -
CWN90_RS28395 () 134527..135267 - 741 WP_004152601.1 type-F conjugative transfer system secretin TraK -
CWN90_RS28400 () 135254..135820 - 567 WP_004152602.1 type IV conjugative transfer system protein TraE -
CWN90_RS28405 () 135840..136145 - 306 WP_004178059.1 type IV conjugative transfer system protein TraL -
CWN90_RS28410 () 136159..136527 - 369 WP_004178060.1 type IV conjugative transfer system pilin TraA -
CWN90_RS28415 () 136581..136952 - 372 WP_004208838.1 TraY domain-containing protein -
CWN90_RS28420 () 137036..137722 - 687 WP_011977735.1 transcriptional regulator TraJ family protein -
CWN90_RS28425 () 137945..138337 - 393 WP_004178062.1 relaxosome protein TraM -
CWN90_RS28430 () 138771..139256 + 486 WP_004178063.1 hypothetical protein VF
CWN90_RS28435 () 139289..139618 - 330 WP_011977736.1 hypothetical protein -
CWN90_RS28440 () 139651..140472 - 822 WP_004178064.1 DUF945 domain-containing protein -
CWN90_RS28460 () 141306..141719 - 414 WP_004152722.1 helix-turn-helix domain-containing protein -
CWN90_RS28465 () 141720..141998 - 279 WP_004152721.1 helix-turn-helix domain-containing protein -
CWN90_RS28470 () 141988..142308 - 321 WP_004152720.1 type II toxin-antitoxin system RelE/ParE family toxin -
CWN90_RS28475 () 142389..142613 - 225 WP_004152719.1 hypothetical protein -
CWN90_RS28480 () 142624..142836 - 213 WP_004152718.1 hypothetical protein -
CWN90_RS28485 () 142897..143253 - 357 WP_004152717.1 hypothetical protein -
CWN90_RS28495 () 143889..144239 - 351 WP_004152758.1 hypothetical protein -
CWN90_RS28500 () 144236..144508 - 273 WP_004152759.1 hypothetical protein -
CWN90_RS28505 () 145208..145369 - 162 WP_004118124.1 type I toxin-antitoxin system Hok family toxin -
CWN90_RS28510 () 145441..146520 + 1080 WP_004220208.1 IS481 family transposase ISKpn28 Transposase
CWN90_RS28520 () 146698..147072 - 375 WP_004152638.1 hypothetical protein -
CWN90_RS28525 () 147128..147454 - 327 WP_004199358.1 hypothetical protein -
CWN90_RS28530 () 147451..148179 - 729 WP_004152640.1 plasmid SOS inhibition protein A -
CWN90_RS28535 () 148176..148607 - 432 WP_004152641.1 conjugation system SOS inhibitor PsiB -
CWN90_RS28540 () 148674..150710 - 2037 WP_032422417.1 ParB/RepB/Spo0J family partition protein -
CWN90_RS28545 () 150780..151028 - 249 WP_004152643.1 DUF905 domain-containing protein -
CWN90_RS28550 () 151077..151619 - 543 WP_004152644.1 single-stranded DNA-binding protein -
CWN90_RS28565 () 152395..152958 - 564 WP_004152645.1 methyltransferase -
CWN90_RS28570 () 153006..154361 - 1356 WP_004178068.1 DUF3560 domain-containing protein -
CWN90_RS28575 () 154413..154643 - 231 WP_004198570.1 hypothetical protein -
CWN90_RS28580 () 154735..154962 - 228 WP_004178072.1 hypothetical protein -
CWN90_RS28590 () 155744..156061 - 318 WP_004118473.1 hypothetical protein -
CWN90_RS28595 () 156096..156350 - 255 WP_004152754.1 DNA polymerase III subunit theta -
CWN90_RS28600 () 156587..157012 - 426 WP_004118478.1 antirestriction protein -
CWN90_RS28610 () 157533..157763 - 231 WP_004152753.1 hypothetical protein -
CWN90_RS28615 () 157997..159484 - 1488 WP_004178082.1 group II intron reverse transcriptase/maturase -
CWN90_RS28625 () 159887..160312 + 426 WP_004178083.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
CWN90_RS28630 () 160312..161583 + 1272 WP_004152715.1 Y-family DNA polymerase -
CWN90_RS28635 () 161662..161877 + 216 Protein_177 type II toxin-antitoxin system Phd/YefM family antitoxin -
CWN90_RS28640 () 161900..163098 - 1199 Protein_178 IS200-IS605 family transposase IS609 Transposase
CWN90_RS28655 () 164535..165506 - 972 WP_004152062.1 ParB/RepB/Spo0J family plasmid partition protein -
CWN90_RS28660 () 165506..166672 - 1167 WP_000523813.1 Sporulation initiation inhibitor protein Soj VF

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance