MGE detailed information
MGE type: Prophage MGE length: 19868 bp
Accession: NZ_CP025003 Location: 460787..480654 Organism: Dickeya fangzhongdai strain DSM 101947 Replicon: chromosome
Accession: NZ_CP025003 Location: 460787..480654 Organism: Dickeya fangzhongdai strain DSM 101947 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CVE23_RS02140 () | 456310..457818 | - | 1509 | WP_013316104.1 | leucyl aminopeptidase | - |
| CVE23_RS02145 () | 458102..459220 | + | 1119 | WP_049855261.1 | LPS export ABC transporter permease LptF | - |
| CVE23_RS02150 () | 459222..460292 | + | 1071 | WP_100848766.1 | LPS export ABC transporter permease LptG | - |
| CVE23_RS02160 () | 460787..462037 | + | 1251 | WP_100848767.1 | integrase arm-type DNA-binding domain-containing protein | - |
| CVE23_RS02165 () | 462100..464496 | - | 2397 | WP_100848768.1 | SIR2 family protein | - |
| CVE23_RS02175 () | 465696..466577 | + | 882 | WP_100848770.1 | integrase domain-containing protein | - |
| CVE23_RS02180 () | 466580..466780 | + | 201 | WP_188726100.1 | AlpA family transcriptional regulator | - |
| CVE23_RS02185 () | 466777..467316 | + | 540 | WP_100848772.1 | ash family protein | - |
| CVE23_RS02190 () | 467309..469351 | + | 2043 | WP_100848773.1 | AAA family ATPase | - |
| CVE23_RS02195 () | 469574..469840 | - | 267 | WP_013316114.1 | helix-turn-helix domain-containing protein | - |
| CVE23_RS02200 () | 469946..470158 | + | 213 | Protein_418 | transcriptional regulator | - |
| CVE23_RS02205 () | 470303..470704 | - | 402 | WP_100848774.1 | hypothetical protein | - |
| CVE23_RS02210 () | 470733..471212 | - | 480 | WP_015855199.1 | GNAT family N-acetyltransferase | Toxin Detail |
| CVE23_RS02215 () | 471203..471475 | - | 273 | WP_019843650.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| CVE23_RS02220 () | 471741..472859 | + | 1119 | Protein_422 | IS3 family transposase | - |
| CVE23_RS02225 () | 473122..473844 | - | 723 | WP_100848775.1 | methyltransferase domain-containing protein | - |
| CVE23_RS02230 () | 473852..474109 | - | 258 | WP_049855262.1 | YjhX family toxin | - |
| CVE23_RS02235 () | 474562..474900 | - | 339 | WP_100848776.1 | hypothetical protein | - |
| CVE23_RS22595 () | 475288..475986 | - | 699 | WP_145958393.1 | hypothetical protein | - |
| CVE23_RS02245 () | 476005..476999 | - | 995 | Protein_427 | IS3 family transposase | - |
| CVE23_RS02250 () | 477066..478088 | + | 1023 | WP_100848778.1 | IS110 family transposase | - |
| CVE23_RS02255 () | 478307..478423 | - | 117 | Protein_429 | transposase | - |
| CVE23_RS22600 () | 478649..479254 | - | 606 | WP_145958394.1 | hypothetical protein | - |
| CVE23_RS02265 () | 479535..480338 | + | 804 | WP_100848781.1 | hypothetical protein | - |
| CVE23_RS02270 () | 480701..481546 | + | 846 | WP_100848782.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| CVE23_RS02275 () | 481546..482526 | + | 981 | WP_042858441.1 | substrate-binding domain-containing protein | - |
| CVE23_RS02280 () | 482530..484035 | + | 1506 | WP_100848783.1 | sugar ABC transporter ATP-binding protein | - |
| CVE23_RS02285 () | 484028..485017 | + | 990 | WP_038662887.1 | ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|