MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 18373 bp
Accession: NZ_CP025003 Location: 1091458..1109830 Organism: Dickeya fangzhongdai strain DSM 101947 Replicon: chromosome
Accession: NZ_CP025003 Location: 1091458..1109830 Organism: Dickeya fangzhongdai strain DSM 101947 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CVE23_RS05010 () | 1087083..1087889 | + | 807 | WP_100849029.1 | oxidoreductase | - |
| CVE23_RS05015 () | 1088128..1088495 | + | 368 | Protein_970 | GNAT family N-acetyltransferase | - |
| CVE23_RS05020 () | 1088733..1089875 | + | 1143 | WP_100849030.1 | Fic family protein | - |
| CVE23_RS22855 () | 1089859..1090008 | - | 150 | WP_167389533.1 | hypothetical protein | - |
| CVE23_RS05030 () | 1090194..1090412 | - | 219 | WP_049854444.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| CVE23_RS05035 () | 1090427..1090675 | - | 249 | WP_039691666.1 | helix-turn-helix domain-containing protein | - |
| CVE23_RS05040 () | 1090760..1091014 | - | 255 | WP_100850409.1 | helix-turn-helix domain-containing protein | - |
| CVE23_RS05045 () | 1091120..1091362 | + | 243 | WP_100849031.1 | helix-turn-helix domain-containing protein | - |
| CVE23_RS05050 () | 1091709..1091933 | + | 225 | WP_038903497.1 | DUF1778 domain-containing protein | - |
| CVE23_RS05055 () | 1092051..1093175 | + | 1125 | WP_100849032.1 | site-specific integrase | - |
| CVE23_RS05060 () | 1093428..1095410 | + | 1983 | WP_100849033.1 | site-specific DNA-methyltransferase | - |
| CVE23_RS05065 () | 1095410..1098394 | + | 2985 | WP_100849034.1 | DEAD/DEAH box helicase family protein | - |
| CVE23_RS05070 () | 1098511..1099080 | - | 570 | WP_100849035.1 | recombinase family protein | - |
| CVE23_RS22860 () | 1099046..1099258 | - | 213 | WP_023638430.1 | hypothetical protein | - |
| CVE23_RS05075 () | 1099303..1101957 | + | 2655 | WP_208622090.1 | N-6 DNA methylase | - |
| CVE23_RS05080 () | 1101950..1103959 | + | 2010 | WP_188726081.1 | ATP-dependent helicase | - |
| CVE23_RS05085 () | 1103961..1105220 | + | 1260 | WP_100849038.1 | GIY-YIG nuclease family protein | - |
| CVE23_RS05090 () | 1105347..1105652 | - | 306 | WP_015854715.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CVE23_RS05095 () | 1105655..1105873 | - | 219 | WP_100849039.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CVE23_RS05100 () | 1105932..1106675 | - | 744 | WP_100849040.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| CVE23_RS05110 () | 1107577..1107927 | - | 351 | WP_100849042.1 | hypothetical protein | - |
| CVE23_RS22665 () | 1108050..1108238 | + | 189 | WP_033111580.1 | hypothetical protein | - |
| CVE23_RS05115 () | 1108391..1109653 | - | 1263 | WP_100849043.1 | integrase arm-type DNA-binding domain-containing protein | - |
| CVE23_RS05125 () | 1110556..1112709 | + | 2154 | WP_049854445.1 | ornithine decarboxylase | - |
| CVE23_RS05130 () | 1112783..1114240 | - | 1458 | WP_038918049.1 | L-asparagine permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|