MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP024978 Location: 1840239..1849590 Organism: Escherichia coli strain CV839-15 Replicon: chromosome
Accession: NZ_CP024978 Location: 1840239..1849590 Organism: Escherichia coli strain CV839-15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CV83915_RS12425 () | 1836040..1836378 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| CV83915_RS12430 () | 1836354..1838051 | + | 1698 | WP_000068931.1 | protein-disulfide reductase DsbD | - |
| CV83915_RS12435 () | 1838088..1838663 | + | 576 | WP_063079537.1 | transcriptional regulator | - |
| CV83915_RS12445 () | 1839119..1839816 | + | 698 | Protein_1819 | IS1 family transposase | - |
| CV83915_RS12450 () | 1840239..1841777 | + | 1539 | WP_063104751.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CV83915_RS12460 () | 1842143..1843477 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CV83915_RS12465 () | 1843557..1845704 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| CV83915_RS12470 () | 1845763..1847220 | + | 1458 | WP_063079679.1 | dipeptide/tripeptide permease DtpC | - |
| CV83915_RS12475 () | 1847457..1848974 | + | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| CV83915_RS12480 () | 1849093..1849266 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| CV83915_RS12485 () | 1849294..1849590 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| CV83915_RS12495 () | 1849817..1850089 | - | 273 | WP_063079680.1 | N-acetyltransferase | - |
| CV83915_RS12500 () | 1850101..1850331 | - | 231 | WP_000371698.1 | (4Fe-4S)-binding protein | - |
| CV83915_RS12505 () | 1850512..1852143 | + | 1632 | WP_001216486.1 | sensor histidine kinase | - |
| CV83915_RS12510 () | 1852140..1852859 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |