MGE detailed information
MGE type: Conjugative plasmid MGE length: 81261 bp
Accession: NZ_CP024918 Location: 1..81261 Organism: Klebsiella pneumoniae strain NH54 Replicon: plasmid pKPNH54.2
Accession: NZ_CP024918 Location: 1..81261 Organism: Klebsiella pneumoniae strain NH54 Replicon: plasmid pKPNH54.2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CU643_RS27950 () | 1031..1687 | - | 657 | WP_074182772.1 | hypothetical protein | VF |
| CU643_RS27955 () | 1672..2232 | - | 561 | WP_063124165.1 | hypothetical protein | VF |
| CU643_RS27960 () | 2242..2856 | - | 615 | WP_064148457.1 | hypothetical protein | VF |
| CU643_RS27965 () | 2873..3958 | - | 1086 | WP_063103211.1 | hypothetical protein | VF |
| CU643_RS27970 () | 3971..5524 | - | 1554 | WP_042012074.1 | hypothetical protein | VF |
| CU643_RS27975 () | 5535..5987 | - | 453 | WP_001247337.1 | hypothetical protein | VF |
| CU643_RS27980 () | 5974..7269 | - | 1296 | WP_064148456.1 | type 4b pilus protein PilO2 | - |
| CU643_RS27985 () | 7262..8944 | - | 1683 | WP_094307684.1 | hypothetical protein | VF |
| CU643_RS27990 () | 8958..9395 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| CU643_RS27995 () | 9395..10461 | - | 1067 | Protein_10 | hypothetical protein | VF |
| CU643_RS28010 () | 11082..11378 | - | 297 | WP_094307686.1 | pilJ | - |
| CU643_RS28015 () | 11412..11666 | - | 255 | WP_074182765.1 | PilI type IV pilus biogenesis protein | - |
| CU643_RS28020 () | 11838..12521 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| CU643_RS28025 () | 12774..13307 | - | 534 | WP_001306770.1 | transcription termination factor NusG | - |
| CU643_RS28035 () | 13749..14036 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| CU643_RS28040 () | 13954..14217 | - | 264 | WP_001324596.1 | ash family protein | - |
| CU643_RS28055 () | 15189..16220 | + | 1032 | WP_000907867.1 | replication initiation protein | - |
| CU643_RS29460 () | 16915..17174 | + | 260 | Protein_18 | hypothetical protein | - |
| CU643_RS28080 () | 17281..17544 | + | 264 | WP_001089473.1 | hypothetical protein | - |
| CU643_RS28085 () | 17534..17833 | + | 300 | WP_001528606.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CU643_RS28090 () | 17869..18533 | - | 665 | Protein_21 | hypothetical protein | - |
| CU643_RS28095 () | 19103..19666 | - | 564 | WP_000351266.1 | pentapeptide repeat-containing protein | - |
| CU643_RS28100 () | 19670..20401 | - | 732 | WP_000155032.1 | ATP-binding cassette domain-containing protein | - |
| CU643_RS28105 () | 20398..21123 | - | 726 | WP_000258040.1 | microcin B17 immunity protein McbE | - |
| CU643_RS28110 () | 21133..22323 | - | 1191 | WP_000611492.1 | YcaO-like family protein | - |
| CU643_RS28115 () | 22304..23122 | - | 819 | WP_001528601.1 | SagB/ThcOx family dehydrogenase | - |
| CU643_RS28120 () | 23124..24011 | - | 888 | WP_000243884.1 | McbB family protein | - |
| CU643_RS28125 () | 24038..24244 | - | 207 | WP_021521279.1 | microcin B17 | - |
| CU643_RS28130 () | 24700..24987 | + | 288 | Protein_29 | histidine phosphatase family protein | - |
| CU643_RS28135 () | 25041..25493 | + | 453 | WP_000670963.1 | N-acetyltransferase | - |
| CU643_RS28145 () | 25897..26247 | - | 351 | WP_001365718.1 | plasmid partitioning/stability family protein | - |
| CU643_RS28150 () | 26250..27212 | - | 963 | WP_021545187.1 | plasmid segregation protein ParM | - |
| CU643_RS28155 () | 27359..27652 | + | 294 | WP_032107096.1 | hypothetical protein | - |
| CU643_RS28160 () | 27729..28412 | + | 684 | WP_107342235.1 | DNA methylase | - |
| CU643_RS28165 () | 28413..28634 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| CU643_RS28170 () | 28648..29082 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| CU643_RS29465 () | 29128..29904 | + | 777 | WP_181964545.1 | hypothetical protein | - |
| CU643_RS28185 () | 30319..30744 | + | 426 | WP_001198902.1 | antirestriction protein | - |
| CU643_RS28190 () | 30791..31213 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| CU643_RS28195 () | 31210..31401 | + | 192 | WP_001027497.1 | hypothetical protein | - |
| CU643_RS28215 () | 32170..32697 | + | 528 | WP_001276121.1 | single-stranded DNA-binding protein | - |
| CU643_RS28220 () | 32754..32987 | + | 234 | WP_024261882.1 | DUF905 domain-containing protein | - |
| CU643_RS28225 () | 33049..35007 | + | 1959 | WP_094308811.1 | ParB/RepB/Spo0J family partition protein | - |
| CU643_RS28230 () | 35062..35496 | + | 435 | WP_000845900.1 | conjugation system SOS inhibitor PsiB | - |
| CU643_RS28235 () | 35493..36212 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| CU643_RS28240 () | 36342..37517 | + | 1176 | WP_105910599.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| CU643_RS28250 () | 37965..38465 | + | 501 | WP_107342237.1 | antirestriction protein ArdA | - |
| CU643_RS28265 () | 39193..39627 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| CU643_RS28270 () | 39720..39986 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| CU643_RS28275 () | 40051..40953 | + | 903 | WP_001611382.1 | hypothetical protein | VF |
| CU643_RS28280 () | 41016..41210 | + | 195 | WP_052980062.1 | hypothetical protein | - |
| CU643_RS28285 () | 41241..41492 | - | 252 | WP_000148280.1 | helix-turn-helix domain-containing protein | - |
| CU643_RS29470 () | 41526..41723 | - | 198 | WP_074156128.1 | hypothetical protein | - |
| CU643_RS28300 () | 42072..42920 | + | 849 | WP_107342238.1 | DUF4942 domain-containing protein | - |
| CU643_RS28305 () | 43006..43341 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| CU643_RS28310 () | 43575..43907 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| CU643_RS28315 () | 43918..46617 | + | 2700 | WP_107342239.1 | hypothetical protein | Relaxase |
| CU643_RS28320 () | 46654..48945 | - | 2292 | WP_077265944.1 | conjugal transfer protein TrbC | - |
| CU643_RS28325 () | 48938..50008 | - | 1071 | WP_064148470.1 | IncI1-type conjugal transfer protein TrbB | - |
| CU643_RS28330 () | 50027..51235 | - | 1209 | WP_064148469.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 51415..51475 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 51415..51475 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 51415..51475 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 51415..51475 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| CU643_RS28335 () | 51527..51679 | + | 153 | WP_024179505.1 | Hok/Gef family protein | Toxin Detail |
| CU643_RS28340 () | 51751..52002 | - | 252 | WP_001291962.1 | hypothetical protein | - |
| - () | 52395..52446 | - | 52 | NuclAT_1 | - | - |
| - () | 52395..52446 | - | 52 | NuclAT_1 | - | - |
| - () | 52395..52446 | - | 52 | NuclAT_1 | - | - |
| - () | 52395..52446 | - | 52 | NuclAT_1 | - | - |
| CU643_RS29475 () | 53335..53511 | - | 177 | WP_180335155.1 | hypothetical protein | - |
| CU643_RS28350 () | 53904..54113 | + | 210 | WP_094308840.1 | HEAT repeat domain-containing protein | - |
| CU643_RS28355 () | 54185..54835 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CU643_RS28360 () | 54909..57077 | - | 2169 | WP_107342240.1 | DotA/TraY family protein | - |
| CU643_RS28365 () | 57174..57758 | - | 585 | WP_001476649.1 | IncI1-type conjugal transfer protein TraX | - |
| CU643_RS28370 () | 57787..58989 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| CU643_RS28375 () | 58956..59569 | - | 614 | Protein_69 | IncI1-type conjugal transfer protein TraV | - |
| CU643_RS28385 () | 59569..62613 | - | 3045 | WP_094308834.1 | IncI1-type conjugal transfer protein TraU | - |
| CU643_RS28390 () | 62703..63503 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| CU643_RS28395 () | 63487..63675 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| CU643_RS28400 () | 63739..64142 | - | 404 | Protein_73 | IncI1-type conjugal transfer protein TraR | - |
| CU643_RS28405 () | 64193..64720 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| CU643_RS28410 () | 64720..65424 | - | 705 | WP_042012199.1 | IncI1-type conjugal transfer protein TraP | - |
| CU643_RS28415 () | 65424..66713 | - | 1290 | WP_064148464.1 | conjugal transfer protein TraO | - |
| CU643_RS28420 () | 66716..67699 | - | 984 | WP_107342241.1 | hypothetical protein | VF |
| CU643_RS28425 () | 67710..68402 | - | 693 | WP_064148462.1 | DotI/IcmL family type IV secretion protein | - |
| CU643_RS28430 () | 68399..68746 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| CU643_RS28435 () | 68764..72531 | - | 3768 | WP_107342242.1 | DNA primase | - |
| CU643_RS28440 () | 72620..73171 | - | 552 | WP_107342243.1 | Cardiolipin synthase A | VF |
| CU643_RS28445 () | 73186..73476 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| CU643_RS28450 () | 73473..74621 | - | 1149 | WP_001024972.1 | hypothetical protein | VF |
| CU643_RS28455 () | 74618..75436 | - | 819 | WP_107342244.1 | hypothetical protein | VF |
| CU643_RS28460 () | 75433..75891 | - | 459 | WP_107342245.1 | hypothetical protein | VF |
| CU643_RS28465 () | 76286..76870 | - | 585 | WP_000977525.1 | histidine phosphatase family protein | - |
| CU643_RS28470 () | 76930..78132 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| CU643_RS28475 () | 78218..79042 | - | 825 | WP_107342246.1 | conjugal transfer protein TraE | - |
| CU643_RS28480 () | 79193..80347 | - | 1155 | WP_001139955.1 | integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|