MGE detailed information
MGE type: Conjugative plasmid MGE length: 126018 bp
Accession: NZ_CP024917 Location: 1..126018 Organism: Klebsiella pneumoniae strain NH54 Replicon: plasmid pKPNH54.1
Accession: NZ_CP024917 Location: 1..126018 Organism: Klebsiella pneumoniae strain NH54 Replicon: plasmid pKPNH54.1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CU643_RS27075 () | 714..1619 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| CU643_RS27085 () | 1741..2445 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CU643_RS27090 () | 2769..4346 | + | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| CU643_RS27095 () | 4550..5029 | + | 480 | WP_014343478.1 | Phospholipase D | VF |
| CU643_RS27100 () | 5147..5416 | + | 270 | WP_013609506.1 | replication regulatory protein RepA | - |
| CU643_RS27105 () | 5648..5725 | + | 78 | WP_004171457.1 | RepA leader peptide Tap | - |
| CU643_RS27110 () | 5718..6575 | + | 858 | WP_013023768.1 | incFII family plasmid replication initiator RepA | - |
| CU643_RS27125 () | 7767..8948 | - | 1182 | WP_013023770.1 | DUF4268 domain-containing protein | - |
| CU643_RS27130 () | 9231..9380 | - | 150 | Protein_9 | IS110 family transposase | - |
| CU643_RS27135 () | 9436..9603 | - | 168 | Protein_10 | IS5/IS1182 family transposase | - |
| CU643_RS27145 () | 9739..10008 | + | 270 | Protein_11 | SOS response-associated peptidase family protein | - |
| CU643_RS27150 () | 10187..10510 | + | 324 | WP_017899891.1 | hypothetical protein | - |
| CU643_RS27155 () | 10751..11527 | + | 777 | WP_013609504.1 | DUF2971 domain-containing protein | - |
| CU643_RS27160 () | 11663..11917 | - | 255 | WP_009653916.1 | hypothetical protein | - |
| CU643_RS27165 () | 11993..12250 | - | 258 | WP_017899889.1 | hypothetical protein | - |
| CU643_RS27170 () | 12299..12502 | - | 204 | WP_004098931.1 | hemolysin expression modulator Hha | - |
| CU643_RS27175 () | 12536..12904 | - | 369 | WP_015344965.1 | hypothetical protein | - |
| CU643_RS27180 () | 12948..13442 | - | 495 | WP_013023776.1 | hypothetical protein | - |
| CU643_RS27185 () | 13473..14039 | - | 567 | WP_013023777.1 | hypothetical protein | - |
| CU643_RS27190 () | 14036..14299 | - | 264 | WP_013023778.1 | hypothetical protein | - |
| CU643_RS27195 () | 14574..15074 | + | 501 | WP_013023779.1 | hypothetical protein | - |
| CU643_RS27200 () | 15087..15866 | + | 780 | WP_013023780.1 | hypothetical protein | - |
| CU643_RS27205 () | 16073..17665 | + | 1593 | WP_015344964.1 | hypothetical protein | - |
| CU643_RS27210 () | 17699..18826 | + | 1128 | WP_013023782.1 | DUF4238 domain-containing protein | - |
| CU643_RS27215 () | 18823..19113 | + | 291 | WP_013023783.1 | hypothetical protein | - |
| CU643_RS27235 () | 19931..20149 | + | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CU643_RS27240 () | 20151..20456 | + | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CU643_RS27245 () | 20625..21020 | + | 396 | WP_017899885.1 | hypothetical protein | - |
| CU643_RS27250 () | 21047..21361 | + | 315 | WP_053389906.1 | hypothetical protein | - |
| CU643_RS27255 () | 21372..22388 | + | 1017 | WP_017899884.1 | hypothetical protein | - |
| CU643_RS27260 () | 22586..23380 | + | 795 | WP_004197635.1 | site-specific integrase | - |
| CU643_RS27265 () | 23812..23991 | - | 180 | WP_006788217.1 | hypothetical protein | - |
| CU643_RS27270 () | 24111..24737 | - | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| CU643_RS27275 () | 25402..26277 | - | 876 | WP_004098982.1 | RepB family plasmid replication initiator protein | - |
| CU643_RS27280 () | 26689..27960 | - | 1272 | WP_004197646.1 | Y-family DNA polymerase | - |
| CU643_RS27285 () | 27960..28391 | - | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CU643_RS27295 () | 28798..30285 | + | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| CU643_RS27300 () | 30534..31505 | + | 972 | WP_001568038.1 | hypothetical protein | - |
| CU643_RS27305 () | 31508..32179 | + | 672 | WP_015345000.1 | plasmid partitioning/stability family protein | - |
| CU643_RS27310 () | 32243..32473 | + | 231 | WP_001568040.1 | hypothetical protein | - |
| CU643_RS27315 () | 32910..33611 | + | 702 | WP_001568041.1 | DNA methylase | - |
| CU643_RS27320 () | 33611..33832 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| CU643_RS27325 () | 33842..34261 | + | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| CU643_RS27330 () | 34315..35082 | + | 768 | WP_013214013.1 | hypothetical protein | - |
| CU643_RS29445 () | 35763..36191 | + | 429 | WP_004152356.1 | antirestriction protein | - |
| CU643_RS27340 () | 36234..36740 | + | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| CU643_RS27345 () | 36783..36974 | + | 192 | WP_001568047.1 | hypothetical protein | - |
| CU643_RS27350 () | 37162..37416 | + | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| CU643_RS27355 () | 37451..37771 | + | 321 | WP_001568049.1 | hypothetical protein | - |
| CU643_RS27375 () | 38451..38678 | + | 228 | WP_001568050.1 | hypothetical protein | - |
| CU643_RS27380 () | 38770..39000 | + | 231 | WP_001568051.1 | hypothetical protein | - |
| CU643_RS27385 () | 39052..40407 | + | 1356 | WP_015344996.1 | DUF3560 domain-containing protein | - |
| CU643_RS27390 () | 40455..41018 | + | 564 | WP_004152756.1 | methyltransferase | - |
| CU643_RS27405 () | 41848..42390 | + | 543 | WP_015344994.1 | single-stranded DNA-binding protein | - |
| CU643_RS27410 () | 42439..42687 | + | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| CU643_RS27415 () | 42757..44814 | + | 2058 | WP_065519831.1 | ParB/RepB/Spo0J family partition protein | - |
| CU643_RS27420 () | 44859..45290 | + | 432 | WP_013023806.1 | conjugation system SOS inhibitor PsiB | - |
| CU643_RS27425 () | 45287..46015 | + | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| CU643_RS27430 () | 46012..46338 | + | 327 | WP_013023807.1 | hypothetical protein | - |
| CU643_RS27435 () | 46394..46768 | + | 375 | WP_047665807.1 | hypothetical protein | - |
| CU643_RS27445 () | 46996..47154 | + | 159 | WP_014343509.1 | type I toxin-antitoxin system Hok family toxin | - |
| CU643_RS27450 () | 47847..48119 | + | 273 | WP_014343506.1 | hypothetical protein | - |
| CU643_RS27455 () | 48116..48466 | + | 351 | WP_013023809.1 | hypothetical protein | - |
| CU643_RS27460 () | 48481..48798 | + | 318 | WP_013023810.1 | hypothetical protein | - |
| CU643_RS27470 () | 49640..49996 | + | 357 | WP_013023814.1 | hypothetical protein | - |
| CU643_RS27475 () | 50057..50269 | + | 213 | WP_013023815.1 | hypothetical protein | - |
| CU643_RS27480 () | 50280..50504 | + | 225 | WP_004152719.1 | hypothetical protein | - |
| CU643_RS27485 () | 50585..50905 | + | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CU643_RS27490 () | 50895..51173 | + | 279 | WP_004152721.1 | helix-turn-helix domain-containing protein | - |
| CU643_RS27495 () | 51174..51587 | + | 414 | WP_013023817.1 | helix-turn-helix domain-containing protein | - |
| CU643_RS27500 () | 51723..52931 | - | 1209 | WP_047665806.1 | IS256 family transposase ISEic2 | Transposase |
| CU643_RS27510 () | 53739..54560 | + | 822 | WP_004152492.1 | DUF945 domain-containing protein | - |
| CU643_RS27515 () | 54593..54922 | + | 330 | WP_011977736.1 | hypothetical protein | - |
| CU643_RS27520 () | 54955..55440 | - | 486 | WP_001568108.1 | hypothetical protein | VF |
| CU643_RS27525 () | 55872..56264 | + | 393 | WP_004194114.1 | relaxosome protein TraM | - |
| CU643_RS27530 () | 56494..57195 | + | 702 | WP_004194113.1 | hypothetical protein | - |
| CU643_RS27535 () | 57281..57481 | + | 201 | WP_004194116.1 | TraY domain-containing protein | - |
| CU643_RS27540 () | 57550..57918 | + | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| CU643_RS27545 () | 57932..58237 | + | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| CU643_RS27550 () | 58257..58823 | + | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| CU643_RS27555 () | 58810..59550 | + | 741 | WP_013023821.1 | type-F conjugative transfer system secretin TraK | - |
| CU643_RS27560 () | 59550..60974 | + | 1425 | WP_004194260.1 | conjugal transfer protein TraB | - |
| CU643_RS27565 () | 61088..61672 | + | 585 | WP_013023822.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CU643_RS27570 () | 61804..62214 | + | 411 | WP_009309869.1 | hypothetical protein | - |
| CU643_RS27575 () | 62320..62538 | + | 219 | WP_015344987.1 | hypothetical protein | - |
| CU643_RS27580 () | 62539..62850 | + | 312 | WP_015344986.1 | hypothetical protein | - |
| CU643_RS27585 () | 62917..63321 | + | 405 | WP_004197817.1 | hypothetical protein | - |
| CU643_RS27595 () | 63697..64095 | + | 399 | WP_013609531.1 | hypothetical protein | - |
| CU643_RS27600 () | 64167..66806 | + | 2640 | WP_013023824.1 | type IV secretion system protein TraC | - |
| CU643_RS27605 () | 66806..67195 | + | 390 | WP_004197815.1 | type-F conjugative transfer system protein TrbI | - |
| CU643_RS27610 () | 67195..67821 | + | 627 | WP_009309871.1 | type-F conjugative transfer system protein TraW | - |
| CU643_RS27615 () | 67863..68252 | + | 390 | WP_004194992.1 | hypothetical protein | - |
| CU643_RS27620 () | 68249..69238 | + | 990 | WP_009309872.1 | conjugal transfer pilus assembly protein TraU | - |
| CU643_RS27625 () | 69251..69889 | + | 639 | WP_011977786.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CU643_RS27630 () | 69948..71903 | + | 1956 | WP_013023827.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CU643_RS27635 () | 71935..72189 | + | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| CU643_RS27640 () | 72167..72415 | + | 249 | WP_004152675.1 | hypothetical protein | - |
| CU643_RS27645 () | 72428..72754 | + | 327 | WP_004152676.1 | hypothetical protein | - |
| CU643_RS27650 () | 72775..73527 | + | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CU643_RS27655 () | 73538..73777 | + | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CU643_RS27660 () | 73749..74306 | + | 558 | WP_013214031.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CU643_RS27665 () | 74352..74795 | + | 444 | WP_014343488.1 | F-type conjugal transfer protein TrbF | - |
| CU643_RS27670 () | 74773..76152 | + | 1380 | WP_014343487.1 | conjugal transfer protein TraH | - |
| CU643_RS27675 () | 76152..79001 | + | 2850 | WP_013609534.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CU643_RS27680 () | 79004..79534 | + | 531 | Protein_105 | hypothetical protein | - |
| CU643_RS27685 () | 79722..80453 | + | 732 | WP_013023830.1 | complement resistance protein TraT | - |
| CU643_RS29450 () | 80646..81335 | + | 690 | WP_013023831.1 | hypothetical protein | - |
| CU643_RS27695 () | 81462..83774 | + | 2313 | Protein_108 | type IV conjugative transfer system coupling protein TraD | - |
| CU643_RS27700 () | 83774..89035 | + | 5262 | WP_047665818.1 | Multifunctional conjugation protein TraI | Relaxase |
| CU643_RS27705 () | 89116..89841 | + | 726 | WP_013023834.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| CU643_RS27710 () | 89913..90506 | + | 594 | WP_013609537.1 | fertility inhibition protein FinO | - |
| CU643_RS27715 () | 90667..91269 | + | 603 | WP_013023836.1 | hypothetical protein | - |
| CU643_RS27720 () | 91319..91963 | + | 645 | WP_014343481.1 | hypothetical protein | - |
| CU643_RS27725 () | 92019..92669 | + | 651 | WP_014343480.1 | DUF2726 domain-containing protein | - |
| CU643_RS27730 () | 92666..92974 | + | 309 | WP_004152383.1 | hypothetical protein | - |
| CU643_RS27735 () | 93207..94067 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| CU643_RS27740 () | 94250..94807 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| CU643_RS27745 () | 94971..95165 | + | 195 | Protein_118 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CU643_RS27750 () | 95371..96633 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| CU643_RS27755 () | 96761..97741 | + | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| CU643_RS27765 () | 98089..98964 | + | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| CU643_RS27770 () | 99011..99343 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| CU643_RS27775 () | 99357..102152 | + | 2796 | Protein_123 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CU643_RS27785 () | 102305..104056 | - | 1752 | Protein_124 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CU643_RS27790 () | 104045..104452 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| CU643_RS27795 () | 104590..105474 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| CU643_RS27800 () | 105506..106705 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| CU643_RS27805 () | 106811..107461 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| CU643_RS27810 () | 107493..107735 | - | 243 | WP_000844627.1 | transposase | - |
| CU643_RS27815 () | 107793..108047 | - | 255 | Protein_130 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CU643_RS27820 () | 108112..108816 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CU643_RS27830 () | 109291..110304 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| CU643_RS27835 () | 110596..111150 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| CU643_RS27840 () | 111247..111699 | + | 453 | WP_001749986.1 | hypothetical protein | ARG |
| CU643_RS27845 () | 111832..112305 | + | 474 | WP_001749985.1 | Dihydrofolate reductase type 1 | ARG |
| CU643_RS27850 () | 112486..113331 | + | 846 | WP_001749984.1 | Streptomycin 3''-adenylyltransferase | ARG |
| CU643_RS27855 () | 113448..113795 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| CU643_RS27860 () | 113789..114628 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| CU643_RS27865 () | 115033..116574 | + | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| CU643_RS27870 () | 117039..117947 | + | 909 | WP_001749993.1 | putative oxidoreductase YghA | VF |
| CU643_RS27875 () | 118039..118683 | - | 645 | WP_001749994.1 | Pentapeptide repeat protein | ARG |
| CU643_RS27880 () | 118778..118873 | - | 96 | Protein_142 | hypothetical protein | - |
| CU643_RS27885 () | 118914..119261 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| CU643_RS27890 () | 119255..120094 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| CU643_RS27900 () | 120291..120494 | + | 204 | WP_064765192.1 | hypothetical protein | - |
| CU643_RS27905 () | 120676..121680 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| CU643_RS27910 () | 121908..123113 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| CU643_RS27915 () | 123124..123429 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| CU643_RS29455 () | 123473..123538 | + | 66 | Protein_149 | EAL domain-containing protein | - |
| CU643_RS27925 () | 123656..124420 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| CU643_RS27940 () | 124913..125497 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|