NZ_CP0248921..236354

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 236354 bp
Accession: NZ_CP024892        Location: 1..236354         Organism: Rhodococcus ruber strain YYL       Replicon: plasmid pYYL1.1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CSW53_RS26465 () 829..1473 - 645 WP_102032059.1 IS1380 family transposase IS1676 Transposase
CSW53_RS26475 () 2037..2402 - 366 WP_102032061.1 hypothetical protein -
CSW53_RS26480 () 2539..4120 + 1582 Protein_3 IS21 family transposase -
CSW53_RS26485 () 4117..4452 + 336 Protein_4 IS21 family transposase IS1415 Transposase
CSW53_RS26490 () 4560..5177 + 618 WP_102032043.1 class I SAM-dependent methyltransferase -
CSW53_RS26495 () 5231..5986 - 756 WP_102032058.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
CSW53_RS26500 () 6090..9083 - 2994 WP_102032044.1 Tn3 family transposase TnpA_ISNpu13 Transposase
CSW53_RS26505 () 9177..9497 - 321 Protein_8 Nramp family divalent metal transporter -
CSW53_RS26510 () 9760..11199 - 1440 WP_014203931.1 aldehyde dehydrogenase family protein -
CSW53_RS26515 () 11453..12085 - 633 WP_102032062.1 GPR1/FUN34/YaaH family transporter -
CSW53_RS26520 () 12164..13273 - 1110 WP_102032063.1 IS630 family transposase ISMsm2 Transposase
CSW53_RS26525 () 13522..13875 - 354 WP_190242447.1 MmoB/DmpM family protein -
CSW53_RS26530 () 13875..14915 - 1041 WP_014203928.1 aromatic/alkene monooxygenase hydroxylase subunit beta -
CSW53_RS26535 () 14946..16034 - 1089 WP_102032181.1 2Fe-2S iron-sulfur cluster binding domain-containing protein -
CSW53_RS26540 () 16158..17642 - 1485 WP_190242448.1 methane monooxygenase -
CSW53_RS26545 () 17945..19447 - 1503 WP_102032066.1 aldehyde dehydrogenase family protein -
CSW53_RS26550 () 19600..19923 - 324 WP_165965805.1 EthD family reductase -
CSW53_RS26555 () 20844..21452 + 609 WP_190242449.1 GntR family transcriptional regulator -
CSW53_RS26560 () 21793..23202 - 1410 WP_102032069.1 IS1380 family transposase IS1677 Transposase
CSW53_RS26565 () 23527..24816 + 1290 WP_014203922.1 iron-containing alcohol dehydrogenase -
CSW53_RS26570 () 25020..27947 + 2928 WP_102032070.1 FAD-binding oxidoreductase -
CSW53_RS26575 () 28243..28725 - 483 WP_102032071.1 transposase -
CSW53_RS26580 () 29794..31375 + 1582 Protein_23 IS21 family transposase -
CSW53_RS26585 () 31372..31707 + 336 Protein_24 IS21 family transposase IS1415 Transposase
CSW53_RS26590 () 31815..32432 + 618 WP_102032043.1 class I SAM-dependent methyltransferase -
CSW53_RS26595 () 32486..33241 - 756 WP_102032058.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
CSW53_RS26600 () 33345..36338 - 2994 WP_102032044.1 Tn3 family transposase TnpA_ISNpu13 Transposase
CSW53_RS27700 () 36433..36588 - 156 Protein_28 DUF5593 domain-containing protein -
CSW53_RS26605 () 36679..38037 - 1359 WP_006931038.1 cytochrome P450 -
CSW53_RS26610 () 39063..39779 + 717 WP_029540292.1 ParA family protein -
CSW53_RS26615 () 39772..40290 + 519 WP_006931050.1 hypothetical protein -
CSW53_RS26620 () 40500..41495 + 996 WP_017681395.1 DUF2637 domain-containing protein -
CSW53_RS26625 () 41871..43346 - 1476 WP_017681396.1 putative lipid II flippase FtsW -
CSW53_RS26635 () 43565..43873 - 309 WP_006936885.1 hypothetical protein -
CSW53_RS26640 () 44023..44679 + 657 WP_006936883.1 hypothetical protein -
CSW53_RS26645 () 44766..45929 - 1164 WP_102032047.1 arabinosyltransferase domain-containing protein -
CSW53_RS28160 () 46407..46700 + 294 WP_124259314.1 hypothetical protein -
CSW53_RS26655 () 47010..47192 + 183 WP_006936872.1 hypothetical protein -
CSW53_RS26660 () 47455..48198 - 744 WP_017681401.1 methyltransferase domain-containing protein -
CSW53_RS26665 () 49297..50106 - 810 WP_003939268.1 hypothetical protein VF
CSW53_RS26670 () 50106..51491 - 1386 WP_003939267.1 DDE-type integrase/transposase/recombinase -
CSW53_RS26675 () 51493..52095 - 603 WP_003939266.1 Tn3 family transposase ISPsy42 Transposase
CSW53_RS26680 () 52323..52652 + 330 WP_185113669.1 metalloregulator ArsR/SmtB family transcription factor -
CSW53_RS26685 () 52649..53245 + 597 WP_003939264.1 cadmium resistance transporter -
CSW53_RS26690 () 53443..54030 + 588 WP_102032072.1 Tn3 family transposase TnpR_ISRsp12 Transposase
CSW53_RS26695 () 54129..54977 + 849 Protein_46 hypothetical protein -
CSW53_RS26700 () 55006..56808 - 1803 WP_048774272.1 hypothetical protein -
CSW53_RS27705 () 57112..57318 - 207 WP_124259439.1 toxin-antitoxin system -
CSW53_RS26705 () 57486..57944 - 459 WP_026137923.1 helix-turn-helix domain-containing protein -
CSW53_RS26710 () 58850..60466 + 1617 WP_102032073.1 cutinase family protein -
CSW53_RS26715 () 60551..61630 + 1080 WP_051059604.1 hypothetical protein -
CSW53_RS26720 () 61734..62849 + 1116 WP_102032074.1 hypothetical protein -
CSW53_RS26725 () 62846..63619 + 774 WP_102032075.1 hypothetical protein -
CSW53_RS26730 () 63616..64188 + 573 WP_040273368.1 hypothetical protein -
CSW53_RS26735 () 64206..64499 + 294 WP_102032076.1 hypothetical protein -
CSW53_RS26740 () 64516..64902 + 387 WP_102032077.1 hypothetical protein -
CSW53_RS26745 () 64899..65504 + 606 WP_102032078.1 hypothetical protein -
CSW53_RS26750 () 65501..66343 + 843 WP_029547247.1 hypothetical protein -
CSW53_RS26755 () 66337..67905 + 1569 WP_102032182.1 hypothetical protein -
CSW53_RS26760 () 67902..69407 + 1506 WP_102032079.1 hypothetical protein -
CSW53_RS26765 () 69427..71187 + 1761 WP_102032080.1 ATP-binding protein -
CSW53_RS26770 () 71184..71498 + 315 WP_102032081.1 hypothetical protein -
CSW53_RS26775 () 71495..73132 + 1638 WP_102032082.1 M23 family metallopeptidase -
CSW53_RS26780 () 73147..73695 + 549 WP_102032183.1 hypothetical protein -
CSW53_RS26785 () 73711..75702 + 1992 WP_102032083.1 type IV secretory system conjugative DNA transfer family protein -
CSW53_RS26790 () 75707..76207 + 501 WP_010596717.1 DUF4913 domain-containing protein -
CSW53_RS26795 () 76305..76889 - 585 WP_102032084.1 hypothetical protein -
CSW53_RS26800 () 77070..78500 + 1431 WP_190242452.1 transposase -
CSW53_RS27710 () 78510..78695 - 186 Protein_69 hypothetical protein -
CSW53_RS26805 () 78692..79042 - 351 WP_029547237.1 hypothetical protein -
CSW53_RS26810 () 79376..80494 - 1119 WP_102032086.1 hypothetical protein -
CSW53_RS26815 () 80542..84819 - 4278 WP_102032087.1 Multifunctional conjugation protein TraI Relaxase
CSW53_RS26820 () 85074..85649 + 576 WP_102032088.1 hypothetical protein -
CSW53_RS26825 () 85859..87211 + 1353 WP_102032089.1 VWA domain-containing protein -
CSW53_RS26830 () 87695..88660 - 966 WP_102032090.1 Adenosine monophosphate-protein transferase VbhT VF
CSW53_RS26835 () 88662..88850 - 189 WP_029547296.1 hypothetical protein -
CSW53_RS26840 () 88931..97942 - 9012 WP_102032091.1 DEAD/DEAH box helicase family protein -
CSW53_RS26845 () 98038..98670 - 633 WP_102032092.1 hypothetical protein -
CSW53_RS26855 () 99239..99430 + 192 WP_102032094.1 hypothetical protein -
CSW53_RS26865 () 99587..100286 - 700 Protein_80 IS3 family transposase ISRhosp1 Transposase
CSW53_RS26870 () 100486..102027 + 1542 WP_102031818.1 IS21 family transposase ISMt2 Transposase
CSW53_RS26875 () 102074..102838 + 765 WP_102031817.1 IS21 family transposase ISMt2 Transposase
CSW53_RS26880 () 102939..103449 - 511 Protein_83 IS3 family transposase ISRhosp1 Transposase
CSW53_RS26885 () 103472..104660 - 1189 Protein_84 ISL3 family transposase -
CSW53_RS26890 () 105064..105642 + 579 WP_190242434.1 alpha-ketoglutarate-dependent dioxygenase AlkB -
CSW53_RS26895 () 105671..106156 + 486 WP_102032037.1 hypothetical protein -
CSW53_RS27715 () 106242..107339 + 1098 WP_145961985.1 hypothetical protein -
CSW53_RS26910 () 107285..108223 + 939 WP_102032096.1 class I SAM-dependent methyltransferase -
CSW53_RS27720 () 108220..108678 + 459 WP_145961986.1 hypothetical protein -
CSW53_RS26920 () 108675..109679 + 1005 WP_190242450.1 aldo/keto reductase -
CSW53_RS26925 () 109696..110670 + 975 WP_190242451.1 TauD/TfdA family dioxygenase -
CSW53_RS26930 () 110855..112213 - 1359 Protein_92 ISL3 family transposase ISMsm4 Transposase
CSW53_RS26935 () 112594..113868 + 1275 WP_102032100.1 IS110 family transposase ISArsp3 Transposase
CSW53_RS26940 () 114241..115812 - 1572 WP_029547282.1 IS1634 family transposase ISMsm6 Transposase
CSW53_RS27725 () 115996..116988 - 993 WP_145961987.1 hypothetical protein -
CSW53_RS26945 () 117274..118521 + 1248 WP_102031812.1 IS256 family transposase ISRo1 Transposase
CSW53_RS27730 () 118752..118970 - 219 WP_145961988.1 ISL3 family transposase ISArch5 Transposase
CSW53_RS26950 () 119090..120334 + 1245 WP_102030868.1 IS256 family transposase IS1164 Transposase
CSW53_RS26955 () 120350..120565 - 216 WP_190242437.1 ISL3 family transposase ISAar34 Transposase
CSW53_RS26960 () 120791..121540 - 750 WP_145961989.1 hypothetical protein -
CSW53_RS26965 () 121902..122648 - 747 WP_102032184.1 CHAP domain-containing protein -
CSW53_RS26970 () 122840..124390 - 1551 WP_102032103.1 MBL fold metallo-hydrolase -
CSW53_RS26975 () 124567..125640 + 1074 WP_102032185.1 UDP-N-acetylenolpyruvoylglucosamine reductase VF
CSW53_RS26980 () 125886..126194 - 309 WP_145961990.1 hypothetical protein -
CSW53_RS26985 () 126310..126552 - 243 WP_190242438.1 co-chaperone GroES family protein -
CSW53_RS26990 () 126687..128072 + 1386 WP_102032106.1 hypothetical protein -
CSW53_RS26995 () 128102..129814 + 1713 WP_102032107.1 tetratricopeptide repeat protein -
CSW53_RS27000 () 129833..130855 - 1023 WP_145961991.1 hypothetical protein -
CSW53_RS27005 () 130930..132252 - 1323 WP_190242439.1 CHAT domain-containing protein -
CSW53_RS27010 () 132309..133751 - 1443 WP_102032110.1 hypothetical protein -
CSW53_RS27735 () 133748..135187 - 1440 WP_145961992.1 hypothetical protein -
CSW53_RS27020 () 135316..135852 - 537 WP_102032112.1 NYN domain-containing protein -
CSW53_RS27025 () 136275..136736 - 462 WP_102032113.1 hypothetical protein -
CSW53_RS27030 () 136938..138218 - 1281 WP_102032114.1 hypothetical protein -
CSW53_RS27035 () 138348..138689 - 342 WP_145961993.1 hypothetical protein -
CSW53_RS27040 () 138851..139111 - 261 WP_145961994.1 hypothetical protein -
CSW53_RS27045 () 139230..140021 - 792 WP_102032117.1 hypothetical protein -
CSW53_RS27050 () 140351..140674 - 324 WP_102032118.1 hypothetical protein -
CSW53_RS27055 () 140813..143029 - 2217 WP_102032119.1 ATP-binding protein -
CSW53_RS27740 () 143470..144969 + 1500 WP_145961995.1 hypothetical protein -
CSW53_RS27060 () 145497..146051 - 555 WP_102032120.1 CYTH domain-containing protein -
CSW53_RS27065 () 146459..146572 + 114 Protein_122 IS481 family transposase -
CSW53_RS27070 () 146669..147802 + 1134 WP_102032121.1 IS630 family transposase -
CSW53_RS27075 () 148363..149265 + 903 WP_145961996.1 MFS transporter -
CSW53_RS27080 () 149577..149768 + 192 WP_102032123.1 hypothetical protein -
CSW53_RS27085 () 149805..150429 + 625 Protein_126 Fic family protein -
CSW53_RS27090 () 151117..152688 + 1572 WP_029547282.1 IS1634 family transposase ISMsm6 Transposase
CSW53_RS27095 () 153391..153672 - 282 WP_102032124.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
CSW53_RS27100 () 153669..153944 - 276 WP_017682293.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
CSW53_RS27105 () 154284..154490 - 207 WP_102032125.1 hypothetical protein -
CSW53_RS27110 () 156162..156353 + 192 WP_102032186.1 hypothetical protein -
CSW53_RS27115 () 156435..157994 + 1560 WP_102032126.1 serine hydrolase -
CSW53_RS27120 () 158281..160344 - 2064 WP_102032127.1 Dimodular nonribosomal peptide synthase VF
CSW53_RS27125 () 160600..161304 + 705 WP_190242440.1 A-factor receptor protein VF
CSW53_RS27135 () 162146..162916 - 771 WP_102032129.1 IS21 family transposase IS1415 Transposase
CSW53_RS27140 () 162913..164403 - 1491 WP_190242441.1 IS21 family transposase IS1415 Transposase
CSW53_RS27145 () 165097..165849 + 753 WP_102032131.1 phage Gp37/Gp68 family protein -
CSW53_RS27150 () 165846..167009 - 1164 WP_102032132.1 three-Cys-motif partner protein TcmP -
CSW53_RS27155 () 167030..168202 - 1173 WP_102032133.1 DUF262 domain-containing protein -
CSW53_RS27160 () 168199..169398 - 1200 WP_102032134.1 DNA methyltransferase -
CSW53_RS27165 () 169781..170794 - 1014 WP_102032135.1 hypothetical protein -
CSW53_RS27170 () 170801..171931 - 1131 WP_102032188.1 tyrosine-type recombinase/integrase -
CSW53_RS27180 () 172790..173020 + 231 WP_102032137.1 cold shock domain-containing protein -
CSW53_RS27185 () 173225..174841 - 1617 WP_102032138.1 IS1634 family transposase ISMsm6 Transposase
CSW53_RS27190 () 175160..176482 - 1323 WP_102031149.1 ISL3 family transposase ISMsm4 Transposase
CSW53_RS27745 () 177099..177749 - 651 WP_190242442.1 GNAT family N-acetyltransferase -
CSW53_RS27195 () 178434..178898 - 465 WP_190242443.1 NYN domain-containing protein -
CSW53_RS27200 () 179520..180119 + 600 WP_145961998.1 hypothetical protein -
CSW53_RS27205 () 180073..180465 - 393 WP_102032140.1 hypothetical protein -
CSW53_RS27210 () 180627..181514 + 888 WP_145961999.1 hypothetical protein -
CSW53_RS27215 () 181554..182282 + 729 WP_102032142.1 hypothetical protein -
CSW53_RS27220 () 182376..184130 + 1755 WP_102032143.1 hypothetical protein -
CSW53_RS27225 () 184127..184798 + 672 WP_102032144.1 hypothetical protein -
CSW53_RS27230 () 184802..186535 + 1734 WP_102032145.1 hypothetical protein -
CSW53_RS27235 () 186532..188073 + 1542 WP_102032146.1 hypothetical protein -
CSW53_RS27240 () 188070..188798 + 729 WP_102032147.1 hypothetical protein -
CSW53_RS27245 () 188795..190924 + 2130 WP_102032148.1 hypothetical protein -
CSW53_RS27250 () 190973..191425 - 453 WP_102032149.1 hypothetical protein -
CSW53_RS27255 () 191451..192179 - 729 WP_145962000.1 hypothetical protein -
CSW53_RS27260 () 192243..194333 - 2091 WP_102032151.1 hypothetical protein -
CSW53_RS27265 () 194397..195533 - 1137 WP_102032152.1 hypothetical protein -
CSW53_RS27270 () 195732..197672 - 1941 WP_190242444.1 hypothetical protein -
CSW53_RS27750 () 198735..199055 + 321 WP_145962002.1 hypothetical protein -
CSW53_RS27275 () 199095..200648 + 1554 WP_145962003.1 CRISPR-associated endonuclease Cas1 -
CSW53_RS27280 () 200666..200959 + 294 WP_102032155.1 CRISPR-associated endonuclease Cas2 -
CSW53_RS27755 () 202026..202211 + 186 WP_145962004.1 hypothetical protein -
CSW53_RS27290 () 202208..202474 + 267 WP_102032156.1 hypothetical protein -
CSW53_RS27295 () 202471..202767 + 297 WP_102032157.1 hypothetical protein -
CSW53_RS27305 () 204645..204854 - 210 Protein_170 GIY-YIG nuclease family protein -
CSW53_RS28165 () 204820..205068 + 249 WP_102032158.1 hypothetical protein -
CSW53_RS27315 () 205156..205884 - 729 WP_102032159.1 hypothetical protein -
CSW53_RS27320 () 206407..206652 + 246 WP_102032160.1 hypothetical protein -
CSW53_RS27325 () 206819..207064 - 246 WP_102032161.1 hypothetical protein -
CSW53_RS27330 () 207209..207400 - 192 WP_102032189.1 hypothetical protein -
CSW53_RS27335 () 207800..208660 - 861 WP_102032162.1 hypothetical protein -
CSW53_RS27340 () 209000..209731 - 732 Protein_177 DUF1016 family protein -
CSW53_RS27345 () 209899..210120 - 222 WP_145962005.1 hypothetical protein -
CSW53_RS27350 () 210104..210706 - 603 WP_145962006.1 hypothetical protein -
CSW53_RS27355 () 210778..212613 - 1836 WP_102032165.1 site-specific integrase -
CSW53_RS27360 () 212610..213755 - 1146 WP_102032166.1 tyrosine-type recombinase/integrase -
CSW53_RS27365 () 213862..214170 - 309 Protein_182 DUF1016 domain-containing protein -
CSW53_RS27370 () 214180..214479 - 300 WP_102032167.1 hypothetical protein -
CSW53_RS27375 () 214839..215147 - 309 WP_102032190.1 hypothetical protein -
CSW53_RS27380 () 215302..215823 - 522 WP_102032168.1 hypothetical protein -
CSW53_RS27385 () 216341..217006 + 666 WP_190242445.1 TnsA-like heteromeric transposase endonuclease subunit -
CSW53_RS27390 () 217003..219141 + 2139 WP_102032170.1 DDE-type integrase/transposase/recombinase -
CSW53_RS27395 () 219138..220241 + 1104 WP_102032171.1 ATP-binding protein -
CSW53_RS27400 () 220238..222583 + 2346 WP_102032172.1 TniQ family protein -
CSW53_RS27405 () 222840..223436 - 597 WP_003939264.1 cadmium resistance transporter -
CSW53_RS27410 () 223433..223762 - 330 WP_185113669.1 metalloregulator ArsR/SmtB family transcription factor -
CSW53_RS27415 () 223990..224592 + 603 WP_003939266.1 Tn3 family transposase ISPsy42 Transposase
CSW53_RS27420 () 224594..225979 + 1386 WP_003939267.1 DDE-type integrase/transposase/recombinase -
CSW53_RS27425 () 225979..226788 + 810 WP_003939268.1 hypothetical protein VF
CSW53_RS27760 () 227534..227977 - 444 WP_145962007.1 DEAD/DEAH box helicase -
CSW53_RS27440 () 227998..228303 - 306 WP_102032175.1 hypothetical protein -
CSW53_RS27445 () 228583..228762 - 180 WP_145962008.1 hypothetical protein -
CSW53_RS27450 () 228762..229292 - 531 WP_102032177.1 hypothetical protein -
CSW53_RS27455 () 229289..229531 - 243 WP_102032178.1 hypothetical protein -
CSW53_RS27460 () 229528..229743 - 216 WP_102032179.1 hypothetical protein -
CSW53_RS28170 () 229800..229955 + 156 WP_190242446.1 hypothetical protein -
CSW53_RS27465 () 230089..231231 + 1143 WP_145962009.1 MFS transporter -
CSW53_RS27470 () 231324..231941 + 618 WP_102032043.1 class I SAM-dependent methyltransferase -
CSW53_RS27475 () 231995..232750 - 756 WP_102032058.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
CSW53_RS27480 () 232854..235839 - 2986 Protein_205 Tn3 family transposase -
CSW53_RS27485 () 235932..236249 - 318 Protein_206 Nramp family divalent metal transporter -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance