MGE detailed information
MGE type: Genomic_island MGE length: 13577 bp
Accession: NZ_CP024890 Location: 3795881..3809457 Organism: Rhodococcus ruber strain YYL Replicon: chromosome
Accession: NZ_CP024890 Location: 3795881..3809457 Organism: Rhodococcus ruber strain YYL Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSW53_RS17380 () | 3791712..3792278 | - | 567 | WP_040270376.1 | dihydrofolate reductase family protein | - |
| CSW53_RS17385 () | 3792486..3793109 | - | 624 | WP_040270331.1 | GyrI-like domain-containing protein | - |
| CSW53_RS17395 () | 3793338..3794111 | - | 774 | WP_102031459.1 | ABC transporter permease | - |
| CSW53_RS17400 () | 3794108..3794902 | - | 795 | WP_102031460.1 | ATP-binding cassette domain-containing protein | - |
| CSW53_RS17405 () | 3794899..3795267 | - | 369 | WP_026137944.1 | DUF1048 domain-containing protein | - |
| CSW53_RS17410 () | 3795270..3795599 | - | 330 | WP_040270325.1 | PadR family transcriptional regulator | - |
| CSW53_RS17415 () | 3795881..3797389 | + | 1509 | WP_102031461.1 | hypothetical protein | - |
| CSW53_RS17420 () | 3797425..3797874 | + | 450 | Protein_3462 | transposase | - |
| CSW53_RS17430 () | 3799222..3799881 | + | 660 | Protein_3464 | transposase | - |
| CSW53_RS17435 () | 3800238..3801518 | - | 1281 | WP_048774013.1 | multidrug effflux MFS transporter | - |
| CSW53_RS17440 () | 3801599..3802621 | - | 1023 | WP_102031463.1 | zinc-dependent alcohol dehydrogenase family protein | - |
| CSW53_RS17445 () | 3802764..3803657 | + | 894 | WP_102031464.1 | helix-turn-helix transcriptional regulator | - |
| CSW53_RS17450 () | 3803691..3805433 | - | 1743 | WP_059174979.1 | hypothetical protein | - |
| CSW53_RS17455 () | 3805980..3807038 | - | 1059 | WP_102031466.1 | beta-mannosidase | - |
| CSW53_RS17460 () | 3807115..3807645 | - | 531 | WP_017681490.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| CSW53_RS17470 () | 3807990..3808817 | + | 828 | WP_102031468.1 | hypothetical protein | - |
| CSW53_RS17475 () | 3808892..3809248 | - | 357 | WP_040270293.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| CSW53_RS17480 () | 3809245..3809457 | - | 213 | WP_040270291.1 | ribbon-helix-helix protein, CopG family | Antitoxin Detail |
| CSW53_RS17485 () | 3809667..3810248 | + | 582 | WP_102031469.1 | GNAT family N-acetyltransferase | - |
| CSW53_RS17490 () | 3810256..3811287 | - | 1032 | WP_102031470.1 | hypothetical protein | - |
| CSW53_RS17495 () | 3811401..3812375 | - | 975 | WP_102031471.1 | helix-turn-helix domain-containing protein | - |
| CSW53_RS17500 () | 3812513..3813151 | + | 639 | WP_048774002.1 | isochorismatase family protein | - |
| CSW53_RS17505 () | 3813288..3814199 | + | 912 | WP_017679961.1 | SUMF1/EgtB/PvdO family nonheme iron enzyme | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|