MGE detailed information
MGE type: Genomic_island MGE length: 22042 bp
Accession: NZ_CP024886 Location: 4600276..4622317 Organism: Escherichia coli strain AR_0017 Replicon: chromosome
Accession: NZ_CP024886 Location: 4600276..4622317 Organism: Escherichia coli strain AR_0017 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM344_RS23995 () | 4596395..4596820 | - | 426 | WP_000946069.1 | type VI secretion system baseplate subunit TssE | - |
| AM344_RS24000 () | 4596825..4598309 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| AM344_RS24005 () | 4598332..4598835 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| AM344_RS24010 () | 4599537..4600055 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| AM344_RS24015 () | 4600276..4602258 | + | 1983 | WP_100273056.1 | Actin cross-linking toxin VgrG1 | VF |
| AM344_RS24020 () | 4602365..4603411 | + | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| AM344_RS24030 () | 4603683..4604845 | + | 1163 | WP_097730840.1 | IS3 family transposase ISEc17 | Transposase |
| AM344_RS24035 () | 4605040..4606104 | + | 1065 | Protein_4402 | peptidase C39 | - |
| AM344_RS24040 () | 4606079..4606369 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| AM344_RS24045 () | 4606627..4607391 | + | 765 | Protein_4404 | ISAs1 family transposase ISEc1 | Transposase |
| AM344_RS24050 () | 4607620..4608123 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| AM344_RS24055 () | 4608217..4608705 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| AM344_RS24060 () | 4608731..4608925 | + | 195 | Protein_4407 | ISAs1 family transposase | - |
| AM344_RS24065 () | 4608977..4609747 | - | 771 | WP_021523754.1 | 2-oxoglutaramate amidase | - |
| AM344_RS24070 () | 4609928..4610374 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| AM344_RS24075 () | 4610417..4612861 | - | 2445 | WP_021523755.1 | Acyl-coenzyme A dehydrogenase | VF |
| AM344_RS24080 () | 4613101..4613679 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| AM344_RS24085 () | 4613884..4614651 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| AM344_RS24090 () | 4614622..4615362 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| AM344_RS24095 () | 4615674..4616423 | + | 750 | WP_000093934.1 | Murein DD-endopeptidase MepH | VF |
| AM344_RS24100 () | 4616599..4617096 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| AM344_RS27290 () | 4617091..4617486 | - | 396 | WP_113993547.1 | hypothetical protein | - |
| AM344_RS24105 () | 4617514..4619226 | - | 1713 | Protein_4417 | Flagellar biosynthesis protein FlhA | VF |
| AM344_RS24110 () | 4619198..4619983 | + | 786 | WP_061301231.1 | Chemotaxis protein LafU | VF |
| AM344_RS24115 () | 4620054..4621109 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| AM344_RS24120 () | 4621161..4621454 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| AM344_RS24125 () | 4621457..4621855 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| AM344_RS24130 () | 4621865..4622317 | + | 453 | WP_071778924.1 | GNAT family N-acetyltransferase | - |
| AM344_RS24135 () | 4622507..4623646 | + | 1140 | WP_000521561.1 | RNA ligase RtcB family protein | - |
| AM344_RS24140 () | 4623643..4624257 | + | 615 | WP_000602123.1 | peptide chain release factor H | - |
| AM344_RS24145 () | 4624314..4625771 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| AM344_RS24150 () | 4626032..4626490 | + | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| - () | 4627086..4627166 | + | 81 | NuclAT_4 | - | - |
| - () | 4627086..4627166 | + | 81 | NuclAT_4 | - | - |
| - () | 4627086..4627166 | + | 81 | NuclAT_4 | - | - |
| - () | 4627086..4627166 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|