MGE detailed information
MGE type: Genomic_island MGE length: 24980 bp
Accession: NZ_CP024886 Location: 3888352..3913331 Organism: Escherichia coli strain AR_0017 Replicon: chromosome
Accession: NZ_CP024886 Location: 3888352..3913331 Organism: Escherichia coli strain AR_0017 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM344_RS20145 () | 3884758..3885477 | - | 720 | WP_000611282.1 | two-component system response regulator DcuR | - |
| AM344_RS20150 () | 3885474..3887105 | - | 1632 | WP_001216466.1 | sensor histidine kinase | - |
| AM344_RS20155 () | 3887286..3887516 | + | 231 | WP_100273034.1 | (4Fe-4S)-binding protein | - |
| AM344_RS20160 () | 3887528..3887800 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| AM344_RS20165 () | 3888028..3888324 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| AM344_RS20170 () | 3888352..3888525 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| AM344_RS20175 () | 3888644..3890161 | - | 1518 | WP_100273035.1 | lysine--tRNA ligase | - |
| AM344_RS20180 () | 3890398..3891855 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| AM344_RS20185 () | 3891914..3894061 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| AM344_RS20190 () | 3894141..3895475 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| AM344_RS20200 () | 3895841..3897379 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| AM344_RS20210 () | 3898116..3898970 | - | 855 | WP_001588930.1 | DUF4942 domain-containing protein | - |
| AM344_RS20215 () | 3899055..3899252 | - | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| AM344_RS20220 () | 3899264..3899752 | - | 489 | WP_000761667.1 | hypothetical protein | - |
| AM344_RS20225 () | 3899749..3900126 | - | 378 | WP_000854747.1 | TA system toxin CbtA family protein | Toxin Detail |
| AM344_RS20230 () | 3900216..3900584 | - | 369 | WP_021538665.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| AM344_RS20235 () | 3900659..3900880 | - | 222 | WP_001825901.1 | DUF987 domain-containing protein | - |
| AM344_RS20240 () | 3900943..3901419 | - | 477 | WP_001186747.1 | RadC family protein | - |
| AM344_RS20245 () | 3901435..3901920 | - | 486 | WP_021538211.1 | antirestriction protein | - |
| AM344_RS20250 () | 3902012..3902830 | - | 819 | WP_001234693.1 | DUF945 domain-containing protein | - |
| AM344_RS20260 () | 3902931..3903164 | - | 234 | WP_021538212.1 | DUF905 family protein | - |
| AM344_RS20265 () | 3903170..3903847 | - | 678 | WP_001097364.1 | hypothetical protein | - |
| AM344_RS20270 () | 3903966..3904850 | - | 885 | WP_000010387.1 | 50S ribosome-binding GTPase | - |
| AM344_RS20275 () | 3904957..3905889 | + | 933 | WP_021538213.1 | hypothetical protein | - |
| AM344_RS20280 () | 3905886..3906695 | - | 810 | WP_000816117.1 | hypothetical protein | - |
| AM344_RS20285 () | 3908028..3908558 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| AM344_RS20295 () | 3909228..3909959 | + | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| AM344_RS20305 () | 3910480..3910932 | + | 453 | WP_000558152.1 | N-acetyltransferase | - |
| AM344_RS20310 () | 3911468..3912403 | + | 936 | WP_000332862.1 | pseudouridine kinase | - |
| AM344_RS20315 () | 3912396..3913331 | + | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| AM344_RS20320 () | 3913415..3914665 | + | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| AM344_RS20325 () | 3914684..3915778 | - | 1095 | WP_000370278.1 | sugar kinase | - |
| AM344_RS20330 () | 3917097..3917663 | + | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|