MGE detailed information
MGE type: Prophage MGE length: 58570 bp
Accession: NZ_CP024886 Location: 1330744..1389313 Organism: Escherichia coli strain AR_0017 Replicon: chromosome
Accession: NZ_CP024886 Location: 1330744..1389313 Organism: Escherichia coli strain AR_0017 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM344_RS07285 () | 1326571..1327152 | + | 582 | WP_021524268.1 | replication/maintenance protein RepL | - |
| AM344_RS07290 () | 1327237..1327968 | - | 732 | WP_021524269.1 | hypothetical protein | - |
| AM344_RS07295 () | 1328142..1328621 | + | 480 | WP_001233369.1 | DUF4756 family protein | - |
| AM344_RS07300 () | 1328780..1329184 | + | 405 | WP_001287374.1 | H-NS histone family protein | - |
| AM344_RS07305 () | 1329248..1329598 | - | 351 | WP_021524270.1 | hypothetical protein | - |
| AM344_RS07310 () | 1329707..1329949 | - | 243 | WP_000564593.1 | hypothetical protein | - |
| AM344_RS07315 () | 1330023..1330319 | - | 297 | WP_001091322.1 | hypothetical protein | - |
| AM344_RS07320 () | 1330372..1330662 | - | 291 | WP_021524271.1 | hypothetical protein | - |
| AM344_RS07325 () | 1330744..1330962 | - | 219 | WP_001607582.1 | AlpA family transcriptional regulator | - |
| AM344_RS07330 () | 1331178..1332014 | - | 837 | WP_021524272.1 | hypothetical protein | - |
| AM344_RS07335 () | 1332704..1332991 | - | 288 | WP_016240857.1 | hypothetical protein | - |
| AM344_RS07340 () | 1333001..1333279 | - | 279 | WP_001204583.1 | hypothetical protein | - |
| AM344_RS07345 () | 1333276..1335342 | - | 2067 | WP_100272961.1 | prophage tail fiber N-terminal domain-containing protein | - |
| AM344_RS07350 () | 1335407..1336006 | - | 600 | WP_001513563.1 | Outer membrane protein X | VF |
| AM344_RS07355 () | 1336074..1339766 | - | 3693 | WP_100272962.1 | DUF1983 domain-containing protein | - |
| AM344_RS07365 () | 1340110..1340742 | - | 633 | WP_071781460.1 | tail assembly protein | - |
| AM344_RS07370 () | 1340688..1341431 | - | 744 | WP_001528990.1 | C40 family peptidase | - |
| AM344_RS07375 () | 1341442..1342140 | - | 699 | WP_021524657.1 | phage minor tail protein L | - |
| AM344_RS07380 () | 1342140..1342469 | - | 330 | WP_000847298.1 | phage tail protein | - |
| AM344_RS07385 () | 1342466..1345039 | - | 2574 | WP_021538028.1 | phage tail tape measure protein | - |
| AM344_RS07390 () | 1345020..1345433 | - | 414 | WP_000533402.1 | phage tail assembly protein T | - |
| AM344_RS07395 () | 1345460..1345891 | - | 432 | WP_001299690.1 | phage minor tail protein G | - |
| AM344_RS07400 () | 1345910..1346656 | - | 747 | WP_100272963.1 | phage tail protein | - |
| AM344_RS07405 () | 1346664..1347059 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| AM344_RS07410 () | 1347056..1347631 | - | 576 | WP_000974994.1 | phage tail protein | - |
| AM344_RS07415 () | 1347647..1348000 | - | 354 | WP_001204533.1 | tail attachment protein | - |
| AM344_RS07420 () | 1347993..1348376 | - | 384 | WP_001565314.1 | hypothetical protein | - |
| AM344_RS07425 () | 1348428..1349456 | - | 1029 | WP_000522592.1 | major capsid protein | - |
| AM344_RS07430 () | 1349514..1349861 | - | 348 | WP_000256835.1 | head decoration protein | - |
| AM344_RS07435 () | 1349898..1351403 | - | 1506 | WP_016238736.1 | S49 family peptidase | - |
| AM344_RS07440 () | 1351393..1352985 | - | 1593 | WP_021524278.1 | phage portal protein | - |
| AM344_RS07445 () | 1352982..1353188 | - | 207 | WP_000259002.1 | head-tail joining protein | - |
| AM344_RS07450 () | 1353172..1355100 | - | 1929 | WP_016247622.1 | phage terminase large subunit family protein | - |
| AM344_RS07455 () | 1355072..1355581 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| AM344_RS27125 () | 1356196..1356333 | - | 138 | WP_000881609.1 | hypothetical protein | - |
| AM344_RS07475 () | 1356540..1356866 | - | 327 | WP_000830178.1 | TonB family protein | - |
| AM344_RS07480 () | 1357177..1357644 | - | 468 | WP_032142285.1 | lysis protein | - |
| AM344_RS27130 () | 1357647..1357778 | - | 132 | WP_001280932.1 | hypothetical protein | - |
| AM344_RS07485 () | 1357793..1357975 | - | 183 | WP_001151823.1 | hypothetical protein | - |
| AM344_RS07490 () | 1358132..1358665 | - | 534 | WP_001571194.1 | lysozyme | - |
| AM344_RS07495 () | 1358716..1359060 | - | 345 | WP_021538035.1 | YdfR family protein | - |
| AM344_RS07500 () | 1359065..1359280 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| AM344_RS07505 () | 1359357..1359602 | - | 246 | WP_001538590.1 | DUF826 domain-containing protein | - |
| AM344_RS07510 () | 1359640..1359822 | - | 183 | WP_023143432.1 | DUF1378 family protein | - |
| AM344_RS07515 () | 1359959..1361920 | - | 1962 | WP_001538589.1 | SASA family carbohydrate esterase | - |
| AM344_RS07535 () | 1362690..1363403 | - | 714 | WP_100272964.1 | helix-turn-helix domain-containing protein | - |
| AM344_RS07540 () | 1363540..1363737 | - | 198 | WP_021538037.1 | hypothetical protein | - |
| AM344_RS07545 () | 1363964..1364785 | - | 822 | WP_021538038.1 | antitermination protein | - |
| AM344_RS07550 () | 1364782..1365156 | - | 375 | WP_021538039.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AM344_RS07555 () | 1365169..1366218 | - | 1050 | WP_021538040.1 | DUF968 domain-containing protein | - |
| AM344_RS07560 () | 1366220..1366498 | - | 279 | WP_024193993.1 | hypothetical protein | - |
| AM344_RS07565 () | 1366666..1366821 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| AM344_RS07570 () | 1367364..1367597 | - | 234 | WP_000350274.1 | hypothetical protein | - |
| AM344_RS07575 () | 1367705..1367890 | - | 186 | WP_021538041.1 | hypothetical protein | - |
| AM344_RS27140 () | 1368224..1368402 | - | 179 | Protein_1398 | hypothetical protein | - |
| AM344_RS07585 () | 1368404..1368763 | - | 360 | WP_021538042.1 | hypothetical protein | - |
| AM344_RS27370 () | 1368760..1368936 | - | 177 | WP_000753053.1 | hypothetical protein | - |
| AM344_RS07590 () | 1368929..1369111 | - | 183 | WP_001224662.1 | hypothetical protein | - |
| AM344_RS07595 () | 1369205..1369561 | - | 357 | WP_021538043.1 | hypothetical protein | - |
| AM344_RS07600 () | 1369539..1370000 | - | 462 | WP_001209475.1 | ead/Ea22-like family protein | - |
| AM344_RS07605 () | 1369997..1370293 | - | 297 | WP_024188212.1 | DUF4406 domain-containing protein | - |
| AM344_RS07610 () | 1370290..1370571 | - | 282 | WP_072146789.1 | DNA-binding protein | - |
| AM344_RS07615 () | 1370604..1371320 | - | 717 | WP_100272965.1 | DUF1627 domain-containing protein | - |
| AM344_RS27145 () | 1371354..1371896 | - | 543 | WP_160799770.1 | replication protein | - |
| AM344_RS27150 () | 1371808..1372845 | - | 1038 | WP_021538047.1 | hypothetical protein | - |
| AM344_RS07630 () | 1372917..1373342 | - | 426 | WP_000693918.1 | Rha family transcriptional regulator | - |
| AM344_RS07635 () | 1373326..1373598 | - | 273 | WP_000887447.1 | helix-turn-helix domain-containing protein | - |
| AM344_RS07640 () | 1373708..1374109 | + | 402 | WP_001329851.1 | helix-turn-helix domain-containing protein | - |
| AM344_RS07645 () | 1374137..1374328 | + | 192 | WP_000100899.1 | hypothetical protein | Antitoxin Detail |
| AM344_RS07650 () | 1374328..1374615 | + | 288 | WP_000936799.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AM344_RS07660 () | 1374889..1375041 | + | 153 | WP_021538048.1 | DUF1391 family protein | - |
| AM344_RS07665 () | 1375053..1375391 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| AM344_RS07670 () | 1375380..1375646 | - | 267 | WP_012601410.1 | hypothetical protein | - |
| AM344_RS07680 () | 1376150..1376338 | + | 189 | WP_000449172.1 | cell division inhibitor | - |
| AM344_RS07685 () | 1376335..1376523 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| AM344_RS07690 () | 1376619..1379093 | + | 2475 | WP_021538049.1 | exonuclease | - |
| AM344_RS07695 () | 1379152..1379355 | + | 204 | WP_000096346.1 | DUF4224 domain-containing protein | - |
| AM344_RS07700 () | 1379355..1380380 | + | 1026 | WP_001520784.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| AM344_RS07710 () | 1380616..1381413 | + | 798 | WP_021524282.1 | DgsA anti-repressor MtfA | - |
| AM344_RS07720 () | 1381751..1383013 | + | 1263 | WP_000060158.1 | Prophage integrase IntA ; Integrase | Integrase |
| AM344_RS07725 () | 1383207..1384511 | - | 1305 | WP_000703042.1 | Salicylate synthase | VF |
| AM344_RS07730 () | 1384539..1385819 | - | 1281 | WP_001286281.1 | Protein AmpG | VF |
| AM344_RS07735 () | 1385812..1387614 | - | 1803 | WP_001304269.1 | Putative multidrug export ATP-binding/permease protein | VF |
| AM344_RS07740 () | 1387601..1389313 | - | 1713 | WP_001327262.1 | Iron import ATP-binding/permease protein IrtA | VF |
| AM344_RS07745 () | 1389570..1390529 | + | 960 | WP_000140400.1 | yersiniabactin transcriptional regulator YbtA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|