MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 115736 bp
Accession: NZ_CP024882 Location: 1..115736 Organism: Citrobacter freundii strain AR_0022 Replicon: plasmid unitig_1_pilon
Accession: NZ_CP024882 Location: 1..115736 Organism: Citrobacter freundii strain AR_0022 Replicon: plasmid unitig_1_pilon
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM349_RS24210 () | 383..1003 | + | 621 | WP_061548356.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AM349_RS24215 () | 1000..2874 | + | 1875 | WP_100280313.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AM349_RS24220 () | 2871..3653 | + | 783 | WP_061548431.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AM349_RS24225 () | 3664..4134 | + | 471 | WP_057064239.1 | hypothetical protein | - |
| AM349_RS24235 () | 4349..4948 | + | 600 | WP_057064240.1 | F-type conjugal transfer protein TrbB | - |
| AM349_RS24240 () | 4966..5235 | + | 270 | WP_057064241.1 | hypothetical protein | - |
| AM349_RS24245 () | 5228..6592 | + | 1365 | WP_057064242.1 | conjugal transfer protein TraH | - |
| AM349_RS24250 () | 6592..9882 | + | 3291 | WP_057064243.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AM349_RS24255 () | 9897..10466 | + | 570 | WP_131334063.1 | hypothetical protein | - |
| AM349_RS24260 () | 10771..11502 | + | 732 | WP_057064245.1 | complement resistance protein TraT | - |
| AM349_RS25000 () | 11554..11895 | + | 342 | WP_061548330.1 | hypothetical protein | - |
| AM349_RS24265 () | 11892..12203 | - | 312 | WP_057064246.1 | CcdB family protein | - |
| AM349_RS24270 () | 12200..12448 | - | 249 | WP_049271083.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| AM349_RS24275 () | 12939..14093 | + | 1155 | WP_100280322.1 | Coupling protein TraD | Relaxase |
| AM349_RS24280 () | 14127..14909 | + | 783 | WP_100280314.1 | DsbA family protein | - |
| AM349_RS24285 () | 15517..16374 | + | 858 | WP_100280315.1 | incFII family plasmid replication initiator RepA | - |
| AM349_RS24295 () | 17291..17506 | + | 216 | WP_057102330.1 | DUF2767 family protein | - |
| AM349_RS24300 () | 17826..20957 | + | 3132 | WP_100280316.1 | hypothetical protein | - |
| AM349_RS24305 () | 21310..22314 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| AM349_RS24310 () | 22393..25365 | - | 2973 | WP_001138073.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| AM349_RS24315 () | 25368..25925 | - | 558 | WP_001162012.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| AM349_RS24325 () | 26055..26267 | - | 213 | WP_000993245.1 | DUF3330 domain-containing protein | - |
| AM349_RS24335 () | 26333..26569 | - | 237 | WP_001087807.1 | broad-spectrum mercury transporter MerE | - |
| AM349_RS24340 () | 26566..26931 | - | 366 | WP_001277463.1 | mercury resistance co-regulator MerD | - |
| AM349_RS24345 () | 26949..28631 | - | 1683 | WP_000281123.1 | mercury(II) reductase | - |
| AM349_RS24350 () | 28670..29077 | - | 408 | WP_000522993.1 | organomercurial transporter MerC | - |
| AM349_RS24355 () | 29105..29380 | - | 276 | WP_000732276.1 | mercury resistance system periplasmic binding protein MerP | - |
| AM349_RS24360 () | 29396..29746 | - | 351 | WP_001294660.1 | mercuric transport protein MerT | - |
| AM349_RS24365 () | 29818..30273 | + | 456 | WP_001166628.1 | IS607 family transposase ISChh1 | Transposase |
| AM349_RS24370 () | 30694..30990 | - | 297 | WP_057102331.1 | hypothetical protein | - |
| AM349_RS24375 () | 31088..31840 | - | 753 | WP_072143974.1 | conjugal transfer protein TraX | - |
| AM349_RS24380 () | 32275..32769 | - | 495 | WP_057102333.1 | hypothetical protein | - |
| AM349_RS24385 () | 32807..33313 | - | 507 | WP_057102334.1 | thermonuclease family protein | - |
| AM349_RS24390 () | 33485..33889 | + | 405 | Protein_34 | recombinase family protein | - |
| AM349_RS24395 () | 34017..35150 | - | 1134 | WP_057102335.1 | permease | - |
| AM349_RS24400 () | 35256..35579 | + | 324 | WP_001175593.1 | helix-turn-helix domain-containing protein | - |
| AM349_RS24405 () | 35680..36390 | + | 711 | WP_057102336.1 | arsenical resistance protein ArsH | - |
| AM349_RS24410 () | 36399..36944 | + | 546 | WP_057102337.1 | sigma-70 family RNA polymerase sigma factor | - |
| AM349_RS24415 () | 37020..37382 | + | 363 | WP_057102338.1 | arsenic metallochaperone ArsD family protein | - |
| AM349_RS24420 () | 37409..39160 | + | 1752 | WP_023171140.1 | Arsenical pump-driving ATPase | VF |
| AM349_RS24425 () | 39234..39602 | - | 369 | WP_011117601.1 | winged helix-turn-helix domain-containing protein | - |
| AM349_RS24430 () | 39665..40477 | - | 813 | WP_011117600.1 | sulfite exporter TauE/SafE family protein | - |
| AM349_RS24435 () | 40689..41225 | + | 537 | WP_032288325.1 | GNAT family N-acetyltransferase | - |
| AM349_RS24440 () | 41261..41686 | - | 426 | WP_057102339.1 | glutaredoxin-dependent arsenate reductase | - |
| AM349_RS24445 () | 41699..42988 | - | 1290 | WP_011117597.1 | arsenite efflux transporter membrane subunit ArsB | - |
| AM349_RS24450 () | 43036..44787 | - | 1752 | WP_057102340.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| AM349_RS24455 () | 44805..45167 | - | 363 | WP_057102341.1 | arsenite efflux transporter metallochaperone ArsD | - |
| AM349_RS24460 () | 45214..45567 | - | 354 | WP_077757418.1 | transcriptional regulator | - |
| AM349_RS24465 () | 45751..46521 | + | 771 | WP_058805867.1 | 4Fe-4S dicluster domain-containing protein | - |
| AM349_RS24470 () | 46525..47532 | + | 1008 | WP_057102343.1 | hypothetical protein | - |
| AM349_RS24475 () | 47529..50555 | + | 3027 | WP_057102344.1 | molybdopterin-dependent oxidoreductase | - |
| AM349_RS24480 () | 50565..51146 | + | 582 | WP_057102345.1 | hypothetical protein | - |
| AM349_RS24485 () | 51266..51700 | - | 435 | WP_057102346.1 | dual specificity protein phosphatase family protein | - |
| AM349_RS25005 () | 53203..53376 | + | 174 | WP_156485358.1 | hypothetical protein | - |
| AM349_RS24500 () | 53608..53832 | - | 225 | WP_057102348.1 | hypothetical protein | - |
| AM349_RS24505 () | 53942..54421 | - | 480 | WP_057102352.1 | arsenate reductase ArsC | - |
| AM349_RS24510 () | 54426..54797 | - | 372 | WP_057103093.1 | helix-turn-helix domain-containing protein | - |
| AM349_RS24515 () | 54904..56340 | + | 1437 | WP_057102349.1 | glutathione synthase | - |
| AM349_RS24525 () | 57053..58090 | + | 1038 | WP_057064850.1 | hypothetical protein | - |
| AM349_RS24530 () | 58213..59010 | - | 798 | WP_001750026.1 | IS21 family transposase ISEc62 | Transposase |
| AM349_RS24535 () | 59010..60182 | - | 1173 | WP_057064851.1 | IS21 family transposase IS21 | Transposase |
| AM349_RS24545 () | 60553..61515 | - | 963 | WP_057064852.1 | hypothetical protein | - |
| AM349_RS24550 () | 61512..61775 | - | 264 | WP_057064853.1 | hypothetical protein | - |
| AM349_RS24555 () | 62089..62268 | + | 180 | WP_004118349.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| AM349_RS24560 () | 62255..62552 | + | 298 | Protein_65 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AM349_RS24565 () | 62731..63165 | - | 435 | WP_057064174.1 | hypothetical protein | - |
| AM349_RS24570 () | 63381..64781 | - | 1401 | WP_057064175.1 | copper resistance membrane spanning protein PcoS | - |
| AM349_RS24575 () | 64778..65458 | - | 681 | WP_001188930.1 | Transcriptional activator protein CopR | VF |
| AM349_RS24580 () | 65513..66442 | - | 930 | WP_057064176.1 | copper resistance inner membrane protein PcoD | - |
| AM349_RS24585 () | 66447..66827 | - | 381 | WP_000025662.1 | copper resistance system metallochaperone PcoC | - |
| AM349_RS24590 () | 66867..67757 | - | 891 | WP_074133539.1 | copper resistance outer membrane transporter PcoB | - |
| AM349_RS24595 () | 67763..69580 | - | 1818 | WP_000925242.1 | multicopper oxidase PcoA | - |
| AM349_RS24600 () | 69815..70264 | + | 450 | WP_001023257.1 | copper resistance protein | - |
| AM349_RS24605 () | 70553..71290 | + | 738 | WP_000287501.1 | Murein DD-endopeptidase MepM | VF |
| AM349_RS24610 () | 71324..71521 | - | 198 | WP_000843494.1 | DUF2933 domain-containing protein | - |
| AM349_RS24615 () | 71562..74009 | - | 2448 | WP_057064177.1 | Ag(+)-translocating P-type ATPase SilP | - |
| AM349_RS24620 () | 74136..74576 | - | 441 | WP_000758228.1 | hypothetical protein | - |
| AM349_RS24625 () | 74663..77809 | - | 3147 | WP_000574029.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| AM349_RS24630 () | 77820..79112 | - | 1293 | WP_000157620.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| AM349_RS24635 () | 79226..79579 | - | 354 | WP_008786772.1 | cation efflux system protein CusF | - |
| AM349_RS24640 () | 79608..80993 | - | 1386 | WP_038633711.1 | Cation efflux system protein CusC | VF |
| AM349_RS24650 () | 81183..81863 | + | 681 | WP_038633715.1 | Transcriptional regulatory protein CusR | VF |
| AM349_RS24655 () | 81856..83331 | + | 1476 | WP_057064178.1 | copper/silver sensor histidine kinase SilS | - |
| AM349_RS24660 () | 83577..84008 | + | 432 | WP_053263389.1 | hypothetical protein | - |
| AM349_RS24665 () | 84154..84504 | + | 351 | WP_007871800.1 | DUF305 domain-containing protein | - |
| AM349_RS24670 () | 84912..85820 | - | 909 | WP_007374408.1 | HNH endonuclease | - |
| AM349_RS24675 () | 87237..87656 | + | 420 | WP_057064180.1 | hypothetical protein | - |
| AM349_RS24680 () | 87703..88125 | + | 423 | WP_057064181.1 | hypothetical protein | - |
| AM349_RS24685 () | 88122..88904 | + | 783 | WP_057064182.1 | site-specific integrase | - |
| AM349_RS24695 () | 89331..90617 | - | 1287 | WP_057064183.1 | DUF1173 family protein | - |
| AM349_RS24700 () | 90837..91463 | + | 627 | WP_008322831.1 | ParA family protein | - |
| AM349_RS24705 () | 91505..91732 | + | 228 | WP_008322833.1 | hypothetical protein | - |
| AM349_RS24710 () | 92254..93006 | - | 753 | WP_057064184.1 | replication initiation protein RepE | - |
| AM349_RS24715 () | 93452..94726 | - | 1275 | WP_057064185.1 | Y-family DNA polymerase | - |
| AM349_RS24720 () | 94726..95148 | - | 423 | WP_057064186.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AM349_RS24725 () | 95440..96393 | + | 954 | WP_057064187.1 | plasmid segregation protein ParM | - |
| AM349_RS24730 () | 96399..96773 | + | 375 | WP_057064188.1 | plasmid partitioning/stability family protein | - |
| AM349_RS24735 () | 96775..97104 | + | 330 | WP_057064189.1 | hypothetical protein | - |
| AM349_RS24745 () | 97574..97924 | + | 351 | Protein_99 | DUF1281 domain-containing protein | - |
| AM349_RS24750 () | 97923..98183 | + | 261 | WP_100280323.1 | hypothetical protein | - |
| - () | 98232..98356 | + | 125 | NuclAT_0 | - | - |
| - () | 98232..98356 | + | 125 | NuclAT_0 | - | - |
| - () | 98232..98356 | + | 125 | NuclAT_0 | - | - |
| - () | 98232..98356 | + | 125 | NuclAT_0 | - | - |
| AM349_RS24760 () | 98477..99817 | + | 1341 | WP_058671058.1 | ISNCY family transposase ISCARN112 | Transposase |
| AM349_RS24765 () | 100460..101032 | + | 573 | WP_001515348.1 | cytochrome b/b6 domain-containing protein | - |
| AM349_RS24770 () | 101232..102155 | + | 924 | WP_000167917.1 | cation diffusion facilitator family transporter | - |
| AM349_RS24780 () | 102418..102657 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| AM349_RS24785 () | 102657..102944 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| AM349_RS24790 () | 103016..103174 | + | 159 | WP_079897042.1 | type I toxin-antitoxin system Hok family toxin | - |
| AM349_RS25010 () | 103217..103396 | + | 180 | WP_131403754.1 | hypothetical protein | - |
| AM349_RS24805 () | 103955..104248 | + | 294 | WP_061548396.1 | hypothetical protein | - |
| AM349_RS24810 () | 104260..105081 | + | 822 | WP_061548395.1 | DUF945 domain-containing protein | - |
| AM349_RS24815 () | 105111..105644 | - | 534 | WP_061548394.1 | hypothetical protein | VF |
| AM349_RS24820 () | 106299..106691 | + | 393 | WP_100280319.1 | relaxosome protein TraM | - |
| AM349_RS24825 () | 106723..107364 | - | 642 | WP_061548344.1 | Arc family DNA-binding protein | - |
| AM349_RS24830 () | 107563..107916 | + | 354 | WP_061548345.1 | conjugal transfer protein TraA | - |
| AM349_RS24835 () | 107919..108221 | + | 303 | WP_061548346.1 | type IV conjugative transfer system protein TraL | - |
| AM349_RS24840 () | 108227..108811 | + | 585 | WP_061548347.1 | conjugal transfer protein TraE | - |
| AM349_RS24845 () | 108823..109563 | + | 741 | WP_061548348.1 | type-F conjugative transfer system secretin TraK | - |
| AM349_RS24850 () | 109560..110969 | + | 1410 | WP_061548349.1 | conjugal transfer protein TraB | - |
| AM349_RS24855 () | 110975..111478 | + | 504 | WP_131403647.1 | hypothetical protein | - |
| AM349_RS24860 () | 111560..112117 | + | 558 | WP_061548351.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AM349_RS24865 () | 112114..112299 | + | 186 | WP_061548352.1 | hypothetical protein | - |
| AM349_RS24870 () | 112296..114899 | + | 2604 | WP_100280320.1 | type IV secretion system protein TraC | - |
| AM349_RS24875 () | 114896..115267 | + | 372 | WP_100280321.1 | TrbI F-type domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|