MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 88768 bp
Accession: NZ_CP024864 Location: 1..88768 Organism: Escherichia coli strain AR_0015 Replicon: plasmid unitig_2_pilon
Accession: NZ_CP024864 Location: 1..88768 Organism: Escherichia coli strain AR_0015 Replicon: plasmid unitig_2_pilon
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM342_RS27290 () | 381..1074 | + | 694 | Protein_1 | hypothetical protein | - |
| AM342_RS27295 () | 1081..1584 | + | 504 | WP_100190807.1 | DUF2726 domain-containing protein | - |
| AM342_RS27300 () | 1601..1999 | - | 399 | WP_100190808.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| AM342_RS27305 () | 1999..2226 | - | 228 | WP_000450523.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| AM342_RS27310 () | 2359..4545 | + | 2187 | WP_100190809.1 | type IV conjugative transfer system coupling protein TraD | - |
| AM342_RS27315 () | 4545..9722 | + | 5178 | WP_100190810.1 | Multifunctional conjugation protein TraI | Relaxase |
| AM342_RS27320 () | 9722..9943 | + | 222 | WP_053272679.1 | hypothetical protein | - |
| AM342_RS27325 () | 9951..10700 | + | 750 | WP_100190811.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| AM342_RS27330 () | 10775..11332 | + | 558 | WP_100190812.1 | fertility inhibition protein FinO | - |
| AM342_RS27335 () | 11474..11674 | + | 201 | WP_100190813.1 | ANR family transcriptional regulator | - |
| AM342_RS27340 () | 12059..12658 | + | 600 | WP_100190814.1 | hypothetical protein | - |
| AM342_RS27350 () | 13366..13620 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| AM342_RS27360 () | 13859..13933 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| AM342_RS27365 () | 13926..14783 | + | 858 | WP_157787595.1 | incFII family plasmid replication initiator RepA | - |
| AM342_RS27380 () | 15667..15936 | + | 270 | WP_000079931.1 | hypothetical protein | - |
| AM342_RS27385 () | 15933..16215 | + | 283 | Protein_16 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AM342_RS27390 () | 16306..16550 | + | 245 | Protein_17 | type IA DNA topoisomerase | - |
| AM342_RS27395 () | 16661..16954 | + | 294 | WP_000174561.1 | hypothetical protein | - |
| AM342_RS27400 () | 17511..19262 | - | 1752 | Protein_19 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| AM342_RS27405 () | 19251..19658 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| AM342_RS27410 () | 19796..20680 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| AM342_RS27415 () | 20712..21911 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| AM342_RS27420 () | 22017..22667 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| AM342_RS27425 () | 22699..22941 | - | 243 | WP_000844627.1 | transposase | - |
| AM342_RS27430 () | 22999..24255 | - | 1257 | Protein_25 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| AM342_RS27435 () | 24402..25262 | - | 861 | WP_100190819.1 | Beta-lactamase TEM | ARG |
| AM342_RS27440 () | 25445..26002 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| AM342_RS27445 () | 26166..29171 | + | 3006 | WP_001143759.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| AM342_RS27450 () | 29205..30920 | - | 1716 | Protein_29 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| AM342_RS27455 () | 30924..31484 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| AM342_RS27460 () | 31794..33371 | + | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| AM342_RS27465 () | 33763..34785 | - | 1023 | Protein_32 | IS110 family transposase ISSm1 | Transposase |
| AM342_RS27470 () | 35203..36954 | + | 1752 | WP_000038774.1 | ATP-binding protein | - |
| AM342_RS28660 () | 37287..37433 | + | 147 | Protein_34 | 3'-5' exonuclease | - |
| AM342_RS27480 () | 37625..40300 | - | 2676 | WP_021559044.1 | hypothetical protein | - |
| AM342_RS27485 () | 40603..40890 | + | 288 | Protein_36 | DUF4238 domain-containing protein | - |
| AM342_RS27490 () | 40967..41335 | + | 369 | Protein_37 | IS21 family transposase IS640 | Transposase |
| AM342_RS27495 () | 41338..41596 | + | 259 | Protein_38 | integrase core domain-containing protein | - |
| AM342_RS27500 () | 41686..42726 | + | 1041 | WP_157787599.1 | hypothetical protein | - |
| AM342_RS28490 () | 42821..42985 | + | 165 | WP_157787601.1 | hypothetical protein | - |
| AM342_RS28665 () | 43371..43526 | + | 156 | WP_000074142.1 | hypothetical protein | - |
| AM342_RS27515 () | 43575..44568 | + | 994 | Protein_42 | hypothetical protein | - |
| AM342_RS27520 () | 44670..45065 | - | 396 | WP_000445934.1 | plasmid partitioning/stability family protein | - |
| AM342_RS27525 () | 45065..46024 | - | 960 | WP_000921958.1 | plasmid segregation protein ParM | - |
| AM342_RS27535 () | 46463..47365 | + | 903 | WP_100190842.1 | DUF1281 domain-containing protein | - |
| AM342_RS27540 () | 47362..47673 | + | 312 | WP_181263461.1 | hypothetical protein | - |
| AM342_RS27545 () | 47749..48432 | + | 684 | WP_100190822.1 | DNA methylase | - |
| AM342_RS27550 () | 48433..48654 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| AM342_RS27555 () | 48667..49101 | + | 435 | WP_032307291.1 | DUF1380 family protein | - |
| AM342_RS28495 () | 49152..49922 | + | 771 | WP_198432271.1 | hypothetical protein | - |
| AM342_RS27570 () | 50460..50762 | + | 303 | WP_001666994.1 | antirestriction protein | - |
| AM342_RS28670 () | 50811..51002 | + | 192 | WP_050940534.1 | hypothetical protein | - |
| AM342_RS28675 () | 50981..51299 | - | 319 | Protein_53 | pilus assembly protein | - |
| AM342_RS27595 () | 51976..52206 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| AM342_RS27600 () | 52258..53619 | + | 1362 | WP_100190824.1 | DUF3560 domain-containing protein | - |
| AM342_RS27605 () | 53666..54229 | + | 564 | WP_100190825.1 | class I SAM-dependent methyltransferase | - |
| AM342_RS27620 () | 55748..57649 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| AM342_RS27625 () | 57799..58278 | + | 480 | WP_100190827.1 | single-stranded DNA-binding protein | - |
| AM342_RS27630 () | 58336..58569 | + | 234 | WP_000006001.1 | DUF905 family protein | - |
| AM342_RS27635 () | 58635..60599 | + | 1965 | WP_100190828.1 | ParB/RepB/Spo0J family partition protein | - |
| AM342_RS27640 () | 60668..61102 | + | 435 | WP_000845950.1 | conjugation system SOS inhibitor PsiB | - |
| AM342_RS27645 () | 61099..61818 | + | 720 | WP_100190829.1 | plasmid SOS inhibition protein A | - |
| - () | 61830..62046 | + | 217 | NuclAT_0 | - | - |
| - () | 61830..62046 | + | 217 | NuclAT_0 | - | - |
| - () | 61830..62046 | + | 217 | NuclAT_0 | - | - |
| - () | 61830..62046 | + | 217 | NuclAT_0 | - | - |
| AM342_RS27650 () | 62092..62253 | + | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | - |
| AM342_RS28680 () | 62562..62858 | - | 297 | Protein_64 | hypothetical protein | - |
| AM342_RS27660 () | 63157..63453 | + | 297 | WP_089679329.1 | hypothetical protein | - |
| AM342_RS27665 () | 63559..64380 | + | 822 | WP_157787603.1 | DUF945 domain-containing protein | - |
| AM342_RS27670 () | 64659..65111 | - | 453 | WP_001469955.1 | hypothetical protein | VF |
| AM342_RS27680 () | 65624..66019 | + | 396 | WP_001137965.1 | relaxosome protein TraM | - |
| AM342_RS27685 () | 66181..66912 | + | 732 | WP_001062164.1 | hypothetical protein | - |
| AM342_RS27690 () | 66996..67202 | + | 207 | WP_001288097.1 | TraY domain-containing protein | - |
| AM342_RS27695 () | 67503..67874 | + | 372 | WP_000829448.1 | conjugal transfer protein TraA | - |
| AM342_RS27700 () | 67893..68192 | + | 300 | WP_000012423.1 | type IV conjugative transfer system protein TraL | - |
| AM342_RS27705 () | 68207..68785 | + | 579 | WP_000365872.1 | type IV conjugative transfer system protein TraE | - |
| AM342_RS27710 () | 68760..69539 | + | 780 | WP_000746392.1 | type-F conjugative transfer system secretin TraK | - |
| AM342_RS27715 () | 69532..70878 | + | 1347 | WP_100190831.1 | conjugal transfer protein TraB | - |
| AM342_RS27720 () | 70875..71408 | + | 534 | WP_000801207.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AM342_RS27725 () | 71405..74044 | + | 2640 | WP_000138564.1 | type IV secretion system protein TraC | - |
| AM342_RS27730 () | 74023..74439 | + | 417 | WP_100190832.1 | type-F conjugative transfer system protein TrbI | - |
| AM342_RS27735 () | 74442..74666 | + | 225 | WP_000752802.1 | TraR/DksA C4-type zinc finger protein | - |
| AM342_RS27740 () | 74663..75280 | + | 618 | WP_000871842.1 | type-F conjugative transfer system protein TraW | - |
| AM342_RS27745 () | 75277..76275 | + | 999 | WP_000619924.1 | conjugal transfer pilus assembly protein TraU | - |
| AM342_RS27750 () | 76284..76769 | + | 486 | WP_100190833.1 | hypothetical protein | - |
| AM342_RS27755 () | 76945..77209 | + | 265 | Protein_83 | hypothetical protein | - |
| AM342_RS27760 () | 77196..77504 | + | 309 | WP_001026252.1 | conjugal transfer protein TrbD | - |
| AM342_RS27765 () | 77705..78277 | + | 573 | WP_041031396.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AM342_RS27770 () | 78274..80208 | + | 1935 | WP_100190834.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AM342_RS27775 () | 80210..80995 | + | 786 | WP_100190835.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AM342_RS27780 () | 81013..81285 | + | 273 | WP_000196432.1 | hypothetical protein | - |
| AM342_RS27785 () | 81287..81859 | + | 573 | WP_100190836.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AM342_RS27790 () | 81948..82364 | + | 417 | WP_157787605.1 | hypothetical protein | - |
| AM342_RS27795 () | 82584..82961 | + | 378 | WP_100190838.1 | conjugal transfer protein TrbF | - |
| AM342_RS27800 () | 83025..84431 | + | 1407 | WP_100190839.1 | conjugal transfer protein TraH | - |
| AM342_RS27805 () | 84431..87304 | + | 2874 | WP_100190840.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AM342_RS27810 () | 87319..88212 | + | 894 | WP_100190841.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|