MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 43177 bp
Accession: NZ_CP024862 Location: 1566239..1609415 Organism: Escherichia coli strain AR_0015 Replicon: chromosome
Accession: NZ_CP024862 Location: 1566239..1609415 Organism: Escherichia coli strain AR_0015 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM342_RS07915 () | 1561540..1562796 | + | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
| AM342_RS07920 () | 1562845..1564980 | - | 2136 | WP_000839790.1 | ornithine decarboxylase | - |
| AM342_RS28740 () | 1565143..1565220 | - | 78 | WP_212734103.1 | hypothetical protein | - |
| AM342_RS07930 () | 1565373..1566080 | + | 708 | WP_000234533.1 | DUF554 domain-containing protein | - |
| AM342_RS07940 () | 1566459..1567721 | + | 1263 | WP_001218875.1 | Prophage integrase IntS ; Integrase | Integrase |
| AM342_RS07950 () | 1568173..1571688 | + | 3516 | WP_001744318.1 | ATP-binding protein | - |
| AM342_RS07955 () | 1571797..1573296 | - | 1500 | WP_100190777.1 | phosphoethanolamine transferase | - |
| AM342_RS07960 () | 1573470..1574210 | - | 741 | WP_001477155.1 | porin family protein | - |
| AM342_RS07970 () | 1574823..1576472 | + | 1650 | WP_001274542.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| AM342_RS07975 () | 1576477..1577802 | + | 1326 | WP_000283233.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| AM342_RS07980 () | 1577783..1582837 | + | 5055 | WP_047659779.1 | DNA phosphorothioation-dependent restriction protein DptH | - |
| AM342_RS28280 () | 1582875..1583393 | + | 519 | WP_001327223.1 | accessory gene regulator B family protein | - |
| AM342_RS07990 () | 1583394..1583699 | + | 306 | WP_000071509.1 | hypothetical protein | - |
| AM342_RS07995 () | 1583748..1584554 | + | 807 | WP_071533805.1 | DGQHR domain-containing protein | - |
| AM342_RS08000 () | 1584613..1584969 | - | 357 | WP_000937304.1 | DNA sulfur modification protein DndE | - |
| AM342_RS08005 () | 1584969..1586969 | - | 2001 | WP_000905896.1 | DNA sulfur modification protein DndD | - |
| AM342_RS08010 () | 1586959..1588593 | - | 1635 | WP_000041168.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| AM342_RS08015 () | 1588590..1589675 | - | 1086 | WP_000179014.1 | DNA sulfur modification protein DndB | - |
| AM342_RS08020 () | 1590138..1590311 | + | 174 | WP_000258195.1 | hypothetical protein | - |
| AM342_RS08025 () | 1590308..1590652 | + | 345 | Protein_1486 | prop effector | - |
| AM342_RS08030 () | 1590671..1591219 | - | 549 | WP_001167422.1 | hypothetical protein | - |
| AM342_RS28560 () | 1591307..1591465 | - | 159 | WP_000831911.1 | hypothetical protein | - |
| AM342_RS08035 () | 1591462..1591698 | - | 237 | WP_000958149.1 | AlpA family transcriptional regulator | - |
| AM342_RS08040 () | 1591767..1592342 | - | 576 | WP_021552454.1 | hypothetical protein | - |
| AM342_RS08045 () | 1592590..1593156 | - | 567 | WP_001126822.1 | inovirus-type Gp2 protein | - |
| AM342_RS08050 () | 1594190..1594539 | + | 350 | Protein_1492 | IS21 family transposase | - |
| AM342_RS08055 () | 1594569..1594697 | - | 129 | Protein_1493 | IS256 family transposase | - |
| AM342_RS08060 () | 1594966..1595406 | - | 441 | WP_000038139.1 | H-NS histone family protein | - |
| AM342_RS08065 () | 1595627..1596402 | + | 776 | Protein_1495 | DDE-type integrase/transposase/recombinase | - |
| AM342_RS08070 () | 1596535..1597109 | - | 575 | Protein_1496 | transposase | - |
| AM342_RS08075 () | 1597163..1598041 | - | 879 | WP_000769116.1 | restriction endonuclease | - |
| AM342_RS08080 () | 1598369..1599100 | - | 732 | WP_001075464.1 | inovirus Gp2 family protein | - |
| AM342_RS08085 () | 1600596..1601726 | - | 1131 | WP_000147749.1 | hypothetical protein | - |
| AM342_RS08090 () | 1601911..1602795 | + | 885 | WP_000010408.1 | 50S ribosome-binding GTPase | - |
| AM342_RS08095 () | 1602998..1603678 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| AM342_RS08100 () | 1603826..1604503 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| AM342_RS08105 () | 1604533..1604742 | + | 210 | WP_032150870.1 | DUF905 family protein | - |
| AM342_RS08110 () | 1604832..1605650 | + | 819 | WP_001175175.1 | DUF945 domain-containing protein | - |
| AM342_RS08115 () | 1605742..1606227 | + | 486 | WP_000213722.1 | antirestriction protein | - |
| AM342_RS08120 () | 1606242..1606718 | + | 477 | WP_001384029.1 | RadC family protein | - |
| AM342_RS08125 () | 1606805..1607026 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| AM342_RS08130 () | 1607106..1607474 | + | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| AM342_RS08135 () | 1607564..1607941 | + | 378 | WP_001094444.1 | TA system toxin CbtA family protein | Toxin Detail |
| AM342_RS08140 () | 1607938..1608087 | + | 150 | Protein_1510 | hypothetical protein | - |
| AM342_RS08145 () | 1608163..1608360 | + | 198 | WP_023563519.1 | DUF957 domain-containing protein | - |
| AM342_RS08150 () | 1608445..1609288 | + | 844 | Protein_1512 | DUF4942 domain-containing protein | - |
| AM342_RS08155 () | 1609631..1609801 | + | 171 | Protein_1513 | IS110 family transposase | - |
| AM342_RS08160 () | 1610612..1611595 | + | 984 | WP_001298261.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| AM342_RS08165 () | 1611667..1612815 | + | 1149 | WP_000905922.1 | capsule polysaccharide export inner-membrane protein KpsE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|