MGE detailed information
MGE type: Prophage MGE length: 54071 bp
Accession: NZ_CP024851 Location: 3515687..3569757 Organism: Escherichia coli strain AR_0006 Replicon: chromosome
Accession: NZ_CP024851 Location: 3515687..3569757 Organism: Escherichia coli strain AR_0006 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM333_RS18100 () | 3512200..3512946 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| AM333_RS18105 () | 3513035..3513721 | + | 687 | WP_000215553.1 | DNA-binding transcriptional regulator YdfH | - |
| AM333_RS18110 () | 3513899..3514102 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| AM333_RS18115 () | 3514138..3515598 | - | 1461 | WP_000527786.1 | mannitol dehydrogenase family protein | - |
| AM333_RS18120 () | 3515687..3516970 | - | 1284 | Protein_3264 | MHS family MFS transporter YdfJ | - |
| AM333_RS28105 () | 3517574..3517687 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| AM333_RS18125 () | 3517756..3517989 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| AM333_RS18130 () | 3518306..3518896 | + | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| AM333_RS18135 () | 3518994..3519104 | - | 111 | Protein_3268 | tail fiber assembly protein | - |
| AM333_RS18140 () | 3519124..3519417 | - | 294 | WP_000355609.1 | hypothetical protein | - |
| AM333_RS18145 () | 3519428..3520132 | - | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| AM333_RS18150 () | 3520142..3520423 | - | 282 | WP_000654154.1 | hypothetical protein | - |
| AM333_RS18155 () | 3520420..3522819 | - | 2400 | WP_032152843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| AM333_RS18160 () | 3522884..3523483 | - | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| AM333_RS18165 () | 3523551..3527030 | - | 3480 | WP_021523093.1 | host specificity protein J | - |
| AM333_RS18170 () | 3527091..3527693 | - | 603 | WP_049286672.1 | tail assembly protein | - |
| AM333_RS18175 () | 3527630..3528373 | - | 744 | WP_032153655.1 | C40 family peptidase | - |
| AM333_RS18180 () | 3528379..3529077 | - | 699 | WP_001551186.1 | phage minor tail protein L | - |
| AM333_RS18185 () | 3529077..3529406 | - | 330 | WP_000847345.1 | phage tail protein | - |
| AM333_RS18190 () | 3529403..3531964 | - | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| AM333_RS18195 () | 3531957..3532391 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| AM333_RS18200 () | 3532373..3532795 | - | 423 | WP_000479153.1 | phage minor tail protein G | - |
| AM333_RS18205 () | 3532811..3533551 | - | 741 | WP_001349920.1 | phage tail protein | - |
| AM333_RS18210 () | 3533559..3533954 | - | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| AM333_RS18215 () | 3533951..3534529 | - | 579 | WP_000975070.1 | phage tail protein | - |
| AM333_RS18220 () | 3534541..3534894 | - | 354 | WP_000752979.1 | head-tail joining protein | - |
| AM333_RS18225 () | 3534906..3535304 | - | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| AM333_RS18230 () | 3535346..3536371 | - | 1026 | WP_000063277.1 | major capsid protein | - |
| AM333_RS18235 () | 3536426..3536758 | - | 333 | WP_001708751.1 | head decoration protein | - |
| AM333_RS18240 () | 3536768..3538087 | - | 1320 | WP_020233915.1 | S49 family peptidase | - |
| AM333_RS18245 () | 3538068..3539669 | - | 1602 | WP_001356819.1 | phage portal protein | - |
| AM333_RS18250 () | 3539666..3539872 | - | 207 | WP_000198149.1 | gpW family protein | - |
| AM333_RS18255 () | 3539869..3541794 | - | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| AM333_RS18260 () | 3541769..3542314 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| AM333_RS18265 () | 3542703..3542936 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| AM333_RS18270 () | 3542994..3543404 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| AM333_RS18275 () | 3543556..3543729 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| AM333_RS28110 () | 3543901..3544056 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| AM333_RS28115 () | 3544136..3544201 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| AM333_RS18285 () | 3544204..3544392 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| AM333_RS18290 () | 3544403..3544615 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| AM333_RS18295 () | 3544978..3545475 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| AM333_RS18300 () | 3545472..3546005 | - | 534 | WP_001092971.1 | lysozyme | - |
| AM333_RS18305 () | 3546002..3546313 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| AM333_RS18310 () | 3546318..3546533 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| AM333_RS28555 () | 3546753..3546923 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| AM333_RS18315 () | 3547090..3547548 | - | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| AM333_RS18325 () | 3547999..3548214 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| AM333_RS18330 () | 3548515..3548727 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| AM333_RS28120 () | 3548782..3548871 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| AM333_RS18335 () | 3549149..3549901 | - | 753 | WP_001047135.1 | antitermination protein | - |
| AM333_RS18340 () | 3549915..3550964 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| AM333_RS18345 () | 3550966..3551244 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| AM333_RS18350 () | 3551311..3551562 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| AM333_RS18355 () | 3551779..3551934 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| AM333_RS18360 () | 3552006..3552293 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| AM333_RS18365 () | 3552293..3552532 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| AM333_RS18370 () | 3552557..3552862 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| AM333_RS18375 () | 3553065..3553397 | + | 333 | WP_001301033.1 | protein FlxA | - |
| AM333_RS18385 () | 3553834..3555147 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| AM333_RS18390 () | 3555631..3556659 | - | 1029 | WP_001345551.1 | DUF4868 domain-containing protein | - |
| AM333_RS18395 () | 3556656..3557270 | - | 615 | WP_001265627.1 | hypothetical protein | - |
| AM333_RS18400 () | 3557479..3558144 | - | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| AM333_RS18405 () | 3558347..3558745 | - | 399 | WP_001151242.1 | DUF977 family protein | - |
| AM333_RS18410 () | 3558786..3559751 | - | 966 | WP_000054487.1 | hypothetical protein | - |
| AM333_RS18415 () | 3559732..3560253 | - | 522 | WP_000705355.1 | hypothetical protein | - |
| AM333_RS18420 () | 3560237..3560464 | - | 228 | WP_000921596.1 | transcriptional regulator | - |
| AM333_RS18425 () | 3560545..3560952 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| AM333_RS18430 () | 3561121..3561276 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| AM333_RS18435 () | 3561278..3561853 | + | 576 | WP_000344950.1 | hypothetical protein | - |
| AM333_RS18440 () | 3562340..3562528 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| AM333_RS18445 () | 3562525..3562716 | + | 192 | WP_001083276.1 | lysis protein YdfD | - |
| AM333_RS18450 () | 3562810..3565281 | + | 2472 | WP_000048363.1 | exonuclease | - |
| AM333_RS18455 () | 3565354..3565605 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| AM333_RS18465 () | 3565676..3566353 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| AM333_RS18470 () | 3566353..3566700 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| AM333_RS18475 () | 3566720..3568291 | + | 1572 | WP_029392005.1 | IS66 family transposase ISCro1 | Transposase |
| AM333_RS18480 () | 3568347..3569627 | + | 1281 | WP_021523105.1 | Putative defective protein IntQ ; Integrase | Integrase |
| AM333_RS18490 () | 3569815..3570834 | - | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| AM333_RS18495 () | 3570846..3572060 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| AM333_RS18505 () | 3572266..3572592 | - | 327 | WP_001314753.1 | YnfA family protein | - |
| AM333_RS18510 () | 3572727..3573068 | + | 342 | WP_000705205.1 | DUF1283 family protein | - |
| AM333_RS18515 () | 3573103..3573663 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| AM333_RS18520 () | 3573666..3574376 | - | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|