MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 41413 bp
Accession: NZ_CP024842 Location: 1699718..1741130 Organism: Pectobacterium versatile strain 3-2 Replicon: chromosome
Accession: NZ_CP024842 Location: 1699718..1741130 Organism: Pectobacterium versatile strain 3-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OA04_RS07675 () | 1694898..1695464 | - | 567 | WP_107332612.1 | TetR/AcrR family transcriptional regulator | - |
| OA04_RS07680 () | 1695602..1696693 | + | 1092 | WP_107332613.1 | alkene reductase | - |
| OA04_RS07685 () | 1696769..1697551 | + | 783 | WP_040031375.1 | SDR family oxidoreductase | - |
| OA04_RS07690 () | 1697646..1698464 | + | 819 | WP_040031376.1 | oxidoreductase | - |
| OA04_RS07695 () | 1698472..1699491 | + | 1020 | WP_107332614.1 | NADP-dependent oxidoreductase | - |
| OA04_RS07705 () | 1700135..1701220 | + | 1086 | WP_043898777.1 | DNA (cytosine-5-)-methyltransferase | - |
| OA04_RS07710 () | 1701226..1704024 | + | 2799 | WP_107332616.1 | hypothetical protein | - |
| OA04_RS07715 () | 1704109..1706910 | + | 2802 | WP_191089096.1 | kinetochore protein | - |
| OA04_RS07720 () | 1706925..1712885 | + | 5961 | WP_107332617.1 | DEAD/DEAH box helicase | - |
| OA04_RS07725 () | 1712893..1714050 | + | 1158 | WP_014699355.1 | PD-(D/E)XK nuclease family protein | - |
| OA04_RS07730 () | 1714899..1715843 | + | 945 | WP_014699356.1 | DUF1738 domain-containing protein | - |
| OA04_RS07735 () | 1716162..1716398 | + | 237 | WP_014699357.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| OA04_RS07740 () | 1716401..1716715 | + | 315 | WP_014699358.1 | CcdB family protein | Toxin Detail |
| OA04_RS07750 () | 1716963..1717367 | - | 405 | WP_107333697.1 | hypothetical protein | - |
| OA04_RS07755 () | 1717405..1717953 | - | 549 | WP_107332618.1 | hypothetical protein | - |
| OA04_RS07760 () | 1718335..1719492 | + | 1158 | WP_107332619.1 | hypothetical protein | - |
| OA04_RS07765 () | 1719659..1720405 | - | 747 | WP_107332620.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| OA04_RS07770 () | 1720414..1721844 | - | 1431 | WP_107332621.1 | hypothetical protein | - |
| OA04_RS07785 () | 1722570..1722872 | - | 303 | WP_107332624.1 | conjugal transfer protein | - |
| OA04_RS07790 () | 1722916..1723932 | - | 1017 | WP_107332625.1 | Type IV secretion system protein VirB11 | VF |
| OA04_RS07795 () | 1723922..1725154 | - | 1233 | WP_107332626.1 | Type IV secretion system protein virB10 | VF |
| OA04_RS07800 () | 1725151..1726041 | - | 891 | WP_107332627.1 | P-type conjugative transfer protein VirB9 | - |
| OA04_RS07805 () | 1726041..1726724 | - | 684 | WP_107332628.1 | Type IV secretion system protein PtlE | VF |
| OA04_RS22870 () | 1726717..1726857 | - | 141 | WP_191089097.1 | hypothetical protein | - |
| OA04_RS07810 () | 1726937..1727977 | - | 1041 | WP_107332629.1 | type IV secretion system protein | - |
| OA04_RS07815 () | 1727989..1728213 | - | 225 | WP_100017243.1 | EexN family lipoprotein | - |
| OA04_RS07820 () | 1728224..1728940 | - | 717 | WP_107332630.1 | type IV secretion system protein | - |
| OA04_RS07825 () | 1728964..1731711 | - | 2748 | WP_107332631.1 | Type IV secretion system protein virB4 | VF |
| OA04_RS07830 () | 1731721..1732002 | - | 282 | WP_107332632.1 | TrbC/VirB2 family protein | - |
| OA04_RS07835 () | 1731999..1732664 | - | 666 | WP_107332633.1 | Type IV secretion system protein virB1 | VF |
| OA04_RS07840 () | 1732745..1732966 | - | 222 | WP_107332634.1 | hypothetical protein | - |
| OA04_RS07850 () | 1733477..1733749 | + | 273 | WP_107332636.1 | hypothetical protein | - |
| OA04_RS07855 () | 1733761..1734039 | + | 279 | WP_125226387.1 | hypothetical protein | - |
| OA04_RS07860 () | 1734026..1734256 | + | 231 | WP_107332638.1 | HNH endonuclease | - |
| OA04_RS07865 () | 1734754..1735620 | + | 867 | WP_107332639.1 | phage exclusion protein | - |
| OA04_RS07870 () | 1735826..1736035 | - | 210 | WP_107332640.1 | TraR/DksA family transcriptional regulator | - |
| OA04_RS07875 () | 1736025..1736609 | - | 585 | WP_107332641.1 | DUF2857 domain-containing protein | - |
| OA04_RS07880 () | 1736626..1736820 | - | 195 | WP_107332642.1 | AlpA family transcriptional regulator | - |
| OA04_RS07885 () | 1736974..1737888 | - | 915 | WP_107332643.1 | hypothetical protein | - |
| OA04_RS07890 () | 1738303..1738575 | - | 273 | WP_014699383.1 | helix-turn-helix domain-containing protein | - |
| OA04_RS07895 () | 1738737..1739036 | + | 300 | WP_107333698.1 | helix-turn-helix domain-containing protein | - |
| OA04_RS07900 () | 1739220..1739534 | + | 315 | WP_039551213.1 | helix-turn-helix domain-containing protein | - |
| OA04_RS07905 () | 1739669..1740941 | - | 1273 | Protein_1505 | tyrosine-type recombinase/integrase | - |
| OA04_RS07915 () | 1741570..1741839 | + | 270 | Protein_1506 | LysR family transcriptional regulator | - |
| OA04_RS07920 () | 1742232..1742498 | + | 267 | WP_010308275.1 | anti-adapter protein IraP | - |
| OA04_RS07925 () | 1742669..1744081 | - | 1413 | WP_107332644.1 | D-serine/D-alanine/glycine transporter | - |
| OA04_RS07935 () | 1744957..1745244 | + | 288 | WP_010308281.1 | hypothetical protein | - |
| OA04_RS07940 () | 1745338..1745562 | - | 225 | WP_010279363.1 | DUF2594 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|