MGE detailed information
MGE type: Prophage MGE length: 26500 bp
Accession: NZ_CP024830 Location: 3382720..3409219 Organism: Escherichia coli strain CREC-532 Replicon: chromosome
Accession: NZ_CP024830 Location: 3382720..3409219 Organism: Escherichia coli strain CREC-532 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CU076_RS17395 () | 3379235..3379981 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| CU076_RS17400 () | 3380070..3380756 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| CU076_RS17405 () | 3380933..3381136 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CU076_RS17410 () | 3381171..3382631 | - | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| CU076_RS17415 () | 3382720..3384087 | - | 1368 | Protein_3159 | MHS family MFS transporter | - |
| CU076_RS27485 () | 3384608..3384721 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| CU076_RS17420 () | 3384790..3385023 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| CU076_RS17425 () | 3385340..3385930 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| CU076_RS17430 () | 3386028..3386603 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| CU076_RS27775 () | 3386603..3387337 | - | 735 | Protein_3164 | tail fiber protein | - |
| CU076_RS27780 () | 3387359..3388408 | - | 1050 | Protein_3165 | phage terminase large subunit family protein | - |
| CU076_RS17440 () | 3388383..3388928 | - | 546 | WP_000453611.1 | DNA-packaging protein | - |
| CU076_RS17450 () | 3389317..3389550 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| CU076_RS17455 () | 3389608..3390018 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| CU076_RS17460 () | 3390170..3390343 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| CU076_RS27490 () | 3390515..3390670 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| CU076_RS27495 () | 3390750..3390815 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| CU076_RS17470 () | 3390818..3391006 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| CU076_RS17475 () | 3391017..3391229 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| CU076_RS17480 () | 3391592..3392089 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| CU076_RS17485 () | 3392086..3392619 | - | 534 | WP_001092971.1 | lysozyme | - |
| CU076_RS17490 () | 3392616..3392927 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| CU076_RS17495 () | 3392932..3393147 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| CU076_RS28065 () | 3393367..3393537 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| CU076_RS17500 () | 3393901..3394116 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| CU076_RS17505 () | 3394417..3394629 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| CU076_RS27500 () | 3394684..3394773 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| CU076_RS17510 () | 3395051..3395803 | - | 753 | WP_001047135.1 | antitermination protein | - |
| CU076_RS17515 () | 3395817..3396866 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| CU076_RS17520 () | 3396868..3397146 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| CU076_RS17525 () | 3397213..3397464 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| CU076_RS17530 () | 3397681..3397836 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CU076_RS17535 () | 3397908..3398195 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CU076_RS17540 () | 3398195..3398434 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CU076_RS17545 () | 3398459..3398764 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| CU076_RS17550 () | 3398967..3399299 | + | 333 | WP_001301033.1 | protein FlxA | - |
| CU076_RS17560 () | 3399736..3401049 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| CU076_RS27785 () | 3401818..3402105 | - | 288 | Protein_3192 | hypothetical protein | - |
| CU076_RS17575 () | 3402327..3402425 | + | 99 | Protein_3193 | IS66 family transposase ISEc22 | Transposase |
| CU076_RS17580 () | 3402473..3402706 | + | 234 | WP_001341330.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CU076_RS17585 () | 3402755..3404290 | + | 1536 | WP_001333339.1 | IS66 family transposase ISEc22 | Transposase |
| CU076_RS17590 () | 3404810..3405166 | - | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| CU076_RS17595 () | 3405163..3405585 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| CU076_RS17600 () | 3405626..3405883 | - | 258 | Protein_3198 | hypothetical protein | - |
| CU076_RS17605 () | 3405871..3407580 | + | 1710 | Protein_3199 | 3'-5' exoribonuclease | - |
| CU076_RS17610 () | 3407653..3407904 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| CU076_RS17615 () | 3407939..3409219 | + | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| CU076_RS17625 () | 3409407..3410426 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| CU076_RS17630 () | 3410438..3411652 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| CU076_RS17640 () | 3411858..3412184 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| CU076_RS17645 () | 3412319..3412660 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| CU076_RS17650 () | 3412695..3413255 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| CU076_RS17655 () | 3413258..3413968 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|