MGE detailed information
MGE type: Prophage MGE length: 33527 bp
Accession: NZ_CP024815 Location: 3016471..3049997 Organism: Escherichia coli strain CREC-629 Replicon: chromosome
Accession: NZ_CP024815 Location: 3016471..3049997 Organism: Escherichia coli strain CREC-629 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CU080_RS15465 () | 3011852..3012562 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| CU080_RS15470 () | 3012565..3013125 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| CU080_RS15475 () | 3013160..3013501 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| CU080_RS15480 () | 3013636..3013962 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| CU080_RS15490 () | 3014168..3015382 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| CU080_RS15495 () | 3015394..3016413 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| CU080_RS15505 () | 3016601..3017881 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| CU080_RS15510 () | 3017916..3018167 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| CU080_RS15515 () | 3018240..3019949 | - | 1710 | Protein_2814 | 3'-5' exoribonuclease | - |
| CU080_RS28240 () | 3019937..3020194 | + | 258 | Protein_2815 | hypothetical protein | - |
| CU080_RS15525 () | 3020235..3020657 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| CU080_RS15530 () | 3020654..3021010 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| CU080_RS15535 () | 3021530..3023065 | - | 1536 | WP_001333339.1 | IS66 family transposase ISEc22 | Transposase |
| CU080_RS15540 () | 3023114..3023347 | - | 234 | WP_001341330.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CU080_RS15545 () | 3023395..3023493 | - | 99 | Protein_2820 | IS66 family transposase ISEc22 | Transposase |
| CU080_RS28245 () | 3023715..3024002 | + | 288 | Protein_2821 | hypothetical protein | - |
| CU080_RS15560 () | 3024771..3026084 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| CU080_RS15570 () | 3026521..3026853 | - | 333 | WP_001301033.1 | protein FlxA | - |
| CU080_RS15575 () | 3027056..3027361 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| CU080_RS15580 () | 3027386..3027625 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CU080_RS15585 () | 3027625..3027912 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CU080_RS15590 () | 3027984..3028139 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CU080_RS15595 () | 3028356..3028607 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| CU080_RS15600 () | 3028674..3028952 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| CU080_RS15605 () | 3028954..3030003 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| CU080_RS15610 () | 3030017..3030769 | + | 753 | WP_001047135.1 | antitermination protein | - |
| CU080_RS27945 () | 3031047..3031136 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| CU080_RS15615 () | 3031191..3031403 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| CU080_RS15620 () | 3031704..3031919 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| CU080_RS28510 () | 3032283..3032453 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| CU080_RS15625 () | 3032673..3032888 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| CU080_RS15630 () | 3032893..3033204 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| CU080_RS15635 () | 3033201..3033734 | + | 534 | WP_001092971.1 | lysozyme | - |
| CU080_RS15640 () | 3033731..3034228 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| CU080_RS15645 () | 3034591..3034803 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| CU080_RS15650 () | 3034814..3035002 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| CU080_RS27950 () | 3035005..3035070 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| CU080_RS27955 () | 3035150..3035305 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| CU080_RS15660 () | 3035477..3035650 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| CU080_RS15665 () | 3035802..3036212 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| CU080_RS15670 () | 3036270..3036503 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| CU080_RS15680 () | 3036892..3037437 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| CU080_RS28250 () | 3037412..3038461 | + | 1050 | Protein_2848 | phage terminase large subunit family protein | - |
| CU080_RS28255 () | 3038483..3039217 | + | 735 | Protein_2849 | tail fiber protein | - |
| CU080_RS15690 () | 3039217..3039792 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| CU080_RS15695 () | 3039890..3040480 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| CU080_RS15700 () | 3040797..3041030 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| CU080_RS27960 () | 3041099..3041212 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| CU080_RS15705 () | 3041733..3043100 | + | 1368 | Protein_2854 | MHS family MFS transporter | - |
| CU080_RS15710 () | 3043189..3044649 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| CU080_RS15715 () | 3044684..3044887 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CU080_RS15720 () | 3045064..3045750 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| CU080_RS15725 () | 3045839..3046585 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| CU080_RS15730 () | 3046722..3048767 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| CU080_RS15735 () | 3048811..3049329 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| CU080_RS15740 () | 3049605..3049997 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| CU080_RS15745 () | 3050252..3051142 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| CU080_RS28515 () | 3051257..3051361 | - | 105 | WP_211180496.1 | protein MgtT | - |
| CU080_RS15750 () | 3051361..3051456 | - | 96 | WP_000901367.1 | protein MgtS | - |
| CU080_RS15755 () | 3051583..3052770 | - | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| CU080_RS15760 () | 3052965..3053863 | + | 899 | Protein_2866 | O-acetylserine/cysteine exporter | - |
| CU080_RS15765 () | 3053894..3054112 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| CU080_RS15770 () | 3054144..3054527 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| CU080_RS15775 () | 3054547..3054981 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|