MGE detailed information
MGE type: Prophage MGE length: 46034 bp
Accession: NZ_CP024801 Location: 1981100..2027133 Organism: Escherichia coli strain AMA1167 Replicon: chromosome
Accession: NZ_CP024801 Location: 1981100..2027133 Organism: Escherichia coli strain AMA1167 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CUC42_RS10075 () | 1977518..1978489 | - | 972 | WP_000564745.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| CUC42_RS10080 () | 1978486..1979229 | - | 744 | WP_000019588.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| CUC42_RS10085 () | 1979270..1979665 | - | 396 | WP_001356287.1 | MAPEG family protein | - |
| CUC42_RS10090 () | 1979718..1980065 | - | 348 | WP_000599617.1 | DUF72 domain-containing protein | - |
| CUC42_RS10095 () | 1981100..1981624 | - | 525 | WP_000258747.1 | HNH endonuclease | - |
| CUC42_RS10100 () | 1983201..1983758 | + | 558 | WP_023147813.1 | hypothetical protein | - |
| CUC42_RS10105 () | 1983759..1984037 | + | 279 | WP_001753400.1 | hypothetical protein | - |
| CUC42_RS10110 () | 1984037..1984252 | + | 216 | WP_001681135.1 | hypothetical protein | - |
| CUC42_RS10115 () | 1984249..1984536 | + | 288 | WP_000805963.1 | HNH endonuclease | - |
| CUC42_RS10120 () | 1984692..1985015 | + | 324 | WP_001678977.1 | hypothetical protein | - |
| CUC42_RS10125 () | 1985554..1986264 | + | 711 | WP_001681134.1 | hypothetical protein | - |
| CUC42_RS10130 () | 1986273..1986581 | + | 309 | WP_001678975.1 | hypothetical protein | - |
| CUC42_RS10135 () | 1986607..1986810 | + | 204 | WP_001678974.1 | hypothetical protein | - |
| CUC42_RS10140 () | 1986969..1988702 | + | 1734 | Protein_1860 | tape measure protein | - |
| CUC42_RS10155 () | 1990033..1990353 | + | 321 | Protein_1862 | phage tail tape measure protein | - |
| CUC42_RS10160 () | 1990511..1991284 | + | 774 | WP_001678972.1 | hypothetical protein | - |
| CUC42_RS26095 () | 1991299..1991769 | - | 471 | Protein_1864 | recombinase family protein | - |
| CUC42_RS10170 () | 1991942..1993483 | + | 1542 | WP_001298859.1 | IS21-like element ISEc12 family transposase | - |
| CUC42_RS10175 () | 1993498..1994244 | + | 747 | WP_053906593.1 | IS21-like element ISEc12 family helper ATPase IstB | - |
| CUC42_RS10180 () | 1994329..1995408 | - | 1080 | Protein_1867 | recombinase family protein | - |
| CUC42_RS10185 () | 1995461..1995955 | - | 495 | WP_000639268.1 | DUF72 domain-containing protein | - |
| CUC42_RS10190 () | 1995952..1996518 | - | 567 | WP_000891618.1 | hydrolase | - |
| CUC42_RS10195 () | 1996828..1998600 | + | 1773 | WP_001258662.1 | aspartate--tRNA ligase | - |
| CUC42_RS10200 () | 1998718..1999170 | + | 453 | WP_001443602.1 | dihydroneopterin triphosphate diphosphatase | - |
| CUC42_RS10205 () | 1999199..1999939 | + | 741 | WP_000907248.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| CUC42_RS10210 () | 1999974..2000495 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| CUC42_RS10215 () | 2000497..2001099 | - | 603 | WP_001024930.1 | YebB family permuted papain-like enzyme | - |
| CUC42_RS10220 () | 2001170..2001235 | + | 66 | WP_001386853.1 | stress response small protein YobI | - |
| CUC42_RS10225 () | 2001374..2001985 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| CUC42_RS10230 () | 2001994..2003004 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| CUC42_RS10235 () | 2003151..2003936 | - | 786 | WP_000571479.1 | zinc ABC transporter permease subunit ZnuB | - |
| CUC42_RS10240 () | 2003933..2004688 | - | 756 | WP_000202996.1 | zinc ABC transporter ATP-binding protein ZnuC | - |
| CUC42_RS10245 () | 2004767..2005699 | + | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| CUC42_RS10250 () | 2005715..2007037 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| CUC42_RS10255 () | 2007157..2008128 | + | 972 | WP_000448381.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| CUC42_RS10260 () | 2008259..2009701 | - | 1443 | WP_000091176.1 | pyruvate kinase | - |
| CUC42_RS10265 () | 2009829..2010698 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| CUC42_RS10270 () | 2011036..2012511 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| CUC42_RS10275 () | 2012746..2014557 | + | 1812 | WP_060621242.1 | phosphogluconate dehydratase | - |
| CUC42_RS10280 () | 2014594..2015235 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| CUC42_RS10285 () | 2015291..2016469 | - | 1179 | WP_000173475.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| CUC42_RS10290 () | 2016603..2016893 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| CUC42_RS10295 () | 2016960..2017316 | + | 357 | WP_001295500.1 | protein YebF | - |
| CUC42_RS10300 () | 2017643..2018302 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| CUC42_RS10305 () | 2018511..2020571 | + | 2061 | WP_000936951.1 | oligopeptidase B | - |
| CUC42_RS10310 () | 2020568..2021230 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| CUC42_RS10315 () | 2021254..2021910 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| CUC42_RS10320 () | 2022012..2022242 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| CUC42_RS10325 () | 2022381..2022755 | + | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| CUC42_RS10330 () | 2022759..2023631 | + | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| CUC42_RS10335 () | 2023644..2023985 | + | 342 | WP_000976492.1 | YebY family protein | - |
| - () | 2024013..2024284 | - | 272 | - | - | Antitoxin Detail |
| - () | 2024143..2024246 | + | 104 | - | - | Toxin Detail |
| CUC42_RS10340 () | 2024381..2025037 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| CUC42_RS10345 () | 2025038..2025229 | - | 192 | WP_001296140.1 | YebW family protein | - |
| CUC42_RS10350 () | 2025334..2025570 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| CUC42_RS10355 () | 2025688..2027127 | - | 1440 | WP_000057023.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| CUC42_RS10360 () | 2027207..2029840 | - | 2634 | WP_001356288.1 | lipid-binding membrane homeostasis protein YebT | - |
| CUC42_RS10365 () | 2029809..2031092 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| CUC42_RS10370 () | 2031222..2031719 | + | 498 | WP_001373833.1 | L-methionine (R)-S-oxide reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|