MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 42174 bp
Accession: NZ_CP024780 Location: 1631731..1673904 Organism: Pectobacterium brasiliense strain BZA12 Replicon: chromosome
Accession: NZ_CP024780 Location: 1631731..1673904 Organism: Pectobacterium brasiliense strain BZA12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CTV95_RS07445 () | 1626999..1630130 | + | 3132 | WP_100017223.1 | beta-galactosidase | - |
| CTV95_RS07450 () | 1630266..1631528 | + | 1263 | WP_094430412.1 | MFS transporter | - |
| CTV95_RS07460 () | 1631908..1633179 | + | 1272 | WP_100017225.1 | Prophage integrase IntA ; Integrase | Integrase |
| CTV95_RS07465 () | 1633313..1633600 | - | 288 | WP_024105238.1 | helix-turn-helix domain-containing protein | - |
| CTV95_RS07470 () | 1633813..1634127 | - | 315 | WP_014699384.1 | helix-turn-helix domain-containing protein | - |
| CTV95_RS07475 () | 1634274..1634546 | + | 273 | WP_014699383.1 | helix-turn-helix domain-containing protein | - |
| CTV95_RS07480 () | 1634962..1635876 | + | 915 | WP_100017227.1 | hypothetical protein | - |
| CTV95_RS07485 () | 1636030..1636224 | + | 195 | WP_039359985.1 | AlpA family transcriptional regulator | - |
| CTV95_RS07490 () | 1636241..1636825 | + | 585 | WP_100017230.1 | DUF2857 domain-containing protein | - |
| CTV95_RS07495 () | 1636815..1637024 | + | 210 | WP_015730135.1 | TraR/DksA family transcriptional regulator | - |
| CTV95_RS07500 () | 1637352..1638236 | - | 885 | WP_100017232.1 | hypothetical protein | - |
| CTV95_RS22560 () | 1638664..1639449 | - | 786 | WP_198406574.1 | hypothetical protein | - |
| CTV95_RS07510 () | 1640192..1640413 | + | 222 | WP_100017234.1 | hypothetical protein | - |
| CTV95_RS07515 () | 1640495..1641160 | + | 666 | WP_100017236.1 | Type IV secretion system protein virB1 | VF |
| CTV95_RS07520 () | 1641157..1641438 | + | 282 | WP_100017238.1 | TrbC/VirB2 family protein | - |
| CTV95_RS07525 () | 1641448..1644195 | + | 2748 | WP_100017239.1 | Type IV secretion system protein virB4 | VF |
| CTV95_RS07530 () | 1644219..1644935 | + | 717 | WP_100017241.1 | type IV secretion system protein | - |
| CTV95_RS07535 () | 1644946..1645170 | + | 225 | WP_100017243.1 | EexN family lipoprotein | - |
| CTV95_RS07540 () | 1645182..1646222 | + | 1041 | WP_100017245.1 | type IV secretion system protein | - |
| CTV95_RS22565 () | 1646310..1646450 | + | 141 | WP_181847862.1 | hypothetical protein | - |
| CTV95_RS07545 () | 1646443..1647126 | + | 684 | WP_100017246.1 | Type IV secretion system protein PtlE | VF |
| CTV95_RS07550 () | 1647123..1648016 | + | 894 | WP_100017248.1 | P-type conjugative transfer protein VirB9 | - |
| CTV95_RS07555 () | 1648013..1649245 | + | 1233 | WP_100017250.1 | Type IV secretion system protein virB10 | VF |
| CTV95_RS07560 () | 1649235..1650251 | + | 1017 | WP_100017252.1 | Type IV secretion system protein VirB11 | VF |
| CTV95_RS07565 () | 1650294..1650596 | + | 303 | WP_100017254.1 | conjugal transfer protein | - |
| CTV95_RS07575 () | 1651317..1653179 | + | 1863 | WP_100017255.1 | type IV secretory system conjugative DNA transfer family protein | - |
| CTV95_RS07580 () | 1653188..1653934 | + | 747 | WP_100017257.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| CTV95_RS07585 () | 1654160..1654714 | + | 555 | WP_198406575.1 | hypothetical protein | - |
| CTV95_RS07590 () | 1654963..1655904 | - | 942 | WP_100017258.1 | hypothetical protein | - |
| CTV95_RS07595 () | 1656240..1656869 | - | 630 | WP_100018504.1 | hypothetical protein | - |
| CTV95_RS07600 () | 1657675..1658607 | + | 933 | WP_100017260.1 | hypothetical protein | - |
| CTV95_RS07605 () | 1658884..1661178 | + | 2295 | WP_100017262.1 | AAA family ATPase | - |
| CTV95_RS07610 () | 1661175..1663022 | + | 1848 | WP_100017264.1 | ATP-dependent helicase | - |
| CTV95_RS07615 () | 1663371..1664303 | - | 933 | WP_100017266.1 | hypothetical protein | - |
| CTV95_RS07620 () | 1664307..1665302 | - | 996 | WP_100017268.1 | nucleotidyltransferase | - |
| CTV95_RS07625 () | 1665452..1666351 | - | 900 | WP_100017269.1 | SMEK domain-containing protein | - |
| CTV95_RS07630 () | 1666467..1666763 | + | 297 | WP_100017270.1 | mobilization protein mobC | - |
| CTV95_RS07635 () | 1666797..1667111 | - | 315 | WP_100017271.1 | CcdB family protein | Toxin Detail |
| CTV95_RS07640 () | 1667114..1667350 | - | 237 | WP_100017272.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| CTV95_RS07645 () | 1667670..1668614 | - | 945 | WP_100017273.1 | DUF1738 domain-containing protein | - |
| CTV95_RS07650 () | 1669095..1669391 | + | 297 | WP_100017274.1 | DUF3892 domain-containing protein | - |
| CTV95_RS07655 () | 1669596..1670198 | - | 603 | WP_065684227.1 | IS91 family transposase ISMno24 | Transposase |
| CTV95_RS07660 () | 1670383..1671969 | - | 1587 | WP_157765229.1 | hypothetical protein | - |
| CTV95_RS07665 () | 1672045..1673340 | - | 1296 | WP_180745091.1 | hypothetical protein | VF |
| CTV95_RS07670 () | 1673955..1674263 | - | 309 | WP_100018506.1 | DUF1348 family protein | - |
| CTV95_RS07675 () | 1674416..1675054 | - | 639 | WP_100017276.1 | NAD(P)H-binding protein | - |
| CTV95_RS07680 () | 1675300..1676199 | + | 900 | WP_100017277.1 | LysR family transcriptional regulator | - |
| CTV95_RS07690 () | 1676599..1677513 | + | 915 | WP_100017278.1 | LysR family transcriptional regulator | - |
| CTV95_RS07695 () | 1677539..1678129 | - | 591 | WP_100017279.1 | flavin reductase family protein | - |
| CTV95_RS07700 () | 1678512..1678844 | + | 333 | WP_100017280.1 | DUF1971 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|