MGE detailed information
MGE type: Genomic_island MGE length: 49562 bp
Accession: NZ_CP024717 Location: 1260150..1309711 Organism: Escherichia coli strain LS4 Replicon: chromosome
Accession: NZ_CP024717 Location: 1260150..1309711 Organism: Escherichia coli strain LS4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CUB99_RS06900 () | 1256351..1256938 | + | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
| CUB99_RS06905 () | 1256952..1258424 | + | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| CUB99_RS06910 () | 1258438..1260108 | + | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| CUB99_RS06925 () | 1261193..1261755 | + | 563 | Protein_1274 | tyrosine-type DNA invertase IpbA | - |
| CUB99_RS06930 () | 1262085..1262879 | + | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| CUB99_RS06935 () | 1263033..1263794 | + | 762 | WP_001213045.1 | protein HyxA | - |
| CUB99_RS27925 () | 1263836..1264912 | + | 1077 | Protein_1277 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| CUB99_RS06945 () | 1264934..1266127 | + | 1194 | WP_072017408.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| CUB99_RS06950 () | 1266311..1266979 | + | 669 | WP_001005267.1 | membrane protein | - |
| CUB99_RS06965 () | 1267222..1267917 | - | 696 | WP_001295803.1 | lactate utilization protein C | - |
| CUB99_RS06970 () | 1267910..1269337 | - | 1428 | WP_001295802.1 | iron-sulfur cluster-binding protein | - |
| CUB99_RS06975 () | 1269348..1270067 | - | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| CUB99_RS06980 () | 1270593..1271447 | - | 855 | WP_001295801.1 | DNA-binding transcriptional regulator RclR | - |
| CUB99_RS06985 () | 1271674..1272999 | + | 1326 | WP_001046304.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| CUB99_RS06990 () | 1273108..1273344 | + | 237 | WP_000474088.1 | DUF1471 domain-containing protein | - |
| CUB99_RS06995 () | 1273356..1273949 | + | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| CUB99_RS07000 () | 1274109..1274978 | - | 870 | WP_001295799.1 | aldo/keto reductase | - |
| CUB99_RS07005 () | 1275226..1276083 | + | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| CUB99_RS07015 () | 1276208..1280455 | - | 4248 | WP_000092552.1 | Invasin | VF |
| CUB99_RS07020 () | 1281021..1281872 | + | 852 | WP_001174452.1 | aldo/keto reductase | - |
| CUB99_RS07025 () | 1281899..1282888 | + | 990 | WP_001172283.1 | aldo/keto reductase | - |
| CUB99_RS07030 () | 1282919..1283812 | - | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| CUB99_RS07035 () | 1284012..1284938 | - | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| CUB99_RS07040 () | 1285095..1286015 | + | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| CUB99_RS07045 () | 1286188..1287330 | + | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| CUB99_RS07050 () | 1287803..1287904 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| CUB99_RS07060 () | 1288269..1288532 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| CUB99_RS07065 () | 1288532..1288672 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| CUB99_RS07070 () | 1288742..1288932 | - | 191 | Protein_1299 | hypothetical protein | - |
| CUB99_RS07085 () | 1289756..1290298 | + | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| CUB99_RS07090 () | 1290373..1290960 | + | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| CUB99_RS07095 () | 1291017..1291685 | + | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| CUB99_RS07100 () | 1291711..1294236 | + | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| CUB99_RS07105 () | 1294226..1295869 | + | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| CUB99_RS07110 () | 1295838..1296548 | + | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| CUB99_RS07115 () | 1296855..1297184 | + | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| CUB99_RS07120 () | 1297196..1297359 | - | 164 | Protein_1307 | tail fiber assembly protein | - |
| CUB99_RS07125 () | 1297433..1298047 | - | 615 | WP_001019923.1 | YagU family protein | - |
| CUB99_RS07130 () | 1298262..1298447 | - | 186 | WP_000146240.1 | hypothetical protein | - |
| CUB99_RS28155 () | 1298496..1298654 | + | 159 | Protein_1310 | integrase | - |
| CUB99_RS07140 () | 1298861..1299229 | - | 369 | WP_001094398.1 | TA system toxin CbtA family protein | Toxin Detail |
| CUB99_RS07145 () | 1299250..1299555 | - | 306 | WP_077249034.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CUB99_RS07150 () | 1299659..1300303 | - | 645 | WP_000086755.1 | hypothetical protein | - |
| CUB99_RS07155 () | 1300322..1300543 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| CUB99_RS07160 () | 1300612..1301088 | - | 477 | WP_001186773.1 | RadC family protein | - |
| CUB99_RS07165 () | 1301104..1301589 | - | 486 | WP_000214317.1 | antirestriction protein | - |
| CUB99_RS07170 () | 1301680..1302498 | - | 819 | WP_001234702.1 | DUF945 domain-containing protein | - |
| CUB99_RS07185 () | 1302825..1305671 | - | 2847 | WP_099996239.1 | Ag43/Cah family autotransporter adhesin | - |
| CUB99_RS07190 () | 1306043..1306915 | - | 873 | WP_001069744.1 | GTPase family protein | - |
| CUB99_RS07195 () | 1307269..1308009 | + | 741 | WP_000960228.1 | DUF2971 domain-containing protein | - |
| CUB99_RS07200 () | 1308155..1308502 | - | 348 | WP_000569129.1 | GNAT family N-acetyltransferase | - |
| CUB99_RS07205 () | 1308593..1309711 | - | 1119 | WP_000375614.1 | hypothetical protein | - |
| CUB99_RS07215 () | 1310301..1311839 | - | 1539 | WP_099996240.1 | IS66 family transposase | - |
| CUB99_RS07220 () | 1311889..1312236 | - | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CUB99_RS07225 () | 1312233..1312622 | - | 390 | WP_001282151.1 | IS66 family insertion sequence hypothetical protein | - |
| CUB99_RS07230 () | 1313023..1314171 | - | 1149 | WP_185736824.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|