MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 30295 bp
Accession: NZ_CP024712 Location: 6038529..6068823 Organism: Pseudomonas syringae pv. actinidiae strain MAFF212063 Replicon: chromosome
Accession: NZ_CP024712 Location: 6038529..6068823 Organism: Pseudomonas syringae pv. actinidiae strain MAFF212063 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CT122_RS28585 () | 6034274..6034564 | + | 291 | WP_003422698.1 | hypothetical protein | - |
| CT122_RS28590 () | 6034843..6035217 | + | 375 | WP_003316229.1 | conjugal transfer transcriptional regulator TraJ | - |
| CT122_RS28595 () | 6035260..6036015 | + | 756 | WP_099978737.1 | P-type conjugative transfer protein TrbJ | - |
| CT122_RS28600 () | 6036219..6037604 | + | 1386 | WP_099978736.1 | P-type conjugative transfer protein TrbL | - |
| CT122_RS28610 () | 6038236..6038670 | + | 435 | Protein_5282 | site-specific integrase | - |
| CT122_RS28615 () | 6038820..6039350 | + | 531 | WP_099978733.1 | hypothetical protein | - |
| CT122_RS28620 () | 6039973..6041040 | - | 1068 | WP_100006013.1 | IS630-like element ISPsy32 family transposase | - |
| CT122_RS28625 () | 6041455..6041844 | + | 390 | WP_099979401.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CT122_RS28630 () | 6041895..6042206 | - | 312 | WP_003341209.1 | helix-turn-helix domain-containing protein | - |
| CT122_RS28635 () | 6043019..6043534 | - | 516 | WP_099979402.1 | hypothetical protein | - |
| CT122_RS28640 () | 6043571..6044050 | - | 480 | WP_157767091.1 | helix-turn-helix domain-containing protein | - |
| CT122_RS28650 () | 6044733..6045262 | + | 530 | Protein_5289 | integrase | - |
| CT122_RS28655 () | 6045462..6045698 | + | 237 | WP_099979404.1 | hypothetical protein | - |
| CT122_RS28660 () | 6045833..6046810 | - | 978 | WP_100006011.1 | IS5 family transposase | - |
| CT122_RS28665 () | 6046843..6047139 | + | 297 | WP_143525282.1 | hypothetical protein | - |
| CT122_RS28675 () | 6047857..6048570 | - | 714 | WP_099979096.1 | GNAT family N-acetyltransferase | - |
| CT122_RS28680 () | 6049101..6050171 | - | 1071 | WP_099979095.1 | UvrD-helicase domain-containing protein | - |
| CT122_RS28685 () | 6050164..6051765 | - | 1602 | WP_099979094.1 | AAA family ATPase | - |
| CT122_RS28690 () | 6052454..6053650 | - | 1197 | WP_099979093.1 | type II toxin-antitoxin system HipA family toxin | - |
| CT122_RS28695 () | 6053650..6053901 | - | 252 | WP_087675199.1 | helix-turn-helix domain-containing protein | - |
| CT122_RS28700 () | 6053921..6054217 | - | 297 | WP_099979092.1 | hypothetical protein | Toxin Detail |
| CT122_RS28705 () | 6054214..6054681 | - | 468 | WP_005737550.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| CT122_RS33325 () | 6054956..6055444 | + | 489 | WP_020307385.1 | hypothetical protein | - |
| CT122_RS28715 () | 6055498..6056091 | + | 594 | WP_020307386.1 | hypothetical protein | - |
| CT122_RS28720 () | 6056246..6056878 | - | 633 | WP_099979091.1 | 4'-phosphopantetheinyl transferase superfamily protein | - |
| CT122_RS28725 () | 6056875..6060909 | - | 4035 | WP_099979090.1 | non-ribosomal peptide synthetase | - |
| CT122_RS28730 () | 6061158..6061661 | - | 504 | WP_005737543.1 | GNAT family N-acetyltransferase | - |
| CT122_RS28735 () | 6061722..6063020 | - | 1299 | WP_099979089.1 | M20 family metallopeptidase | - |
| CT122_RS28740 () | 6063267..6064397 | + | 1131 | WP_019331549.1 | Fic family protein | - |
| CT122_RS28745 () | 6064461..6065096 | + | 636 | WP_019331548.1 | NERD domain-containing protein | - |
| CT122_RS28750 () | 6065100..6066326 | - | 1227 | WP_019331547.1 | type II toxin-antitoxin system HipA family toxin | - |
| CT122_RS28755 () | 6066326..6066649 | - | 324 | WP_003383374.1 | helix-turn-helix transcriptional regulator | - |
| CT122_RS28765 () | 6066959..6068035 | + | 1077 | WP_005763809.1 | FUSC family protein | - |
| CT122_RS28770 () | 6068047..6068508 | + | 462 | WP_003383369.1 | Lrp/AsnC family transcriptional regulator | - |
| CT122_RS28775 () | 6068660..6070339 | + | 1680 | WP_099979088.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| CT122_RS28780 () | 6070357..6071163 | + | 807 | WP_003383367.1 | carbon-nitrogen hydrolase family protein | - |
| CT122_RS28785 () | 6071336..6072619 | - | 1284 | WP_003373490.1 | group II intron reverse transcriptase/maturase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|