MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 48379 bp
Accession: NZ_CP024710 Location: 1870124..1918502 Organism: Dickeya solani strain IFB0223 Replicon: chromosome
Accession: NZ_CP024710 Location: 1870124..1918502 Organism: Dickeya solani strain IFB0223 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CTB91_RS08410 () | 1865410..1866084 | + | 675 | WP_022633092.1 | glutathione S-transferase family protein | - |
| CTB91_RS08415 () | 1866496..1867371 | - | 876 | WP_026594453.1 | alpha/beta hydrolase | - |
| CTB91_RS08420 () | 1867286..1868503 | - | 1218 | WP_022633094.1 | dienelactone hydrolase family protein | - |
| CTB91_RS21840 () | 1868905..1869192 | - | 288 | WP_146053333.1 | hypothetical protein | - |
| CTB91_RS08430 () | 1870655..1871719 | + | 1065 | WP_026594454.1 | DNA cytosine methyltransferase | - |
| CTB91_RS08435 () | 1871682..1874681 | + | 3000 | WP_080644163.1 | ATP-binding protein | - |
| CTB91_RS08440 () | 1874683..1876332 | + | 1650 | WP_022633097.1 | hypothetical protein | - |
| CTB91_RS08445 () | 1876693..1877094 | - | 402 | WP_023637748.1 | hypothetical protein | - |
| CTB91_RS21845 () | 1877158..1877451 | - | 294 | WP_146053334.1 | hypothetical protein | - |
| CTB91_RS08450 () | 1877842..1878786 | + | 945 | WP_022633099.1 | DUF1738 domain-containing protein | - |
| CTB91_RS08455 () | 1879107..1879343 | + | 237 | WP_022633100.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| CTB91_RS08460 () | 1879346..1879660 | + | 315 | WP_022633101.1 | CcdB family protein | Toxin Detail |
| CTB91_RS08465 () | 1879657..1879914 | - | 258 | WP_022633102.1 | hypothetical protein | - |
| CTB91_RS08470 () | 1880090..1881397 | - | 1308 | WP_022633103.1 | type II toxin-antitoxin system HipA family toxin | - |
| CTB91_RS08475 () | 1881397..1881804 | - | 408 | WP_071598628.1 | helix-turn-helix transcriptional regulator | - |
| CTB91_RS08485 () | 1882187..1882933 | - | 747 | WP_022633104.1 | hypothetical protein | - |
| CTB91_RS08490 () | 1882942..1884705 | - | 1764 | Protein_1634 | type IV secretory system conjugative DNA transfer family protein | - |
| CTB91_RS08500 () | 1885402..1885704 | - | 303 | WP_022633106.1 | KikA | - |
| CTB91_RS08505 () | 1885745..1886761 | - | 1017 | WP_022633107.1 | Type IV secretion system protein VirB11 | VF |
| CTB91_RS08510 () | 1886751..1887959 | - | 1209 | Protein_1637 | Type IV secretion system protein PtlG | VF |
| CTB91_RS08515 () | 1887956..1888846 | - | 891 | WP_022633110.1 | P-type conjugative transfer protein VirB9 | - |
| CTB91_RS08520 () | 1888846..1889529 | - | 684 | WP_022633111.1 | Type IV secretion system protein PtlE | VF |
| CTB91_RS08525 () | 1889750..1890778 | - | 1029 | WP_022633112.1 | type IV secretion system protein | - |
| CTB91_RS08530 () | 1890790..1891014 | - | 225 | WP_022633113.1 | EexN family lipoprotein | - |
| CTB91_RS08535 () | 1891026..1891742 | - | 717 | WP_022633114.1 | type IV secretion system protein | - |
| CTB91_RS08540 () | 1891768..1894515 | - | 2748 | WP_022633115.1 | Type IV secretion system protein virB4 | VF |
| CTB91_RS08545 () | 1894525..1894800 | - | 276 | WP_012769221.1 | hypothetical protein | VF |
| CTB91_RS08550 () | 1894820..1895467 | - | 648 | WP_022633116.1 | Type IV secretion system protein virB1 | VF |
| CTB91_RS08555 () | 1895537..1895770 | - | 234 | WP_022633117.1 | hypothetical protein | - |
| CTB91_RS08560 () | 1896336..1896851 | - | 516 | WP_022633118.1 | NAD(P)H-dependent oxidoreductase | - |
| CTB91_RS08565 () | 1896871..1897836 | - | 966 | WP_022633119.1 | aldo/keto reductase | - |
| CTB91_RS08570 () | 1897896..1898762 | - | 867 | WP_022633120.1 | SMP-30/gluconolactonase/LRE family protein | - |
| CTB91_RS08575 () | 1898845..1899318 | - | 474 | WP_022633121.1 | DMT family transporter | - |
| CTB91_RS08580 () | 1899330..1900727 | - | 1398 | WP_022633122.1 | amidohydrolase family protein | - |
| CTB91_RS08585 () | 1900859..1901743 | + | 885 | WP_022633123.1 | HTH-type transcriptional regulator PgrR | VF |
| CTB91_RS08590 () | 1902007..1902216 | - | 210 | WP_022633124.1 | TraR/DksA family transcriptional regulator | - |
| CTB91_RS08595 () | 1902206..1902790 | - | 585 | WP_022633125.1 | DUF2857 domain-containing protein | - |
| CTB91_RS08600 () | 1902807..1903001 | - | 195 | WP_022633126.1 | AlpA family transcriptional regulator | - |
| CTB91_RS08605 () | 1903677..1903934 | - | 258 | WP_012769229.1 | helix-turn-helix domain-containing protein | - |
| CTB91_RS08610 () | 1904048..1904326 | - | 279 | WP_012884168.1 | HTH-type transcriptional regulator Xre | VF |
| CTB91_RS08615 () | 1904460..1904747 | + | 288 | WP_022633127.1 | helix-turn-helix domain-containing protein | - |
| CTB91_RS08620 () | 1905025..1905270 | - | 246 | WP_013318575.1 | helix-turn-helix transcriptional regulator | - |
| CTB91_RS08625 () | 1905954..1906472 | + | 519 | WP_022633128.1 | Major exported protein | VF |
| CTB91_RS08630 () | 1906585..1908447 | + | 1863 | WP_022633129.1 | Actin cross-linking toxin VgrG1 | VF |
| CTB91_RS08635 () | 1908525..1908965 | + | 441 | WP_023637755.1 | DUF1795 domain-containing protein | - |
| CTB91_RS08640 () | 1908983..1912813 | + | 3831 | Protein_1663 | PAAR domain-containing protein | - |
| CTB91_RS08645 () | 1913182..1914027 | + | 846 | WP_023637756.1 | hypothetical protein | - |
| CTB91_RS21850 () | 1914326..1914472 | + | 147 | WP_155246175.1 | hypothetical protein | - |
| CTB91_RS08655 () | 1914634..1915560 | - | 927 | WP_022633133.1 | hypothetical protein | - |
| CTB91_RS08665 () | 1916576..1916887 | + | 312 | WP_022633134.1 | DUF736 domain-containing protein | - |
| CTB91_RS08670 () | 1917043..1918325 | - | 1283 | Protein_1668 | Prophage integrase IntA ; Integrase | Integrase |
| CTB91_RS08680 () | 1918672..1919463 | - | 792 | WP_022633137.1 | DgsA anti-repressor MtfA | - |
| CTB91_RS08690 () | 1920326..1921477 | - | 1152 | WP_022633138.1 | type I restriction enzyme HsdR N-terminal domain-containing protein | - |
| CTB91_RS08695 () | 1921511..1921900 | - | 390 | WP_023637758.1 | helix-turn-helix domain-containing protein | - |
| CTB91_RS08700 () | 1922328..1922495 | + | 168 | WP_022633139.1 | YqaE/Pmp3 family membrane protein | - |
| CTB91_RS08705 () | 1922568..1923122 | - | 555 | WP_022633140.1 | flavodoxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|