MGE detailed information
MGE type: Conjugative plasmid MGE length: 134386 bp
Accession: NZ_CP024681 Location: 1..134386 Organism: Citrobacter freundii strain UMH14 Replicon: plasmid pUMH14_1
Accession: NZ_CP024681 Location: 1..134386 Organism: Citrobacter freundii strain UMH14 Replicon: plasmid pUMH14_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CUC46_RS23720 () | 358..720 | - | 363 | WP_121572281.1 | hypothetical protein | - |
| CUC46_RS23725 () | 809..1120 | - | 312 | WP_121572282.1 | hypothetical protein | - |
| CUC46_RS23735 () | 1692..2630 | + | 939 | WP_121572283.1 | hypothetical protein | - |
| CUC46_RS23740 () | 2678..3703 | - | 1026 | WP_121572284.1 | hypothetical protein | - |
| CUC46_RS23745 () | 3977..4207 | + | 231 | WP_121572285.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CUC46_RS23750 () | 4204..4620 | + | 417 | WP_121572286.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CUC46_RS23755 () | 4766..5836 | - | 1071 | WP_141227224.1 | hypothetical protein | - |
| CUC46_RS23760 () | 6627..7256 | - | 630 | WP_063136851.1 | DUF1349 domain-containing protein | - |
| CUC46_RS23765 () | 7338..8519 | - | 1182 | WP_121572288.1 | MFS transporter | - |
| CUC46_RS23770 () | 8553..9311 | - | 759 | WP_047732337.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| CUC46_RS23775 () | 9687..10910 | + | 1224 | WP_201506621.1 | MFS transporter | - |
| CUC46_RS23780 () | 11397..12350 | + | 954 | WP_161556283.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| CUC46_RS23785 () | 12366..12959 | + | 594 | WP_121572290.1 | hypothetical protein | - |
| CUC46_RS25105 () | 12976..13512 | - | 537 | WP_121572291.1 | hypothetical protein | - |
| CUC46_RS23795 () | 13572..13761 | - | 190 | Protein_15 | hypothetical protein | - |
| CUC46_RS23800 () | 14001..15503 | + | 1503 | WP_121572292.1 | IS21 family transposase ISAs29 | Transposase |
| CUC46_RS23805 () | 15520..16263 | + | 744 | Protein_17 | IS21 family transposase ISAs29 | Transposase |
| CUC46_RS23810 () | 16362..16568 | + | 207 | WP_047732331.1 | hypothetical protein | - |
| CUC46_RS23815 () | 16721..16942 | - | 222 | Protein_19 | transposase | - |
| CUC46_RS23820 () | 17103..17939 | - | 837 | WP_121572293.1 | PRD domain-containing protein | - |
| CUC46_RS23825 () | 17961..19424 | - | 1464 | WP_047732321.1 | family 1 glycosylhydrolase | - |
| CUC46_RS23830 () | 19424..21235 | - | 1812 | WP_047732316.1 | beta-glucoside-specific PTS transporter subunit IIABC | - |
| CUC46_RS23835 () | 21689..21970 | - | 282 | WP_201506619.1 | hypothetical protein | - |
| CUC46_RS23840 () | 22024..22323 | - | 300 | WP_053065086.1 | IS3 family transposase IS911 | Transposase |
| CUC46_RS23845 () | 22370..22936 | + | 567 | Protein_25 | transposase zinc-binding domain-containing protein | - |
| CUC46_RS23850 () | 22890..23897 | + | 1008 | WP_201750590.1 | hypothetical protein | - |
| CUC46_RS23855 () | 24155..26197 | - | 2043 | WP_121572294.1 | hypothetical protein | - |
| CUC46_RS23865 () | 26909..27166 | + | 258 | WP_077258044.1 | DUF2767 family protein | - |
| CUC46_RS23870 () | 27419..27580 | - | 162 | WP_047732281.1 | type I toxin-antitoxin system Hok family toxin | - |
| CUC46_RS23875 () | 28495..29931 | + | 1437 | WP_121572296.1 | aldehyde dehydrogenase family protein | - |
| CUC46_RS23880 () | 30035..30772 | - | 738 | Protein_31 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| CUC46_RS23890 () | 31271..31906 | + | 636 | WP_047732266.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CUC46_RS23895 () | 31934..32770 | - | 837 | WP_047732446.1 | S-formylglutathione hydrolase | - |
| CUC46_RS23900 () | 32836..33234 | - | 399 | WP_008813494.1 | VOC family protein | - |
| CUC46_RS23905 () | 33276..34385 | - | 1110 | WP_121572298.1 | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | - |
| CUC46_RS23910 () | 34420..34695 | - | 276 | WP_121572299.1 | formaldehyde-responsive transcriptional repressor FrmR | - |
| CUC46_RS25025 () | 34962..35111 | + | 150 | WP_161556284.1 | IS3 family transposase ISSod2 | Transposase |
| CUC46_RS23915 () | 35420..35956 | - | 537 | WP_121572300.1 | ferredoxin-type protein NapF | - |
| CUC46_RS23920 () | 35953..36549 | - | 597 | WP_121572301.1 | molecular chaperone | - |
| CUC46_RS23925 () | 36586..37359 | - | 774 | WP_121572302.1 | dimethyl sulfoxide reductase anchor subunit | - |
| CUC46_RS23930 () | 37352..37978 | - | 627 | WP_121572303.1 | dimethylsulfoxide reductase subunit B | - |
| CUC46_RS23935 () | 37992..40424 | - | 2433 | WP_121572304.1 | molybdopterin-dependent oxidoreductase | - |
| CUC46_RS23940 () | 40499..41554 | - | 1056 | WP_121572305.1 | IS630 family transposase ISPlu8 | Transposase |
| CUC46_RS23945 () | 41789..42547 | + | 759 | WP_121572306.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| CUC46_RS23950 () | 42627..43799 | + | 1173 | WP_121572351.1 | MFS transporter | - |
| CUC46_RS23955 () | 43964..44374 | + | 411 | Protein_46 | hypothetical protein | - |
| CUC46_RS23960 () | 44719..45567 | + | 849 | WP_121572352.1 | MFS transporter | - |
| CUC46_RS23965 () | 45688..46308 | + | 621 | WP_121572307.1 | DUF1349 domain-containing protein | - |
| CUC46_RS23970 () | 46422..47540 | + | 1119 | WP_121572308.1 | NADH:flavin oxidoreductase/NADH oxidase | - |
| CUC46_RS23975 () | 48110..48298 | - | 189 | WP_121572309.1 | hypothetical protein | - |
| CUC46_RS23985 () | 48493..49188 | + | 696 | WP_095533166.1 | DNA-binding protein | - |
| CUC46_RS23990 () | 49497..49991 | + | 495 | WP_075552852.1 | hypothetical protein | - |
| CUC46_RS23995 () | 50065..51198 | - | 1134 | WP_048227679.1 | DUF3800 domain-containing protein | - |
| CUC46_RS24000 () | 51461..52135 | + | 675 | WP_079935183.1 | hypothetical protein | - |
| CUC46_RS24005 () | 52520..52774 | + | 255 | WP_079935184.1 | hypothetical protein | - |
| CUC46_RS24010 () | 52771..54030 | + | 1260 | WP_121572311.1 | hypothetical protein | - |
| CUC46_RS24015 () | 54027..54707 | + | 681 | WP_121572312.1 | hypothetical protein | - |
| CUC46_RS24020 () | 54704..55177 | + | 474 | WP_048227683.1 | thermonuclease family protein | - |
| CUC46_RS24025 () | 55502..55771 | + | 270 | WP_079935185.1 | hypothetical protein | - |
| CUC46_RS24030 () | 57234..58100 | - | 867 | WP_048227619.1 | hypothetical protein | - |
| CUC46_RS24035 () | 58413..58613 | - | 201 | WP_048227620.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CUC46_RS24040 () | 58884..59546 | + | 663 | WP_048227621.1 | PAS domain-containing protein | - |
| CUC46_RS24045 () | 59998..60258 | + | 261 | WP_048227622.1 | sigma-70 family RNA polymerase sigma factor | - |
| CUC46_RS24050 () | 60542..61051 | + | 510 | WP_048227623.1 | transcription termination factor NusG | - |
| CUC46_RS24055 () | 61291..61971 | + | 681 | WP_048227624.1 | hypothetical protein | - |
| CUC46_RS24060 () | 62027..63118 | + | 1092 | WP_048227686.1 | hypothetical protein | VF |
| CUC46_RS24065 () | 63118..63555 | + | 438 | WP_121572353.1 | hypothetical protein | VF |
| CUC46_RS24070 () | 63570..65246 | + | 1677 | WP_048227625.1 | Outer membrane lipoprotein BfpB | VF |
| CUC46_RS24075 () | 65248..66552 | + | 1305 | WP_048227626.1 | hypothetical protein | VF |
| CUC46_RS24080 () | 66536..67036 | + | 501 | WP_053069306.1 | hypothetical protein | VF |
| CUC46_RS24085 () | 67039..68598 | + | 1560 | WP_048227627.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CUC46_RS24090 () | 68591..69685 | + | 1095 | WP_040231337.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CUC46_RS24095 () | 69699..70313 | + | 615 | WP_052463753.1 | hypothetical protein | VF |
| CUC46_RS24100 () | 70362..70880 | + | 519 | WP_171846128.1 | hypothetical protein | VF |
| CUC46_RS24105 () | 70865..71539 | + | 675 | WP_121572313.1 | prepilin peptidase | - |
| CUC46_RS24110 () | 71536..72822 | + | 1287 | WP_058687259.1 | hypothetical protein | VF |
| CUC46_RS24115 () | 72877..73383 | + | 507 | WP_077223963.1 | Galactoside O-acetyltransferase | VF |
| CUC46_RS24120 () | 73841..74974 | + | 1134 | WP_095533169.1 | IS91 family transposase ISShvi3 | Transposase |
| CUC46_RS24960 () | 74994..75470 | + | 477 | WP_145996426.1 | hypothetical protein | - |
| CUC46_RS24125 () | 75616..76452 | + | 837 | WP_048227630.1 | hypothetical protein | - |
| CUC46_RS24130 () | 76555..77763 | + | 1209 | WP_099530103.1 | conjugal transfer protein TraF | - |
| CUC46_RS24135 () | 77896..78369 | + | 474 | WP_121572314.1 | DotD/TraH family lipoprotein | - |
| CUC46_RS24140 () | 78366..79172 | + | 807 | WP_121572315.1 | hypothetical protein | VF |
| CUC46_RS24145 () | 79184..80344 | + | 1161 | WP_048227634.1 | putative protein YggR | VF |
| CUC46_RS24150 () | 80341..80628 | + | 288 | WP_048227635.1 | hypothetical protein | - |
| CUC46_RS24155 () | 80700..85199 | + | 4500 | WP_121572316.1 | hypothetical protein | - |
| CUC46_RS24160 () | 85229..85567 | + | 339 | WP_095533170.1 | conjugal transfer protein | - |
| CUC46_RS24165 () | 85573..86274 | + | 702 | WP_048227637.1 | hypothetical protein | VF |
| CUC46_RS24170 () | 86285..87268 | + | 984 | WP_048227638.1 | hypothetical protein | VF |
| CUC46_RS24175 () | 87268..88584 | + | 1317 | WP_069325141.1 | conjugal transfer protein TraO | - |
| CUC46_RS24180 () | 88565..89338 | + | 774 | WP_129719564.1 | conjugal transfer protein TraP | - |
| CUC46_RS24185 () | 89338..89862 | + | 525 | WP_048227641.1 | conjugal transfer protein TraQ | - |
| CUC46_RS24190 () | 89897..90301 | + | 405 | WP_048227642.1 | hypothetical protein | - |
| CUC46_RS24195 () | 90347..91129 | + | 783 | Protein_94 | conjugal transfer protein TraT | - |
| CUC46_RS24200 () | 91288..94341 | + | 3054 | WP_121572317.1 | ATP-binding protein | - |
| CUC46_RS25030 () | 94338..94910 | + | 573 | WP_161556285.1 | conjugal transfer protein TraV | - |
| CUC46_RS24205 () | 94923..96125 | + | 1203 | WP_048227644.1 | conjugal transfer protein TraW | - |
| CUC46_RS24210 () | 96122..96664 | + | 543 | WP_094935555.1 | conjugal transfer protein TraX | - |
| CUC46_RS24215 () | 96721..98883 | + | 2163 | WP_121572318.1 | DotA/TraY family protein | - |
| CUC46_RS24220 () | 98945..99577 | + | 633 | WP_053069310.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CUC46_RS24225 () | 99880..101088 | + | 1209 | WP_053389036.1 | hypothetical protein | - |
| CUC46_RS24230 () | 101141..102340 | + | 1200 | WP_053389035.1 | thioredoxin fold domain-containing protein | - |
| CUC46_RS24235 () | 102396..103526 | - | 1131 | WP_053389034.1 | IS200-IS605 family transposase ISEc42 | Transposase |
| CUC46_RS24240 () | 103635..105935 | + | 2301 | WP_053389033.1 | TraM recognition domain-containing protein | - |
| CUC46_RS24245 () | 106008..106277 | + | 270 | WP_048227650.1 | hypothetical protein | - |
| CUC46_RS24250 () | 106308..107084 | - | 777 | WP_121572319.1 | hypothetical protein | - |
| CUC46_RS24255 () | 107210..108361 | - | 1152 | WP_048227653.1 | hypothetical protein | VF |
| CUC46_RS24260 () | 108457..111156 | - | 2700 | WP_048227654.1 | Protein TraI | Relaxase |
| CUC46_RS24265 () | 111178..111513 | - | 336 | WP_048227655.1 | nikA protein | - |
| CUC46_RS24270 () | 111765..112016 | + | 252 | Protein_110 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| CUC46_RS24275 () | 112213..113046 | - | 834 | WP_121572320.1 | DUF945 domain-containing protein | - |
| CUC46_RS24280 () | 113454..114023 | - | 570 | WP_153071036.1 | hypothetical protein | - |
| CUC46_RS24285 () | 114083..114319 | - | 237 | WP_121572322.1 | hypothetical protein | - |
| CUC46_RS24295 () | 115085..115342 | + | 258 | WP_121572324.1 | helix-turn-helix transcriptional regulator | - |
| CUC46_RS24300 () | 115339..115641 | - | 303 | WP_121572325.1 | DUF957 domain-containing protein | - |
| CUC46_RS24305 () | 115686..116174 | - | 489 | WP_121572354.1 | antirestriction protein | - |
| CUC46_RS24310 () | 116254..117072 | - | 819 | WP_121572326.1 | type I restriction-modification system subunit M | - |
| CUC46_RS24315 () | 117115..117471 | - | 357 | WP_121572327.1 | hypothetical protein | - |
| CUC46_RS24325 () | 118376..118534 | - | 159 | WP_121572329.1 | type I toxin-antitoxin system Hok family toxin | - |
| CUC46_RS24330 () | 118773..119009 | - | 237 | WP_121572330.1 | hypothetical protein | - |
| CUC46_RS24335 () | 119006..119737 | - | 732 | WP_121572331.1 | plasmid SOS inhibition protein A | - |
| CUC46_RS24340 () | 119734..120159 | - | 426 | WP_121572332.1 | conjugation system SOS inhibitor PsiB | - |
| CUC46_RS24345 () | 120203..122185 | - | 1983 | WP_121572333.1 | ParB/RepB/Spo0J family partition protein | - |
| CUC46_RS24350 () | 122253..122585 | - | 333 | WP_121572334.1 | DUF905 family protein | - |
| CUC46_RS25035 () | 123104..123268 | - | 165 | WP_161556286.1 | hypothetical protein | - |
| CUC46_RS24360 () | 123419..123607 | - | 189 | WP_121572336.1 | hypothetical protein | - |
| CUC46_RS24365 () | 123650..124159 | - | 510 | WP_121572337.1 | antirestriction protein ArdA | - |
| CUC46_RS24370 () | 124567..125346 | - | 780 | WP_121572338.1 | hypothetical protein | - |
| CUC46_RS24375 () | 125700..126038 | - | 339 | WP_121572339.1 | hypothetical protein | - |
| CUC46_RS24380 () | 126038..126499 | - | 462 | WP_121572340.1 | hypothetical protein | - |
| CUC46_RS24385 () | 126854..127597 | - | 744 | WP_121572341.1 | hypothetical protein | - |
| CUC46_RS24390 () | 128053..128481 | + | 429 | WP_121572355.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CUC46_RS24395 () | 128481..129749 | + | 1269 | WP_121572342.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| CUC46_RS24400 () | 129753..130142 | - | 390 | WP_121572343.1 | plasmid partitioning/stability family protein | - |
| CUC46_RS24405 () | 130147..131118 | - | 972 | WP_121572344.1 | plasmid segregation protein parM | - |
| CUC46_RS24410 () | 131362..132000 | + | 639 | WP_121572345.1 | AAA family ATPase | - |
| CUC46_RS24420 () | 132518..132853 | + | 336 | WP_121572346.1 | hypothetical protein | - |
| CUC46_RS24425 () | 133100..133456 | - | 357 | WP_121572347.1 | hypothetical protein | - |
| CUC46_RS24430 () | 133595..134284 | - | 690 | Protein_139 | phage integrase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|