MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 112357 bp
Accession: NZ_CP024677 Location: 3519137..3631493 Organism: Citrobacter freundii strain UMH16 Replicon: chromosome
Accession: NZ_CP024677 Location: 3519137..3631493 Organism: Citrobacter freundii strain UMH16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CUC48_RS17450 () | 3514385..3515641 | + | 1257 | WP_003027130.1 | nucleoside permease | - |
| CUC48_RS17455 () | 3515694..3517829 | - | 2136 | WP_057102132.1 | ornithine decarboxylase | - |
| CUC48_RS17460 () | 3518298..3519005 | + | 708 | WP_003846348.1 | DUF554 domain-containing protein | - |
| CUC48_RS17470 () | 3519470..3520435 | - | 966 | WP_013095253.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CUC48_RS17475 () | 3520470..3522050 | - | 1581 | WP_086538577.1 | TraI domain-containing protein | - |
| CUC48_RS17480 () | 3522255..3522815 | + | 561 | WP_013095250.1 | hypothetical protein | - |
| CUC48_RS17485 () | 3523128..3523979 | + | 852 | WP_099725667.1 | hypothetical protein | - |
| CUC48_RS17490 () | 3524065..3525282 | + | 1218 | WP_044158948.1 | conjugal transfer protein TraF | - |
| CUC48_RS17495 () | 3525355..3525891 | + | 537 | WP_013095246.1 | hypothetical protein | - |
| CUC48_RS17500 () | 3525907..3526560 | + | 654 | WP_013095245.1 | hypothetical protein | - |
| CUC48_RS17505 () | 3526557..3527036 | + | 480 | WP_013095244.1 | macro domain-containing protein | - |
| CUC48_RS26110 () | 3527033..3527773 | + | 741 | WP_070082762.1 | hypothetical protein | - |
| CUC48_RS17510 () | 3527743..3528282 | + | 540 | WP_047028315.1 | HNH endonuclease | - |
| CUC48_RS26335 () | 3528458..3528871 | + | 414 | WP_054442362.1 | hypothetical protein | - |
| CUC48_RS17520 () | 3528919..3529290 | - | 372 | Protein_3336 | SAM-dependent DNA methyltransferase | - |
| CUC48_RS17525 () | 3529393..3530532 | + | 1140 | WP_058799369.1 | Tyrosine recombinase XerH ; Integrase | Integrase |
| CUC48_RS26115 () | 3530536..3532194 | + | 1659 | WP_072209264.1 | hypothetical protein | - |
| CUC48_RS17530 () | 3532191..3534029 | + | 1839 | WP_074173832.1 | hypothetical protein ; Integrase | Integrase |
| CUC48_RS26340 () | 3534013..3534369 | + | 357 | WP_058799371.1 | hypothetical protein | - |
| CUC48_RS17540 () | 3534386..3535111 | - | 726 | WP_058799372.1 | CBASS effector endonuclease NucC | - |
| CUC48_RS17545 () | 3535202..3536134 | - | 933 | WP_058799373.1 | AAA family ATPase | - |
| CUC48_RS17550 () | 3536131..3536649 | - | 519 | WP_038992388.1 | hypothetical protein | - |
| CUC48_RS17555 () | 3536657..3537622 | - | 966 | WP_057393355.1 | nucleotidyltransferase | - |
| CUC48_RS17560 () | 3537805..3538128 | + | 324 | WP_001515173.1 | helix-turn-helix domain-containing protein | - |
| CUC48_RS17565 () | 3538131..3538997 | + | 867 | WP_058799374.1 | ImmA/IrrE family metallo-endopeptidase | - |
| CUC48_RS17570 () | 3539116..3539439 | - | 324 | Protein_3347 | SAM-dependent DNA methyltransferase | - |
| CUC48_RS17575 () | 3539566..3540516 | - | 951 | WP_013095237.1 | DUF1281 domain-containing protein | - |
| CUC48_RS17580 () | 3540613..3541596 | - | 984 | WP_013095236.1 | DUF1738 domain-containing protein | - |
| CUC48_RS17585 () | 3541669..3542280 | - | 612 | WP_013095235.1 | hypothetical protein | - |
| CUC48_RS17590 () | 3542390..3542827 | - | 438 | WP_099725666.1 | hypothetical protein | - |
| CUC48_RS17595 () | 3542911..3543207 | - | 297 | WP_013095233.1 | hypothetical protein | - |
| CUC48_RS17600 () | 3543331..3543693 | - | 363 | WP_013095232.1 | hypothetical protein | - |
| CUC48_RS17605 () | 3543776..3544165 | - | 390 | WP_013095231.1 | hypothetical protein | - |
| CUC48_RS17610 () | 3544452..3544898 | - | 447 | WP_099725561.1 | hypothetical protein | - |
| CUC48_RS17615 () | 3544972..3545856 | - | 885 | WP_013095229.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CUC48_RS17625 () | 3548779..3549243 | + | 465 | WP_077270200.1 | hypothetical protein | - |
| CUC48_RS17630 () | 3549498..3550184 | + | 687 | WP_035943492.1 | 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | - |
| CUC48_RS17635 () | 3550509..3552017 | - | 1509 | WP_013095225.1 | DNA mismatch repair protein MutS | - |
| CUC48_RS17640 () | 3552014..3553552 | - | 1539 | WP_044158959.1 | DNA mismatch repair protein MutS | - |
| CUC48_RS17645 () | 3553815..3554234 | - | 420 | WP_013095222.1 | universal stress protein | - |
| CUC48_RS17650 () | 3554604..3554993 | - | 390 | WP_044158961.1 | fluoride efflux transporter CrcB | - |
| CUC48_RS17655 () | 3555075..3556364 | - | 1290 | WP_013095220.1 | phosphopyruvate hydratase | - |
| CUC48_RS17660 () | 3556381..3556806 | - | 426 | WP_013095219.1 | universal stress protein | - |
| CUC48_RS17665 () | 3556803..3557711 | - | 909 | WP_013095218.1 | DHH family phosphoesterase | - |
| CUC48_RS17670 () | 3558159..3559316 | + | 1158 | WP_013095215.1 | Na+/H+ antiporter NhaA | - |
| CUC48_RS17675 () | 3559377..3561035 | - | 1659 | WP_121581733.1 | FAD-dependent oxidoreductase | - |
| CUC48_RS17680 () | 3561197..3561547 | + | 351 | WP_013095213.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| CUC48_RS17685 () | 3561849..3562325 | - | 477 | WP_013095212.1 | hypothetical protein | VF |
| CUC48_RS17690 () | 3562439..3562876 | - | 438 | WP_044158965.1 | PaaI family thioesterase | - |
| CUC48_RS17695 () | 3563040..3563501 | - | 462 | WP_013095208.1 | hypothetical protein | - |
| CUC48_RS17700 () | 3563476..3563796 | - | 321 | WP_001137910.1 | DUF134 domain-containing protein | - |
| CUC48_RS17705 () | 3564082..3564309 | - | 228 | WP_007372650.1 | hypothetical protein | - |
| CUC48_RS17710 () | 3565065..3566540 | + | 1476 | WP_044159550.1 | SulP family inorganic anion transporter | - |
| CUC48_RS17715 () | 3566558..3567385 | + | 828 | WP_007372648.1 | universal stress protein | - |
| CUC48_RS17720 () | 3567467..3567670 | + | 204 | WP_013095206.1 | hypothetical protein | - |
| CUC48_RS17725 () | 3567781..3568011 | - | 231 | WP_013095205.1 | thioredoxin family protein | - |
| CUC48_RS17730 () | 3568025..3569026 | - | 1002 | WP_013095204.1 | permease | - |
| CUC48_RS17735 () | 3569231..3569725 | - | 495 | WP_198406523.1 | sigma-70 family RNA polymerase sigma factor | - |
| CUC48_RS17740 () | 3569897..3570079 | - | 183 | WP_013095200.1 | hypothetical protein | - |
| CUC48_RS17745 () | 3570199..3570552 | + | 354 | WP_013095199.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| CUC48_RS17750 () | 3570609..3571088 | + | 480 | WP_013095198.1 | arsenate reductase ArsC | - |
| CUC48_RS17755 () | 3571111..3571476 | + | 366 | WP_044158970.1 | arsenite efflux transporter metallochaperone ArsD | - |
| CUC48_RS17760 () | 3571500..3573266 | + | 1767 | WP_013095196.1 | IS21 family transposase ISMex8 | Transposase |
| CUC48_RS17765 () | 3573307..3574596 | + | 1290 | WP_013095195.1 | arsenical efflux pump membrane protein ArsB | - |
| CUC48_RS17770 () | 3574654..3575082 | + | 429 | WP_007372636.1 | glutaredoxin-dependent arsenate reductase | - |
| CUC48_RS17775 () | 3575155..3575664 | + | 510 | WP_007372635.1 | arsenate reductase ArsC | - |
| CUC48_RS17780 () | 3575804..3576301 | + | 498 | WP_047028317.1 | tyrosine-protein phosphatase | - |
| CUC48_RS17785 () | 3576600..3577322 | + | 723 | WP_013095191.1 | arsenical resistance protein ArsH | - |
| CUC48_RS17790 () | 3577405..3577935 | - | 531 | WP_013095190.1 | GNAT family N-acetyltransferase | - |
| CUC48_RS17800 () | 3578266..3578481 | - | 216 | WP_013095188.1 | hypothetical protein | - |
| CUC48_RS17805 () | 3578778..3581444 | + | 2667 | WP_013095186.1 | DNA repair ATPase | - |
| CUC48_RS17810 () | 3581639..3581929 | + | 291 | WP_013095185.1 | hypothetical protein | - |
| CUC48_RS17815 () | 3581973..3583517 | - | 1545 | WP_013095184.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| CUC48_RS17820 () | 3583531..3583869 | - | 339 | WP_013095183.1 | hypothetical protein | - |
| CUC48_RS17825 () | 3583871..3585295 | - | 1425 | WP_013095182.1 | integrating conjugative element protein | - |
| CUC48_RS17830 () | 3585307..3586278 | - | 972 | WP_013095181.1 | TIGR03756 family integrating conjugative element protein | - |
| CUC48_RS17835 () | 3586275..3586682 | - | 408 | WP_013095180.1 | TIGR03757 family integrating conjugative element protein | - |
| CUC48_RS17840 () | 3586850..3589275 | - | 2426 | Protein_3399 | ATP-binding protein | - |
| CUC48_RS17845 () | 3589403..3589636 | + | 234 | WP_013095178.1 | PerC family transcriptional regulator | - |
| CUC48_RS17850 () | 3589798..3590202 | - | 405 | WP_007372621.1 | hypothetical protein | - |
| CUC48_RS17855 () | 3590214..3593012 | - | 2799 | WP_013095177.1 | conjugative transfer ATPase | - |
| CUC48_RS17860 () | 3593012..3593431 | - | 420 | WP_035943490.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| CUC48_RS17865 () | 3593473..3594995 | - | 1523 | Protein_3404 | TIGR03752 family integrating conjugative element protein | - |
| CUC48_RS17870 () | 3594992..3595900 | - | 909 | WP_013095174.1 | TIGR03749 family integrating conjugative element protein | - |
| CUC48_RS17875 () | 3595900..3596544 | - | 645 | WP_013095173.1 | TIGR03746 family integrating conjugative element protein | - |
| CUC48_RS17880 () | 3596541..3596915 | - | 375 | WP_007372615.1 | TIGR03750 family conjugal transfer protein | - |
| CUC48_RS17885 () | 3596925..3597290 | - | 366 | WP_007372614.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| CUC48_RS17890 () | 3597304..3597549 | - | 246 | WP_007372613.1 | TIGR03758 family integrating conjugative element protein | - |
| CUC48_RS17895 () | 3597540..3597857 | - | 318 | WP_007372612.1 | hypothetical protein | - |
| CUC48_RS17900 () | 3598063..3598824 | - | 762 | WP_007372609.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| CUC48_RS17905 () | 3598805..3600922 | - | 2118 | WP_013095172.1 | type IV conjugative transfer system coupling protein TraD | - |
| CUC48_RS17910 () | 3600919..3601695 | - | 777 | WP_013095171.1 | hypothetical protein | - |
| CUC48_RS17915 () | 3601699..3602073 | - | 375 | WP_013095170.1 | hypothetical protein | - |
| CUC48_RS17920 () | 3602088..3602732 | - | 645 | WP_013095169.1 | restriction endonuclease | - |
| CUC48_RS17925 () | 3602732..3603262 | - | 531 | WP_013095168.1 | integrating conjugative element protein | - |
| CUC48_RS17930 () | 3603259..3603870 | - | 612 | WP_007372603.1 | hypothetical protein | VF |
| CUC48_RS17935 () | 3603849..3604562 | - | 714 | WP_013095167.1 | TIGR03759 family integrating conjugative element protein | - |
| CUC48_RS17940 () | 3604580..3605437 | - | 858 | WP_013095166.1 | plasmid transfer protein | - |
| CUC48_RS17945 () | 3605556..3606716 | - | 1161 | WP_013095165.1 | IS91 family transposase ISShvi3 | Transposase |
| CUC48_RS17950 () | 3607628..3608746 | - | 1119 | Protein_3421 | hypothetical protein | VF |
| CUC48_RS17955 () | 3608752..3609408 | - | 657 | WP_013095163.1 | hypothetical protein | VF |
| CUC48_RS17960 () | 3609405..3609884 | - | 480 | WP_013095162.1 | hypothetical protein | VF |
| CUC48_RS17965 () | 3609889..3610485 | - | 597 | WP_007372593.1 | hypothetical protein | VF |
| CUC48_RS17970 () | 3610495..3611610 | - | 1116 | WP_013095161.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CUC48_RS17975 () | 3611600..3613174 | - | 1575 | WP_013095160.1 | Type II secretion system protein E | VF |
| CUC48_RS17980 () | 3613182..3613679 | - | 498 | WP_013095159.1 | hypothetical protein | VF |
| CUC48_RS17985 () | 3613666..3614946 | - | 1281 | WP_176682058.1 | hypothetical protein | VF |
| CUC48_RS17990 () | 3614949..3616622 | - | 1674 | WP_013095157.1 | Outer membrane lipoprotein BfpB | VF |
| CUC48_RS17995 () | 3616642..3617085 | - | 444 | WP_007372587.1 | hypothetical protein | VF |
| CUC48_RS18000 () | 3617087..3618373 | - | 1287 | WP_013095156.1 | hypothetical protein | VF |
| CUC48_RS18005 () | 3618606..3619088 | - | 483 | WP_044159004.1 | GNAT family N-acetyltransferase | Toxin Detail |
| CUC48_RS18010 () | 3619079..3619363 | - | 285 | WP_007372584.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| CUC48_RS18015 () | 3619519..3620019 | - | 501 | WP_007372583.1 | single-stranded DNA-binding protein | - |
| CUC48_RS18020 () | 3620095..3620586 | - | 492 | WP_007372582.1 | DUF3577 domain-containing protein | - |
| CUC48_RS18025 () | 3621219..3623231 | - | 2013 | WP_044159002.1 | DNA topoisomerase III | - |
| CUC48_RS18030 () | 3623249..3623971 | - | 723 | WP_013095151.1 | TIGR03761 family integrating conjugative element protein | - |
| CUC48_RS18035 () | 3624218..3625456 | - | 1239 | WP_013095150.1 | helix-turn-helix domain-containing protein | - |
| CUC48_RS18040 () | 3625535..3625765 | - | 231 | WP_013095148.1 | hypothetical protein | - |
| CUC48_RS18045 () | 3625765..3626364 | - | 600 | WP_007372575.1 | DUF2857 domain-containing protein | - |
| CUC48_RS18050 () | 3626449..3627192 | - | 744 | WP_013095147.1 | DUF2786 domain-containing protein | - |
| CUC48_RS18055 () | 3627182..3627439 | - | 258 | WP_007372573.1 | TraR/DksA C4-type zinc finger protein | - |
| CUC48_RS18060 () | 3627432..3629138 | - | 1707 | WP_007372572.1 | ParB family protein | - |
| CUC48_RS18065 () | 3629135..3630499 | - | 1365 | WP_044158999.1 | replicative DNA helicase | - |
| CUC48_RS18070 () | 3630492..3631376 | - | 885 | WP_013095145.1 | Tyrosine-protein kinase CpsD | VF |
| CUC48_RS18075 () | 3631601..3633460 | - | 1860 | WP_003838200.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| CUC48_RS18080 () | 3633614..3635902 | - | 2289 | WP_086529866.1 | FdhF/YdeP family oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|