MGE detailed information
MGE type: Prophage MGE length: 55754 bp
Accession: NZ_CP024677 Location: 2190270..2246023 Organism: Citrobacter freundii strain UMH16 Replicon: chromosome
Accession: NZ_CP024677 Location: 2190270..2246023 Organism: Citrobacter freundii strain UMH16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CUC48_RS10920 () | 2185992..2187029 | + | 1038 | WP_121581635.1 | hypothetical protein | - |
| CUC48_RS10925 () | 2187128..2188009 | - | 882 | WP_003034964.1 | protease HtpX | - |
| CUC48_RS10930 () | 2188202..2190250 | - | 2049 | WP_003034960.1 | carboxy terminal-processing peptidase | - |
| CUC48_RS10935 () | 2190270..2190956 | - | 687 | WP_003034957.1 | RNA chaperone ProQ | - |
| CUC48_RS10940 () | 2191053..2191550 | - | 498 | WP_003034953.1 | GAF domain-containing protein | - |
| CUC48_RS10945 () | 2191679..2192962 | + | 1284 | WP_121581637.1 | membrane integrity lipid transport subunit YebS | - |
| CUC48_RS10950 () | 2192931..2195564 | + | 2634 | WP_003034947.1 | hypothetical protein | VF |
| CUC48_RS10955 () | 2195677..2197065 | + | 1389 | WP_046671252.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| CUC48_RS10960 () | 2197166..2197402 | + | 237 | WP_029139506.1 | DUF1480 family protein | - |
| CUC48_RS10965 () | 2197505..2197696 | + | 192 | WP_003034941.1 | YebW family protein | - |
| CUC48_RS10970 () | 2197697..2198338 | - | 642 | WP_003034937.1 | protein-serine/threonine phosphatase | - |
| CUC48_RS10975 () | 2198679..2198777 | + | 99 | WP_072211991.1 | DinI-like family protein | - |
| CUC48_RS10980 () | 2198890..2199558 | + | 669 | WP_121581639.1 | SOS response-associated peptidase | - |
| CUC48_RS10985 () | 2199559..2199948 | - | 390 | WP_121581641.1 | LexA family transcriptional regulator | - |
| CUC48_RS26290 () | 2199951..2200190 | - | 240 | WP_141110928.1 | DNA polymerase V | - |
| CUC48_RS10990 () | 2200268..2200510 | + | 243 | WP_121581643.1 | DinI family protein | - |
| CUC48_RS10995 () | 2200611..2201351 | + | 741 | WP_121581645.1 | hypothetical protein | - |
| CUC48_RS11000 () | 2201348..2202166 | + | 819 | WP_021578624.1 | DUF3037 domain-containing protein | - |
| CUC48_RS11005 () | 2202341..2203897 | - | 1557 | WP_121581646.1 | tail fiber domain-containing protein | - |
| CUC48_RS11010 () | 2203959..2207528 | - | 3570 | WP_121581647.1 | host specificity protein J | - |
| CUC48_RS11015 () | 2207581..2208183 | - | 603 | WP_121581796.1 | tail assembly protein | - |
| CUC48_RS26085 () | 2208239..2208574 | - | 336 | WP_153072184.1 | hypothetical protein | - |
| CUC48_RS11020 () | 2208604..2209314 | - | 711 | WP_121581648.1 | C40 family peptidase | - |
| CUC48_RS11025 () | 2209316..2210071 | - | 756 | WP_121581650.1 | phage minor tail protein L | - |
| CUC48_RS11030 () | 2210068..2210415 | - | 348 | WP_047499067.1 | phage tail protein | - |
| CUC48_RS11035 () | 2210419..2213562 | - | 3144 | WP_047499065.1 | phage tail tape measure protein | - |
| CUC48_RS11040 () | 2213546..2213860 | - | 315 | WP_071845155.1 | phage tail assembly protein T | - |
| CUC48_RS11045 () | 2213869..2214300 | - | 432 | WP_047715733.1 | phage minor tail protein G | - |
| CUC48_RS11050 () | 2214311..2215054 | - | 744 | WP_044700348.1 | phage tail protein | - |
| CUC48_RS11055 () | 2215064..2215465 | - | 402 | WP_044700350.1 | phage minor tail U family protein | - |
| CUC48_RS11060 () | 2215462..2216040 | - | 579 | WP_044700352.1 | phage tail protein | - |
| CUC48_RS11065 () | 2216050..2216325 | - | 276 | WP_044700354.1 | ATP-binding protein | - |
| CUC48_RS11070 () | 2216318..2216644 | - | 327 | WP_047499162.1 | DUF2190 family protein | - |
| CUC48_RS11075 () | 2216736..2218769 | - | 2034 | WP_121581652.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| CUC48_RS11080 () | 2218714..2220222 | - | 1509 | WP_121581654.1 | phage portal protein | - |
| CUC48_RS11085 () | 2220219..2220434 | - | 216 | WP_001082414.1 | hypothetical protein | - |
| CUC48_RS11090 () | 2220431..2222533 | - | 2103 | WP_047499052.1 | phage terminase large subunit family protein | - |
| CUC48_RS11095 () | 2222533..2223021 | - | 489 | WP_044700360.1 | DUF1441 family protein | - |
| CUC48_RS11100 () | 2223272..2223475 | - | 204 | WP_044703081.1 | hypothetical protein | - |
| CUC48_RS11105 () | 2223928..2224476 | - | 549 | WP_161959261.1 | DUF2514 domain-containing protein | - |
| CUC48_RS11110 () | 2224473..2225021 | - | 549 | WP_121581658.1 | lysozyme | - |
| CUC48_RS11115 () | 2224993..2225271 | - | 279 | WP_016150433.1 | hypothetical protein | - |
| CUC48_RS11125 () | 2225653..2226258 | - | 606 | WP_121581662.1 | hypothetical protein | - |
| CUC48_RS11130 () | 2226272..2227312 | - | 1041 | WP_121581664.1 | DUF968 domain-containing protein | - |
| CUC48_RS11135 () | 2227309..2227668 | - | 360 | WP_121581666.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CUC48_RS11140 () | 2227671..2227871 | - | 201 | WP_047357957.1 | hypothetical protein | - |
| CUC48_RS11145 () | 2228001..2228246 | - | 246 | WP_075553025.1 | hypothetical protein | - |
| CUC48_RS11150 () | 2228292..2228525 | - | 234 | WP_121581668.1 | DinI-like family protein | - |
| CUC48_RS11155 () | 2228832..2229110 | - | 279 | WP_115601939.1 | hypothetical protein | - |
| CUC48_RS11160 () | 2229925..2230395 | - | 471 | Protein_2135 | DNA cytosine methyltransferase | - |
| CUC48_RS11165 () | 2230368..2230808 | - | 441 | WP_121581670.1 | DUF550 domain-containing protein | - |
| CUC48_RS11170 () | 2230805..2231320 | - | 516 | WP_071698687.1 | hypothetical protein | - |
| CUC48_RS11175 () | 2231322..2231624 | - | 303 | WP_121581672.1 | hypothetical protein | - |
| CUC48_RS11180 () | 2231621..2231959 | - | 339 | WP_121581798.1 | DUF977 family protein | - |
| CUC48_RS11185 () | 2231965..2232381 | - | 417 | WP_121581675.1 | PerC family transcriptional regulator | - |
| CUC48_RS11190 () | 2232397..2232942 | - | 546 | WP_136397082.1 | replication protein | - |
| CUC48_RS11195 () | 2232854..2233765 | - | 912 | WP_202617083.1 | hypothetical protein | - |
| CUC48_RS11200 () | 2234018..2234572 | - | 555 | WP_121581677.1 | hypothetical protein | - |
| CUC48_RS11205 () | 2234575..2234805 | - | 231 | WP_016150453.1 | helix-turn-helix domain-containing protein | - |
| CUC48_RS11210 () | 2234928..2235323 | + | 396 | WP_032948107.1 | helix-turn-helix domain-containing protein | - |
| CUC48_RS26295 () | 2235537..2235752 | + | 216 | WP_057064237.1 | hypothetical protein | - |
| CUC48_RS11220 () | 2235810..2236136 | + | 327 | WP_032944383.1 | Rrf2 family transcriptional regulator | - |
| CUC48_RS11225 () | 2236278..2238749 | + | 2472 | WP_121581679.1 | exonuclease | - |
| CUC48_RS11230 () | 2238813..2239073 | + | 261 | WP_072211989.1 | hypothetical protein | - |
| CUC48_RS11235 () | 2239051..2240130 | + | 1080 | WP_121581681.1 | hypothetical protein ; Integrase | Integrase |
| - () | 2240260..2240401 | + | 142 | - | - | Antitoxin Detail |
| - () | 2240263..2240366 | - | 104 | - | - | Toxin Detail |
| CUC48_RS11240 () | 2240522..2240860 | - | 339 | WP_003034934.1 | YebY family protein | - |
| CUC48_RS11245 () | 2240881..2241753 | - | 873 | WP_032935389.1 | copper homeostasis membrane protein CopD | - |
| CUC48_RS11250 () | 2241757..2242131 | - | 375 | WP_003034928.1 | CopC domain-containing protein YobA | - |
| CUC48_RS11255 () | 2242275..2242505 | + | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| CUC48_RS11260 () | 2242612..2243268 | + | 657 | WP_003841657.1 | carbon-nitrogen hydrolase family protein | - |
| CUC48_RS11265 () | 2243292..2243954 | + | 663 | WP_003833802.1 | exodeoxyribonuclease X | - |
| CUC48_RS11270 () | 2243945..2245999 | - | 2055 | WP_174335066.1 | oligopeptidase B | - |
| CUC48_RS11275 () | 2246086..2246745 | - | 660 | WP_061548578.1 | tellurite resistance TerB family protein | - |
| CUC48_RS11280 () | 2246840..2247193 | - | 354 | WP_032949525.1 | protein YebF | - |
| CUC48_RS11285 () | 2247315..2247605 | - | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| CUC48_RS11290 () | 2247737..2248915 | + | 1179 | WP_054528504.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| CUC48_RS11295 () | 2248983..2249624 | - | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|