MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 64883 bp
Accession: NZ_CP024675 Location: 4895454..4960336 Organism: Citrobacter werkmanii strain UMH18 Replicon: chromosome
Accession: NZ_CP024675 Location: 4895454..4960336 Organism: Citrobacter werkmanii strain UMH18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CUC50_RS23775 () | 4891552..4892316 | - | 765 | WP_038636797.1 | gluconate 5-dehydrogenase | - |
| CUC50_RS23780 () | 4892328..4893371 | - | 1044 | WP_121529895.1 | L-idonate 5-dehydrogenase | - |
| CUC50_RS23785 () | 4893588..4894109 | + | 522 | WP_121529896.1 | gluconokinase | - |
| CUC50_RS23790 () | 4894140..4895159 | - | 1020 | WP_121529897.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| CUC50_RS23800 () | 4895697..4897382 | + | 1686 | WP_121529898.1 | hypothetical protein ; Integrase | Integrase |
| CUC50_RS23805 () | 4897630..4898658 | - | 1029 | WP_121529899.1 | RelA/SpoT domain-containing protein | - |
| CUC50_RS23810 () | 4899565..4899816 | + | 252 | WP_032942207.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| CUC50_RS23815 () | 4899820..4901115 | + | 1296 | WP_121529900.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| CUC50_RS23820 () | 4901203..4901469 | + | 267 | WP_023302770.1 | hypothetical protein | - |
| CUC50_RS23825 () | 4901581..4902234 | + | 654 | WP_058656242.1 | HNH endonuclease | - |
| CUC50_RS23830 () | 4902290..4903879 | - | 1590 | WP_121529901.1 | TraI domain-containing protein | - |
| CUC50_RS23835 () | 4904050..4904985 | + | 936 | WP_153070618.1 | erythromycin esterase family protein | - |
| CUC50_RS23840 () | 4905012..4905383 | - | 372 | WP_009652327.1 | hypothetical protein | - |
| CUC50_RS23845 () | 4905449..4906354 | - | 906 | WP_121529903.1 | DUF1738 domain-containing protein | - |
| CUC50_RS23850 () | 4906419..4906709 | - | 291 | WP_014908067.1 | hypothetical protein | - |
| CUC50_RS23855 () | 4907043..4907243 | + | 201 | WP_001561269.1 | cell surface composition regulator GlgS | - |
| CUC50_RS23860 () | 4907282..4908154 | - | 873 | WP_121529904.1 | HNH endonuclease | - |
| CUC50_RS23865 () | 4908366..4909286 | + | 921 | WP_121529905.1 | HrgA protein | - |
| CUC50_RS23870 () | 4909367..4911907 | + | 2541 | WP_121529906.1 | type I restriction-modification system subunit M | - |
| CUC50_RS23875 () | 4911900..4913174 | + | 1275 | WP_121529907.1 | restriction endonuclease subunit S | - |
| CUC50_RS23880 () | 4913167..4916433 | + | 3267 | WP_121529908.1 | type I restriction endonuclease subunit R | - |
| CUC50_RS23885 () | 4916433..4917137 | + | 705 | WP_202614070.1 | M48 family metallopeptidase | - |
| CUC50_RS23890 () | 4917121..4918623 | - | 1503 | WP_121529910.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| CUC50_RS23895 () | 4918620..4919981 | - | 1362 | WP_121529911.1 | integrating conjugative element protein | - |
| CUC50_RS23900 () | 4919993..4920925 | - | 933 | WP_202614071.1 | TIGR03756 family integrating conjugative element protein | - |
| CUC50_RS23905 () | 4921139..4921729 | + | 591 | WP_116956004.1 | Tyrosine recombinase XerC | VF |
| CUC50_RS23910 () | 4922098..4922610 | + | 513 | WP_009654430.1 | hypothetical protein | VF |
| CUC50_RS23915 () | 4922714..4923394 | + | 681 | WP_121529912.1 | hypothetical protein | VF |
| CUC50_RS23920 () | 4923405..4925912 | + | 2508 | WP_121529913.1 | hypothetical protein | VF |
| CUC50_RS23925 () | 4925909..4926862 | + | 954 | WP_121529914.1 | fimbrial protein | - |
| CUC50_RS23930 () | 4926880..4927842 | + | 963 | WP_121529915.1 | hypothetical protein | VF |
| CUC50_RS23935 () | 4927885..4928631 | + | 747 | WP_121529916.1 | class I SAM-dependent methyltransferase | - |
| CUC50_RS23940 () | 4928632..4929411 | - | 780 | WP_121529917.1 | creatininase family protein | - |
| CUC50_RS23945 () | 4929389..4930747 | - | 1359 | WP_063408541.1 | amino acid permease | - |
| CUC50_RS23950 () | 4930791..4931165 | - | 375 | WP_121529918.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| CUC50_RS23955 () | 4931387..4931662 | - | 276 | WP_121529919.1 | helix-turn-helix domain-containing protein | - |
| CUC50_RS23960 () | 4931766..4931996 | + | 231 | WP_052932364.1 | helix-turn-helix domain-containing protein | - |
| CUC50_RS23965 () | 4932079..4932303 | + | 225 | WP_121529920.1 | helix-turn-helix domain-containing protein | - |
| CUC50_RS23975 () | 4932795..4935434 | - | 2640 | WP_121529922.1 | conjugative transfer ATPase | - |
| CUC50_RS23980 () | 4935431..4935790 | - | 360 | WP_121529923.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| CUC50_RS23985 () | 4935787..4937082 | - | 1296 | WP_121529924.1 | TIGR03752 family integrating conjugative element protein | - |
| CUC50_RS23990 () | 4937079..4937846 | - | 768 | WP_121529925.1 | TIGR03749 family integrating conjugative element protein | - |
| CUC50_RS23995 () | 4937843..4938502 | - | 660 | WP_121529926.1 | TIGR03746 family integrating conjugative element protein | - |
| CUC50_RS24000 () | 4938499..4938852 | - | 354 | WP_121529927.1 | TIGR03750 family conjugal transfer protein | - |
| CUC50_RS24005 () | 4938854..4939171 | - | 318 | WP_012737286.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| CUC50_RS24010 () | 4939181..4939414 | - | 234 | WP_121529928.1 | TIGR03758 family integrating conjugative element protein | - |
| CUC50_RS24015 () | 4939407..4939715 | - | 309 | WP_121529929.1 | raqprd family integrative conjugative element protein | - |
| CUC50_RS24020 () | 4940146..4941852 | - | 1707 | WP_121529930.1 | 50S ribosome-binding GTPase | - |
| CUC50_RS24025 () | 4941864..4944053 | - | 2190 | WP_121529931.1 | hypothetical protein | - |
| CUC50_RS24030 () | 4944338..4944970 | - | 633 | WP_121529932.1 | DUF4400 domain-containing protein | - |
| CUC50_RS24035 () | 4944967..4946985 | - | 2019 | WP_121529933.1 | type IV conjugative transfer system coupling protein TraD | - |
| CUC50_RS24040 () | 4946982..4947500 | - | 519 | WP_121529934.1 | hypothetical protein | VF |
| CUC50_RS24045 () | 4947479..4948153 | - | 675 | WP_121529935.1 | TIGR03759 family integrating conjugative element protein | - |
| CUC50_RS24050 () | 4948157..4948816 | - | 660 | WP_121529936.1 | hypothetical protein | VF |
| CUC50_RS24055 () | 4948928..4949311 | - | 384 | WP_121529937.1 | hypothetical protein | - |
| CUC50_RS24060 () | 4949382..4949825 | - | 444 | WP_121529938.1 | DUF3577 domain-containing protein | - |
| CUC50_RS24070 () | 4950212..4950682 | + | 471 | WP_121529940.1 | Hsp20 family protein | - |
| CUC50_RS24075 () | 4950730..4952556 | - | 1827 | WP_121529941.1 | DNA topoisomerase III | - |
| CUC50_RS24080 () | 4952748..4953173 | - | 426 | WP_121529942.1 | DUF3158 family protein | - |
| CUC50_RS24085 () | 4953163..4953774 | - | 612 | WP_121529943.1 | TIGR03761 family integrating conjugative element protein | - |
| CUC50_RS24090 () | 4953934..4954806 | - | 873 | WP_121529944.1 | hypothetical protein | - |
| CUC50_RS24095 () | 4954796..4955353 | - | 558 | WP_121529945.1 | DUF2857 domain-containing protein | - |
| CUC50_RS24100 () | 4955337..4956620 | - | 1284 | WP_121529946.1 | chromosome partitioning protein ParB | - |
| CUC50_RS24105 () | 4956637..4956831 | - | 195 | WP_001561320.1 | AlpA family transcriptional regulator | - |
| CUC50_RS24110 () | 4956970..4957860 | - | 891 | WP_121529947.1 | hypothetical protein | - |
| CUC50_RS24115 () | 4958021..4958800 | + | 780 | WP_121529948.1 | HNH endonuclease | - |
| CUC50_RS24120 () | 4959083..4959811 | - | 729 | WP_121529949.1 | Fic family protein | - |
| CUC50_RS24125 () | 4959808..4960071 | - | 264 | WP_079775624.1 | hypothetical protein | - |
| CUC50_RS24130 () | 4960509..4961363 | - | 855 | WP_085048382.1 | GIY-YIG nuclease family protein | - |
| CUC50_RS24140 () | 4961703..4961885 | - | 183 | WP_121529950.1 | endoribonuclease | - |
| CUC50_RS24145 () | 4962663..4964033 | + | 1371 | WP_038636869.1 | tyrosine phenol-lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|