MGE detailed information
MGE type: Genomic_island MGE length: 22058 bp
Accession: NZ_CP024672 Location: 1231787..1253844 Organism: Citrobacter freundii strain HM38 Replicon: chromosome
Accession: NZ_CP024672 Location: 1231787..1253844 Organism: Citrobacter freundii strain HM38 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CUC52_RS05825 () | 1227418..1229742 | - | 2325 | WP_060855253.1 | Fe(3+) dicitrate transport protein FecA | - |
| CUC52_RS05830 () | 1229829..1230782 | - | 954 | WP_060855254.1 | fec operon regulator FecR | - |
| CUC52_RS05835 () | 1230779..1231300 | - | 522 | WP_003846770.1 | sigma-70 family RNA polymerase sigma factor | - |
| CUC52_RS24135 () | 1231787..1232398 | - | 612 | WP_153070797.1 | hypothetical protein | - |
| CUC52_RS05840 () | 1232404..1233357 | - | 954 | WP_032936169.1 | matrixin family metalloprotease | - |
| CUC52_RS05850 () | 1233680..1234815 | - | 1136 | Protein_1117 | IS3 family transposase | - |
| CUC52_RS05860 () | 1234853..1237303 | - | 2451 | WP_060855255.1 | hypothetical protein | - |
| CUC52_RS05865 () | 1237308..1241207 | - | 3900 | WP_060855256.1 | hypothetical protein | - |
| CUC52_RS05875 () | 1241821..1242078 | + | 258 | WP_003836694.1 | hypothetical protein | Antitoxin Detail |
| CUC52_RS05880 () | 1242079..1242411 | + | 333 | WP_003836692.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| CUC52_RS05890 () | 1242886..1243803 | + | 918 | WP_054528287.1 | nitrogen assimilation transcriptional regulator NAC | - |
| CUC52_RS05895 () | 1243905..1244855 | + | 951 | WP_016149950.1 | HTH-type transcriptional regulator Cbl | - |
| CUC52_RS05905 () | 1245171..1246658 | - | 1488 | WP_003846749.1 | EmmdR/YeeO family multidrug/toxin efflux MATE transporter | - |
| CUC52_RS05915 () | 1246938..1248107 | - | 1170 | WP_060855257.1 | MFS transporter | - |
| CUC52_RS05920 () | 1248125..1248844 | - | 720 | WP_060855258.1 | HAD family phosphatase | - |
| CUC52_RS05925 () | 1248837..1251203 | - | 2367 | WP_060855259.1 | carbamoyltransferase HypF | - |
| CUC52_RS05930 () | 1251175..1252212 | - | 1038 | WP_003846740.1 | hydrogenase expression/formation protein HypE | - |
| CUC52_RS05935 () | 1252209..1252808 | - | 600 | WP_044700624.1 | cysteine hydrolase | - |
| CUC52_RS05940 () | 1252955..1253844 | + | 890 | Protein_1130 | HTH-type transcriptional regulator HdfR | VF |
| CUC52_RS05945 () | 1254116..1254475 | + | 360 | WP_003030826.1 | purine nucleoside phosphoramidase | - |
| CUC52_RS05950 () | 1254478..1254852 | + | 375 | WP_003030823.1 | YcfL family protein | - |
| CUC52_RS05955 () | 1254866..1255507 | + | 642 | WP_003030820.1 | penicillin-binding protein activator LpoB | - |
| CUC52_RS05960 () | 1255488..1256312 | + | 825 | WP_003030819.1 | thiamine kinase | - |
| CUC52_RS05965 () | 1256323..1257348 | + | 1026 | WP_060855260.1 | beta-N-acetylhexosaminidase | - |
| CUC52_RS05970 () | 1257370..1257912 | + | 543 | WP_003030817.1 | alpha/beta hydrolase YcfP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|