MGE detailed information
MGE type: Conjugative plasmid MGE length: 107274 bp
Accession: NZ_CP024652 Location: 1..107274 Organism: Escherichia coli strain BH100 substr. MG2014 Replicon: plasmid pBH100-1
Accession: NZ_CP024652 Location: 1..107274 Organism: Escherichia coli strain BH100 substr. MG2014 Replicon: plasmid pBH100-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDW44_RS25855 () | 34..1713 | + | 1680 | WP_000179844.1 | DDE-type integrase/transposase/recombinase | - |
| CDW44_RS25860 () | 1716..2576 | + | 861 | WP_000344784.1 | TniB family NTP-binding protein | - |
| CDW44_RS25865 () | 2627..4171 | - | 1545 | WP_000287615.1 | IS3 family transposase IS1353 | Transposase |
| CDW44_RS25870 () | 4294..5817 | + | 1524 | WP_001324342.1 | IS21 family transposase IS1326 | Transposase |
| CDW44_RS25875 () | 5807..6589 | + | 783 | WP_001163403.1 | IS21 family transposase IS1326 | Transposase |
| CDW44_RS25880 () | 6765..7265 | - | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| CDW44_RS25890 () | 7393..8232 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| CDW44_RS25895 () | 8226..8573 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| CDW44_RS25900 () | 8737..9528 | - | 792 | WP_001206316.1 | Streptomycin 3''-adenylyltransferase | ARG |
| CDW44_RS25905 () | 9677..10690 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| CDW44_RS26880 () | 10893..11243 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| CDW44_RS25915 () | 11369..11929 | + | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| CDW44_RS25920 () | 11932..14898 | + | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| CDW44_RS25925 () | 14965..15342 | + | 378 | WP_000656305.1 | GNAT family N-acetyltransferase | - |
| CDW44_RS25930 () | 15543..16202 | - | 660 | WP_000412211.1 | Chloramphenicol acetyltransferase | ARG |
| CDW44_RS25945 () | 16481..17178 | + | 698 | Protein_15 | IS1 family transposase | - |
| CDW44_RS25960 () | 18626..18860 | + | 235 | Protein_16 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CDW44_RS25965 () | 18988..19269 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| CDW44_RS25970 () | 19392..19742 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| CDW44_RS25975 () | 19745..20707 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| CDW44_RS25980 () | 20854..21147 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| CDW44_RS25990 () | 21224..21907 | + | 684 | WP_000085883.1 | DNA methylase | - |
| CDW44_RS25995 () | 21908..22129 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| CDW44_RS26000 () | 22143..22577 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| CDW44_RS27135 () | 22628..23404 | + | 777 | WP_001383963.1 | hypothetical protein | - |
| CDW44_RS26015 () | 23945..24247 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| CDW44_RS26020 () | 24294..24716 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| CDW44_RS26025 () | 24713..24904 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| CDW44_RS26045 () | 25940..26170 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| CDW44_RS26050 () | 26222..27583 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| CDW44_RS26055 () | 27630..28193 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| CDW44_RS26080 () | 29047..29574 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| CDW44_RS26085 () | 29632..29865 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| CDW44_RS26090 () | 29926..31308 | + | 1383 | Protein_33 | ParB/RepB/Spo0J family partition protein | - |
| CDW44_RS26100 () | 31417..32625 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| CDW44_RS26105 () | 32641..32760 | - | 120 | Protein_35 | LysR family transcriptional regulator | - |
| CDW44_RS26110 () | 32991..34196 | - | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| CDW44_RS26115 () | 34640..34960 | + | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| CDW44_RS26125 () | 35146..36126 | - | 981 | WP_039025567.1 | IS5 family transposase ISKpn26 | Transposase |
| CDW44_RS26130 () | 36196..36453 | - | 258 | Protein_39 | transporter substrate-binding domain-containing protein | - |
| CDW44_RS26135 () | 36586..37137 | - | 552 | WP_011152973.1 | hypothetical protein | - |
| CDW44_RS26140 () | 37134..38477 | - | 1344 | WP_014229371.1 | aspartate aminotransferase family protein | - |
| CDW44_RS26145 () | 38610..39467 | - | 858 | WP_080528056.1 | MurR/RpiR family transcriptional regulator | - |
| CDW44_RS26150 () | 39797..40237 | + | 441 | WP_014229374.1 | helix-turn-helix transcriptional regulator | - |
| CDW44_RS26155 () | 40311..40742 | - | 432 | Protein_44 | L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha | - |
| CDW44_RS26160 () | 40868..41683 | + | 816 | WP_000018326.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| CDW44_RS26170 () | 42013..42992 | - | 980 | Protein_46 | IS5 family transposase ISKpn26 | Transposase |
| CDW44_RS26175 () | 43037..43405 | + | 369 | WP_086255707.1 | amino acid-binding protein | - |
| CDW44_RS26180 () | 43413..44099 | + | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| CDW44_RS26185 () | 44077..44700 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| CDW44_RS26190 () | 44782..45987 | + | 1206 | WP_001089064.1 | Tetracycline resistance protein, class B | ARG |
| CDW44_RS26195 () | 46100..46693 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| CDW44_RS26200 () | 46826..47197 | + | 372 | WP_035689358.1 | Transposon Tn10 TetD protein | VF |
| CDW44_RS26205 () | 47207..48415 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| CDW44_RS26215 () | 48525..49106 | + | 582 | Protein_54 | hypothetical protein | - |
| CDW44_RS26220 () | 49161..49595 | + | 435 | WP_000845928.1 | conjugation system SOS inhibitor PsiB | - |
| CDW44_RS26225 () | 49592..50311 | + | 720 | WP_000116348.1 | plasmid SOS inhibition protein A | - |
| - () | 50323..50547 | + | 225 | NuclAT_0 | - | - |
| - () | 50323..50547 | + | 225 | NuclAT_0 | - | - |
| - () | 50323..50547 | + | 225 | NuclAT_0 | - | - |
| - () | 50323..50547 | + | 225 | NuclAT_0 | - | - |
| CDW44_RS27025 () | 50332..50511 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - () | 50480..50545 | + | 66 | - | - | Antitoxin Detail |
| CDW44_RS26230 () | 50591..50749 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| CDW44_RS27140 () | 50987..51364 | - | 378 | Protein_59 | hypothetical protein | - |
| CDW44_RS26250 () | 51663..51959 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| CDW44_RS26255 () | 52070..52891 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| CDW44_RS26260 () | 53186..53788 | - | 603 | WP_000243713.1 | hypothetical protein | VF |
| CDW44_RS26270 () | 54111..54494 | + | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| CDW44_RS26275 () | 54688..55359 | + | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| CDW44_RS26280 () | 55496..55723 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| CDW44_RS26285 () | 55756..56115 | + | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| CDW44_RS26290 () | 56130..56441 | + | 312 | WP_052973175.1 | type IV conjugative transfer system protein TraL | - |
| CDW44_RS26295 () | 56463..57029 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| CDW44_RS26300 () | 57016..57744 | + | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| CDW44_RS26305 () | 57744..59195 | + | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| CDW44_RS26310 () | 59164..59751 | + | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| CDW44_RS26315 () | 59690..60058 | + | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| CDW44_RS26320 () | 60055..60570 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CDW44_RS26325 () | 60705..60926 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| CDW44_RS26330 () | 60919..61332 | + | 414 | WP_000549589.1 | hypothetical protein | - |
| CDW44_RS26335 () | 61325..61798 | + | 474 | WP_000549568.1 | hypothetical protein | - |
| CDW44_RS26340 () | 61878..62096 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| CDW44_RS26885 () | 62124..62471 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| CDW44_RS26350 () | 62597..65227 | + | 2631 | WP_000069777.1 | type IV secretion system protein TraC | - |
| CDW44_RS26355 () | 65224..65610 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| CDW44_RS26360 () | 65607..66239 | + | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| CDW44_RS26365 () | 66236..67228 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| CDW44_RS26370 () | 67258..67563 | + | 306 | WP_000224416.1 | hypothetical protein | - |
| CDW44_RS26375 () | 67572..68210 | + | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CDW44_RS26380 () | 68207..70057 | + | 1851 | WP_099989932.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CDW44_RS26385 () | 70084..70341 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| CDW44_RS26390 () | 70334..71077 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CDW44_RS26395 () | 71091..71435 | + | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| CDW44_RS26400 () | 71554..71838 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CDW44_RS26405 () | 71825..72370 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CDW44_RS26410 () | 72300..72647 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| CDW44_RS26415 () | 72595..73020 | + | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| CDW44_RS26420 () | 73007..74380 | + | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| CDW44_RS26425 () | 74377..77199 | + | 2823 | WP_001007039.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CDW44_RS26430 () | 77215..77700 | + | 486 | WP_000605870.1 | hypothetical protein | - |
| CDW44_RS26435 () | 77749..78480 | + | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| CDW44_RS26440 () | 78683..79420 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| CDW44_RS26445 () | 79471..81705 | + | 2235 | WP_000009330.1 | type IV conjugative transfer system coupling protein TraD | - |
| CDW44_RS26450 () | 81705..86975 | + | 5271 | WP_021519987.1 | Multifunctional conjugation protein TraI | Relaxase |
| CDW44_RS26455 () | 86995..87741 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| CDW44_RS26460 () | 87800..88660 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| CDW44_RS26465 () | 88763..89323 | + | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| CDW44_RS26470 () | 89452..89664 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| CDW44_RS26475 () | 89909..90370 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| CDW44_RS26480 () | 90416..90625 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| CDW44_RS26485 () | 90663..91253 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| CDW44_RS26490 () | 91493..91747 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| CDW44_RS26500 () | 91985..92059 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| CDW44_RS26505 () | 92052..92909 | + | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| CDW44_RS27030 () | 93610..93750 | + | 141 | WP_001333237.1 | hypothetical protein | - |
| CDW44_RS26515 () | 93848..94501 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| CDW44_RS26890 () | 94594..94851 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| CDW44_RS26520 () | 94784..95185 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| CDW44_RS26530 () | 95470..95982 | + | 513 | Protein_114 | DUF262 domain-containing protein | - |
| CDW44_RS26535 () | 96131..96991 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| CDW44_RS26540 () | 97174..97731 | - | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| CDW44_RS26545 () | 97893..100898 | + | 3006 | WP_001143775.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CDW44_RS26550 () | 100933..101733 | + | 801 | Protein_118 | DUF262 domain-containing protein | - |
| CDW44_RS26555 () | 101762..102459 | + | 698 | Protein_119 | IS1 family transposase | - |
| CDW44_RS26560 () | 102567..103001 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| CDW44_RS26565 () | 103073..103423 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| CDW44_RS26570 () | 103437..103712 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| CDW44_RS26575 () | 103748..104170 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| CDW44_RS26580 () | 104222..105916 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| CDW44_RS26585 () | 105934..106296 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| CDW44_RS26590 () | 106293..106529 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| CDW44_RS26595 () | 106565..107233 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|