MGE detailed information
MGE type: Prophage MGE length: 99091 bp
Accession: NZ_CP024618 Location: 2325584..2424674 Organism: Escherichia coli strain SMN152SH1 Replicon: chromosome
Accession: NZ_CP024618 Location: 2325584..2424674 Organism: Escherichia coli strain SMN152SH1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR916_RS13675 () | 2320738..2321679 | - | 942 | WP_001251313.1 | ABC transporter permease | - |
| CR916_RS13680 () | 2321680..2322657 | - | 978 | WP_095585825.1 | ABC transporter ATP-binding protein | - |
| CR916_RS13685 () | 2322709..2323854 | - | 1146 | WP_000047456.1 | ABC transporter substrate-binding protein | - |
| CR916_RS13690 () | 2324099..2325505 | - | 1407 | WP_000760615.1 | PLP-dependent aminotransferase family protein | - |
| CR916_RS13695 () | 2325584..2326000 | - | 417 | WP_077879189.1 | type II toxin-antitoxin system antitoxin HicB | Antitoxin Detail |
| CR916_RS13700 () | 2326046..2326222 | - | 177 | WP_032195248.1 | type II toxin-antitoxin system mRNA interferase toxin HicA | Toxin Detail |
| CR916_RS13705 () | 2326444..2326674 | + | 231 | WP_000494244.1 | YncJ family protein | - |
| CR916_RS13710 () | 2326766..2328727 | - | 1962 | WP_024177737.1 | 23S rRNA 5-hydroxycytidine C2501 synthase | - |
| CR916_RS13715 () | 2328800..2329336 | - | 537 | WP_062881684.1 | DNA-binding transcriptional regulator SutR | - |
| CR916_RS13720 () | 2329389..2330603 | + | 1215 | WP_071796541.1 | BenE family transporter YdcO | - |
| CR916_RS13725 () | 2330643..2331851 | - | 1209 | WP_074433958.1 | IS200-IS605 family transposase IS609 | Transposase |
| CR916_RS13730 () | 2331859..2332365 | + | 507 | Protein_2357 | IS200-IS605 family transposase IS609 | Transposase |
| CR916_RS13735 () | 2332383..2333051 | - | 669 | WP_001261013.1 | DUF3313 domain-containing protein | - |
| CR916_RS13740 () | 2333354..2333947 | - | 594 | WP_000586728.1 | tellurite resistance methyltransferase TehB | - |
| CR916_RS13745 () | 2333944..2334936 | - | 993 | WP_074433957.1 | dicarboxylate transporter/tellurite-resistance protein TehA | - |
| CR916_RS13750 () | 2335060..2336040 | + | 981 | WP_062881681.1 | LbetaH domain-containing protein | - |
| CR916_RS13755 () | 2336035..2336571 | - | 537 | WP_000140884.1 | 50S ribosomal protein L7/L12-serine acetyltransferase | - |
| CR916_RS13760 () | 2336634..2336858 | - | 225 | WP_001296778.1 | YdcH family protein | - |
| CR916_RS13770 () | 2336998..2338653 | - | 1656 | WP_062881680.1 | glucan biosynthesis protein OpgD | - |
| CR916_RS13780 () | 2338878..2340221 | - | 1344 | WP_062881679.1 | VOC family protein | - |
| CR916_RS13785 () | 2340438..2341361 | + | 924 | WP_000414564.1 | LysR family transcriptional regulator | - |
| CR916_RS13795 () | 2341399..2343039 | - | 1641 | Protein_2367 | Methyl-accepting chemotaxis protein III | VF |
| CR916_RS30770 () | 2343415..2343537 | + | 123 | Protein_2368 | IS3 family transposase | - |
| CR916_RS13800 () | 2343644..2344224 | + | 581 | Protein_2369 | IS3 family transposase IS2 | Transposase |
| CR916_RS13805 () | 2344212..2344682 | - | 471 | WP_095585824.1 | terminase small subunit | - |
| CR916_RS13810 () | 2344971..2345336 | - | 366 | WP_001303046.1 | HNH endonuclease | - |
| CR916_RS13815 () | 2345378..2345602 | + | 225 | WP_000074669.1 | YlcI/YnfO family protein | - |
| CR916_RS13820 () | 2345684..2345998 | - | 315 | WP_001303878.1 | PerC family transcriptional regulator | - |
| CR916_RS30775 () | 2346240..2346380 | - | 141 | WP_001345149.1 | hypothetical protein | - |
| CR916_RS30250 () | 2346525..2346710 | - | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| CR916_RS13835 () | 2346927..2347419 | - | 493 | Protein_2376 | lysozyme RrrD | - |
| CR916_RS13840 () | 2347419..2347634 | - | 216 | WP_024164617.1 | class II holin family protein | - |
| CR916_RS13850 () | 2348073..2349920 | - | 1848 | Protein_2378 | DUF1737 domain-containing protein | - |
| CR916_RS30255 () | 2350243..2350495 | - | 253 | Protein_2379 | DUF3927 family protein | - |
| CR916_RS13860 () | 2350492..2350884 | - | 393 | Protein_2380 | tellurite resistance TerB family protein | - |
| CR916_RS13870 () | 2351367..2352424 | - | 1058 | Protein_2381 | site-specific DNA-methyltransferase | - |
| CR916_RS13875 () | 2352576..2352773 | - | 198 | WP_000917733.1 | hypothetical protein | - |
| CR916_RS13880 () | 2352986..2353675 | - | 690 | WP_096851746.1 | antiterminator | - |
| CR916_RS13885 () | 2353672..2354031 | - | 360 | WP_096851745.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CR916_RS13890 () | 2354044..2355093 | - | 1050 | WP_001265156.1 | DUF968 domain-containing protein | - |
| CR916_RS13895 () | 2355095..2355373 | - | 279 | WP_072184779.1 | hypothetical protein | - |
| CR916_RS13900 () | 2355541..2355696 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CR916_RS13910 () | 2355943..2356047 | - | 105 | WP_001278450.1 | hypothetical protein | - |
| CR916_RS13915 () | 2356163..2356240 | - | 78 | Protein_2389 | DUF551 domain-containing protein | - |
| CR916_RS13920 () | 2356871..2357119 | + | 249 | WP_001261939.1 | DinI-like family protein | - |
| CR916_RS13930 () | 2357281..2357922 | - | 642 | WP_001143784.1 | hypothetical protein | VF |
| CR916_RS13935 () | 2358004..2358633 | - | 630 | WP_101975638.1 | hypothetical protein | VF |
| CR916_RS13940 () | 2358706..2359281 | - | 576 | WP_001131657.1 | hypothetical protein | VF |
| CR916_RS13945 () | 2359394..2359663 | - | 270 | WP_001101699.1 | phage tail fiber C-terminal domain-containing protein | - |
| CR916_RS13950 () | 2359665..2360978 | - | 1314 | WP_101974170.1 | ISNCY family transposase KIS | Transposase |
| CR916_RS13955 () | 2361039..2361638 | - | 600 | WP_101974156.1 | Outer membrane protein X | VF |
| CR916_RS13960 () | 2361705..2365181 | - | 3477 | WP_101975637.1 | host specificity protein J | - |
| CR916_RS13965 () | 2365417..2366049 | - | 633 | WP_072065989.1 | tail assembly protein | - |
| CR916_RS13970 () | 2365995..2366738 | - | 744 | WP_101975636.1 | C40 family peptidase | - |
| CR916_RS13975 () | 2366749..2367447 | - | 699 | WP_080025938.1 | phage minor tail protein L | - |
| CR916_RS13980 () | 2367447..2367776 | - | 330 | WP_000847298.1 | phage tail protein | - |
| CR916_RS13985 () | 2367773..2370412 | - | 2640 | Protein_2402 | phage tail tape measure protein | - |
| CR916_RS13990 () | 2370456..2370764 | - | 309 | WP_000532073.1 | phage tail assembly protein T | - |
| CR916_RS13995 () | 2370791..2371213 | - | 423 | WP_000479062.1 | phage minor tail protein G | - |
| CR916_RS14000 () | 2371227..2371979 | - | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| CR916_RS14005 () | 2371987..2372385 | - | 399 | WP_000682716.1 | tail protein | - |
| CR916_RS14010 () | 2372398..2373021 | - | 624 | WP_000974960.1 | phage tail protein | - |
| CR916_RS14015 () | 2373024..2373305 | - | 282 | WP_001281350.1 | DNA breaking-rejoining protein | - |
| CR916_RS14020 () | 2373298..2373624 | - | 327 | WP_001097065.1 | DUF2190 family protein | - |
| CR916_RS30780 () | 2373712..2375726 | - | 2015 | Protein_2410 | ATP-dependent Clp protease proteolytic subunit | VF |
| CR916_RS14030 () | 2375671..2377170 | - | 1500 | Protein_2411 | phage portal protein | - |
| CR916_RS14035 () | 2377170..2377382 | - | 213 | WP_000102415.1 | hypothetical protein | - |
| CR916_RS14040 () | 2377379..2379502 | - | 2124 | WP_001077626.1 | phage terminase large subunit family protein | - |
| CR916_RS14045 () | 2379499..2379975 | - | 477 | WP_000373407.1 | DUF1441 family protein | - |
| CR916_RS30275 () | 2380450..2380635 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| CR916_RS14055 () | 2381154..2381687 | - | 534 | WP_001092902.1 | lysozyme | - |
| CR916_RS14060 () | 2382199..2382990 | - | 792 | WP_001041949.1 | DUF1327 domain-containing protein | - |
| CR916_RS14065 () | 2382994..2383209 | - | 216 | WP_000284518.1 | class II holin family protein | - |
| CR916_RS14070 () | 2383286..2383558 | - | 273 | WP_001290212.1 | DUF826 domain-containing protein | - |
| CR916_RS14075 () | 2383599..2383778 | - | 180 | WP_000143464.1 | DUF1378 family protein | - |
| CR916_RS14080 () | 2383913..2385853 | - | 1941 | Protein_2421 | DUF1737 domain-containing protein | - |
| CR916_RS14085 () | 2386448..2387506 | - | 1059 | WP_000483509.1 | site-specific DNA-methyltransferase | - |
| CR916_RS14090 () | 2387658..2387855 | - | 198 | WP_000917733.1 | hypothetical protein | - |
| CR916_RS14095 () | 2388082..2388903 | - | 822 | WP_000762902.1 | antitermination protein | - |
| CR916_RS14100 () | 2388900..2389274 | - | 375 | WP_000904171.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CR916_RS14105 () | 2389287..2390336 | - | 1050 | WP_001265189.1 | DUF968 domain-containing protein | - |
| CR916_RS14110 () | 2390338..2390607 | - | 270 | WP_024177817.1 | hypothetical protein | - |
| CR916_RS14115 () | 2390661..2390888 | - | 228 | WP_001452497.1 | hypothetical protein | - |
| CR916_RS14120 () | 2391112..2391483 | + | 372 | WP_001217944.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CR916_RS14125 () | 2391476..2391793 | + | 318 | WP_000042395.1 | DNA-binding transcriptional regulator | - |
| CR916_RS14130 () | 2391896..2392051 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CR916_RS14140 () | 2392323..2392871 | - | 549 | WP_000211435.1 | ORF6N domain-containing protein | - |
| CR916_RS14150 () | 2393219..2393404 | - | 186 | WP_000215514.1 | hypothetical protein | - |
| CR916_RS14155 () | 2393464..2394222 | - | 759 | WP_096851718.1 | DUF1627 domain-containing protein | - |
| CR916_RS14160 () | 2394257..2394799 | - | 543 | WP_157837342.1 | replication protein | - |
| CR916_RS30290 () | 2394711..2395751 | - | 1041 | WP_000020565.1 | DNA-binding protein | - |
| CR916_RS14165 () | 2395723..2396274 | - | 552 | WP_000705370.1 | hypothetical protein | - |
| CR916_RS14170 () | 2396258..2396485 | - | 228 | WP_000476986.1 | transcriptional regulator | - |
| CR916_RS14175 () | 2396563..2396970 | + | 408 | WP_001003379.1 | helix-turn-helix domain-containing protein | - |
| CR916_RS14180 () | 2397160..2397315 | + | 156 | WP_000379589.1 | DUF1391 family protein | - |
| CR916_RS14190 () | 2397475..2397693 | + | 219 | WP_001171938.1 | hypothetical protein | - |
| CR916_RS14205 () | 2398259..2398447 | + | 189 | WP_000450222.1 | cell division inhibitor | - |
| CR916_RS14210 () | 2398444..2398632 | + | 189 | WP_000092782.1 | DUF1482 family protein | - |
| CR916_RS14215 () | 2398725..2401169 | + | 2445 | WP_000102168.1 | exonuclease | - |
| CR916_RS14220 () | 2401234..2401482 | + | 249 | WP_000113189.1 | excisionase | - |
| CR916_RS14225 () | 2401460..2402590 | + | 1131 | WP_000113671.1 | hypothetical protein ; Integrase | Integrase |
| CR916_RS14230 () | 2402636..2402761 | - | 126 | Protein_2447 | outer membrane protein OmpW | - |
| CR916_RS14240 () | 2403495..2403730 | - | 236 | Protein_2448 | IS3 family transposase | - |
| CR916_RS30785 () | 2403901..2404551 | - | 651 | WP_169301324.1 | hypothetical protein | VF |
| CR916_RS14250 () | 2404783..2405844 | + | 1062 | Protein_2450 | IS630 family transposase | - |
| CR916_RS14255 () | 2406063..2406653 | - | 591 | WP_001144877.1 | hypothetical protein | VF |
| CR916_RS14260 () | 2406837..2407484 | + | 648 | WP_001303944.1 | hypothetical protein | VF |
| CR916_RS14265 () | 2407621..2407767 | - | 147 | WP_001414184.1 | hypothetical protein | - |
| CR916_RS14270 () | 2408195..2408473 | + | 279 | WP_001303943.1 | hypothetical protein | - |
| CR916_RS14275 () | 2408959..2409593 | + | 635 | Protein_2455 | IS256 family transposase ISEic2 | Transposase |
| CR916_RS14280 () | 2409640..2410209 | - | 570 | WP_000938103.1 | Effector protein NleF | VF |
| CR916_RS14285 () | 2410275..2410676 | - | 402 | Protein_2457 | type III secretion system effector kinase NleH1-2 | - |
| CR916_RS14290 () | 2410735..2411429 | + | 695 | WP_085949012.1 | IS1 family transposase IS1N | Transposase |
| CR916_RS30790 () | 2411450..2411548 | - | 99 | Protein_2459 | hypothetical protein | VF |
| CR916_RS14295 () | 2411543..2412676 | - | 1134 | Protein_2460 | hypothetical protein | VF |
| CR916_RS14300 () | 2412726..2413073 | - | 348 | WP_000612594.1 | IS66 family transposase ISEc8 | Transposase |
| CR916_RS14305 () | 2413070..2413450 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| CR916_RS14310 () | 2413542..2414126 | - | 585 | Protein_2463 | Zn-dependent oxidoreductase | - |
| CR916_RS14315 () | 2414138..2415352 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| CR916_RS14325 () | 2415558..2415884 | - | 327 | WP_001364742.1 | YnfA family protein | - |
| CR916_RS14330 () | 2416019..2416360 | + | 342 | WP_000705197.1 | DUF1283 family protein | - |
| CR916_RS14335 () | 2416395..2416955 | + | 561 | WP_062881710.1 | spermidine N1-acetyltransferase | - |
| CR916_RS14340 () | 2416958..2417668 | - | 711 | WP_074433968.1 | YnfC family lipoprotein | - |
| CR916_RS14345 () | 2417776..2418081 | + | 306 | WP_062881712.1 | DUF1161 domain-containing protein | - |
| CR916_RS14350 () | 2418280..2420706 | + | 2427 | Protein_2470 | dimethyl sulfoxide reductase subunit A | - |
| CR916_RS14355 () | 2420767..2423190 | + | 2424 | WP_096851557.1 | dimethyl sulfoxide reductase subunit A | - |
| CR916_RS14360 () | 2423201..2423818 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| CR916_RS14365 () | 2423820..2424674 | + | 855 | WP_000526488.1 | dimethyl sulfoxide reductase anchor subunit | - |
| CR916_RS14370 () | 2424717..2425331 | + | 615 | WP_062881713.1 | Tat proofreading chaperone DmsD | - |
| CR916_RS14375 () | 2425490..2426782 | + | 1293 | Protein_2475 | voltage-gated ClC-type chloride channel ClcB | - |
| CR916_RS14380 () | 2426735..2427430 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| CR916_RS14385 () | 2427555..2428775 | - | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|