MGE detailed information
MGE type: Prophage MGE length: 42780 bp
Accession: NZ_CP024618 Location: 2071913..2114692 Organism: Escherichia coli strain SMN152SH1 Replicon: chromosome
Accession: NZ_CP024618 Location: 2071913..2114692 Organism: Escherichia coli strain SMN152SH1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR916_RS30895 () | 2067901..2067948 | + | 48 | WP_211180494.1 | protein YnaN | - |
| CR916_RS12325 () | 2067962..2068945 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| CR916_RS12330 () | 2069221..2069394 | + | 174 | WP_001296046.1 | hypothetical protein | - |
| CR916_RS12335 () | 2069424..2070797 | + | 1374 | WP_024226008.1 | ATP-dependent RNA helicase DbpA | - |
| CR916_RS12340 () | 2070926..2071861 | - | 936 | WP_096851542.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| CR916_RS12345 () | 2071913..2073148 | - | 1236 | WP_096851543.1 | Putative defective protein IntQ ; Integrase | Integrase |
| CR916_RS12350 () | 2073150..2073365 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| CR916_RS12355 () | 2073465..2073653 | - | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 2073469..2073647 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2073469..2073647 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2073469..2073647 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2073469..2073647 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| CR916_RS12360 () | 2073646..2073840 | - | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| CR916_RS12365 () | 2073897..2074706 | - | 810 | WP_000166315.1 | recombination protein RecT | - |
| CR916_RS12370 () | 2074699..2077368 | - | 2670 | WP_000102194.1 | exodeoxyribonuclease VIII | - |
| CR916_RS12375 () | 2077449..2077625 | - | 177 | WP_000245534.1 | hypothetical protein | - |
| CR916_RS12380 () | 2077619..2077840 | - | 222 | WP_000560226.1 | killing protein KilR | - |
| CR916_RS12385 () | 2077887..2078735 | - | 849 | WP_000887681.1 | Rha family phage regulatory protein | - |
| CR916_RS12390 () | 2079147..2079299 | - | 153 | WP_000379547.1 | DUF1391 family protein | - |
| CR916_RS12395 () | 2079606..2080025 | - | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| CR916_RS12400 () | 2080122..2080364 | + | 243 | WP_001033914.1 | helix-turn-helix domain-containing protein | - |
| CR916_RS12405 () | 2080361..2080783 | + | 423 | WP_000702017.1 | hypothetical protein | - |
| CR916_RS12410 () | 2080861..2081649 | + | 789 | WP_001356605.1 | hypothetical protein | - |
| CR916_RS12415 () | 2081656..2082402 | + | 747 | WP_000788984.1 | ATP-binding protein | - |
| CR916_RS12420 () | 2082425..2083186 | + | 762 | WP_000450718.1 | DUF1627 domain-containing protein | - |
| CR916_RS12425 () | 2083202..2083624 | + | 423 | WP_001151116.1 | DUF977 family protein | - |
| CR916_RS12430 () | 2083621..2083851 | + | 231 | WP_000014164.1 | hypothetical protein | - |
| CR916_RS12435 () | 2084006..2084656 | + | 651 | WP_001138877.1 | hypothetical protein | - |
| CR916_RS12440 () | 2084643..2085764 | + | 1122 | WP_000418464.1 | hypothetical protein | VF |
| CR916_RS12445 () | 2085944..2086099 | + | 156 | WP_000813269.1 | type I toxin-antitoxin system toxin HokD | - |
| CR916_RS12460 () | 2086659..2087258 | + | 600 | WP_000940305.1 | DUF1367 family protein | - |
| CR916_RS12465 () | 2087258..2087548 | + | 291 | WP_000228017.1 | DUF1364 domain-containing protein | - |
| CR916_RS12470 () | 2087545..2088087 | + | 543 | WP_000640110.1 | DUF1133 family protein | - |
| CR916_RS12475 () | 2088789..2090735 | + | 1947 | WP_101975647.1 | DUF1737 domain-containing protein | - |
| CR916_RS12480 () | 2090872..2091051 | + | 180 | WP_000143458.1 | DUF1378 family protein | - |
| CR916_RS12485 () | 2091092..2091337 | + | 246 | WP_001290230.1 | DUF826 domain-containing protein | - |
| CR916_RS12490 () | 2091415..2091630 | + | 216 | WP_001072899.1 | class II holin family protein | - |
| CR916_RS12495 () | 2091635..2092168 | + | 534 | WP_000087728.1 | lysozyme | - |
| CR916_RS12500 () | 2092439..2093008 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| CR916_RS30200 () | 2093008..2093154 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| CR916_RS30210 () | 2093382..2093567 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| CR916_RS12510 () | 2093779..2094051 | - | 273 | WP_001302882.1 | hypothetical protein | - |
| CR916_RS12515 () | 2094084..2094560 | + | 477 | WP_000348565.1 | DUF1441 family protein | - |
| CR916_RS12520 () | 2094557..2096680 | + | 2124 | WP_001077625.1 | phage terminase large subunit family protein | - |
| CR916_RS12525 () | 2096677..2096889 | + | 213 | WP_000102415.1 | hypothetical protein | - |
| CR916_RS12530 () | 2096889..2098391 | + | 1503 | WP_000974564.1 | phage portal protein | - |
| CR916_RS12535 () | 2098336..2100360 | + | 2025 | WP_001114429.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| CR916_RS12540 () | 2100448..2100774 | + | 327 | WP_001097065.1 | DUF2190 family protein | - |
| CR916_RS12545 () | 2100767..2101048 | + | 282 | WP_001281347.1 | DNA breaking-rejoining protein | - |
| CR916_RS12550 () | 2101051..2101674 | + | 624 | WP_001450644.1 | phage tail protein | - |
| CR916_RS12555 () | 2101687..2102085 | + | 399 | WP_000682716.1 | tail protein | - |
| CR916_RS12560 () | 2102093..2102845 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| CR916_RS12565 () | 2102859..2103281 | + | 423 | WP_044707580.1 | phage minor tail protein G | - |
| CR916_RS12570 () | 2103308..2103616 | + | 309 | WP_000532075.1 | phage tail assembly protein T | - |
| CR916_RS12575 () | 2103660..2106305 | + | 2646 | WP_001303163.1 | phage tail tape measure protein | - |
| CR916_RS12580 () | 2106302..2106631 | + | 330 | WP_000847298.1 | phage tail protein | - |
| CR916_RS12585 () | 2106631..2107329 | + | 699 | WP_096851779.1 | phage minor tail protein L | - |
| CR916_RS12590 () | 2107335..2108078 | + | 744 | WP_053903785.1 | C40 family peptidase | - |
| CR916_RS12595 () | 2108024..2108653 | + | 630 | WP_096851774.1 | tail assembly protein | - |
| CR916_RS12600 () | 2108894..2112367 | + | 3474 | WP_101975646.1 | host specificity protein J | - |
| CR916_RS12605 () | 2112435..2113034 | + | 600 | WP_001228289.1 | Outer membrane protein X | VF |
| CR916_RS12610 () | 2113099..2114421 | + | 1323 | WP_000279065.1 | ISNCY family transposase KIS | Transposase |
| CR916_RS12615 () | 2114423..2114692 | + | 270 | WP_001023406.1 | phage tail fiber C-terminal domain-containing protein | - |
| CR916_RS12620 () | 2114805..2115380 | + | 576 | WP_001131659.1 | DUF1076 domain-containing protein | - |
| CR916_RS12625 () | 2115453..2116082 | + | 630 | WP_001443810.1 | DUF1076 domain-containing protein | - |
| CR916_RS12630 () | 2116164..2116805 | + | 642 | WP_001143784.1 | DUF1076 domain-containing protein | - |
| CR916_RS12635 () | 2117386..2117820 | - | 435 | WP_001364706.1 | universal stress protein UspF | - |
| CR916_RS12640 () | 2117961..2119094 | - | 1134 | Protein_2152 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|