MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 88896 bp
Accession: NZ_CP024617 Location: 1..88896 Organism: Escherichia coli strain SMN152SH1 Replicon: plasmid pO177A1
Accession: NZ_CP024617 Location: 1..88896 Organism: Escherichia coli strain SMN152SH1 Replicon: plasmid pO177A1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR916_RS30555 () | 2..148 | - | 147 | Protein_1 | phage tail protein | - |
| CR916_RS00395 () | 228..431 | - | 204 | WP_010917875.1 | tail fiber protein | - |
| CR916_RS00405 () | 653..1213 | + | 561 | WP_000904930.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| CR916_RS00410 () | 1313..1786 | + | 474 | Protein_4 | sialate O-acetylesterase | - |
| CR916_RS00415 () | 1791..2051 | - | 261 | Protein_5 | hypothetical protein | - |
| CR916_RS00420 () | 2140..3177 | + | 1038 | WP_000543828.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| CR916_RS00425 () | 3311..3502 | + | 192 | Protein_7 | envelope stress response protein PspG | - |
| CR916_RS00430 () | 3631..4368 | - | 738 | WP_000528254.1 | hypothetical protein | - |
| CR916_RS00435 () | 4322..4522 | - | 201 | WP_001444515.1 | Com family DNA-binding transcriptional regulator | - |
| CR916_RS29945 () | 4637..5098 | + | 462 | Protein_10 | hypothetical protein | - |
| CR916_RS00445 () | 5137..5382 | - | 246 | WP_001114107.1 | DUF826 domain-containing protein | - |
| CR916_RS00455 () | 6225..6371 | - | 147 | WP_096851742.1 | DUF1378 family protein | - |
| CR916_RS00460 () | 6429..8003 | - | 1575 | Protein_14 | sialate O-acetylesterase | - |
| CR916_RS00465 () | 8001..8741 | + | 741 | Protein_15 | site-specific integrase | - |
| CR916_RS00470 () | 8909..9148 | + | 240 | Protein_16 | transposase | - |
| CR916_RS00475 () | 9185..10722 | - | 1538 | Protein_17 | IS66 family transposase ISEc8 | Transposase |
| CR916_RS00480 () | 10772..11117 | - | 346 | Protein_18 | IS66 family transposase ISEc8 | Transposase |
| CR916_RS00485 () | 11114..11494 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| CR916_RS00490 () | 11754..12101 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| CR916_RS00495 () | 12151..13688 | + | 1538 | Protein_21 | IS66 family transposase ISEc8 | Transposase |
| CR916_RS00500 () | 14131..18033 | + | 3903 | WP_062881749.1 | Serine protease EspP | VF |
| CR916_RS00505 () | 18338..18529 | + | 192 | WP_000789660.1 | hypothetical protein | - |
| CR916_RS00510 () | 18540..18905 | + | 366 | WP_032205206.1 | hypothetical protein | - |
| CR916_RS00515 () | 19139..19519 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| CR916_RS00520 () | 19516..19863 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| CR916_RS00525 () | 19913..21449 | + | 1537 | Protein_27 | IS66 family transposase ISEc8 | Transposase |
| CR916_RS00530 () | 21507..21920 | + | 414 | WP_062882354.1 | hypothetical protein | - |
| CR916_RS00535 () | 21922..22705 | + | 784 | Protein_29 | site-specific integrase | - |
| CR916_RS00540 () | 22877..23230 | + | 354 | WP_000864811.1 | colicin M immunity protein | - |
| CR916_RS29950 () | 23280..23441 | - | 162 | Protein_31 | lipid II-degrading bacteriocin | - |
| CR916_RS00550 () | 23633..25072 | - | 1440 | WP_032204690.1 | Hemolysin secretion protein D, chromosomal | VF |
| CR916_RS00555 () | 25076..27196 | - | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| CR916_RS00560 () | 27246..30242 | - | 2997 | WP_062882355.1 | Hemolysin, chromosomal | VF |
| CR916_RS00565 () | 30244..30759 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| CR916_RS29955 () | 31218..33080 | + | 1863 | Protein_36 | type IV conjugative transfer system coupling protein TraD | - |
| CR916_RS00580 () | 33089..33487 | - | 399 | WP_000911317.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| CR916_RS00585 () | 33487..33714 | - | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| CR916_RS00590 () | 33796..39066 | + | 5271 | WP_096851681.1 | Multifunctional conjugation protein TraI | Relaxase |
| CR916_RS00595 () | 39086..39832 | + | 747 | WP_062881715.1 | conjugal transfer pilus acetylase TraX | - |
| CR916_RS00600 () | 39887..40447 | + | 561 | WP_062881716.1 | fertility inhibition protein FinO | - |
| CR916_RS00605 () | 40583..40795 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| CR916_RS30560 () | 41041..41115 | + | 75 | Protein_43 | endonuclease | - |
| - () | 41371..41432 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 41371..41432 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 41371..41432 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 41371..41432 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| CR916_RS00615 () | 41419..41625 | + | 207 | WP_001351576.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| CR916_RS00620 () | 41909..42166 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| CR916_RS00630 () | 42398..42472 | + | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| CR916_RS00635 () | 42465..42947 | + | 483 | WP_001523473.1 | hypothetical protein | - |
| CR916_RS00640 () | 42940..43797 | + | 858 | WP_096851680.1 | incFII family plasmid replication initiator RepA | - |
| CR916_RS00650 () | 44709..44993 | + | 285 | WP_062881718.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| CR916_RS00655 () | 44993..45268 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CR916_RS00665 () | 46801..52548 | - | 5748 | WP_197733157.1 | DUF3491 domain-containing protein | - |
| CR916_RS30565 () | 53542..55746 | - | 2205 | Protein_53 | glycosyl transferase | - |
| CR916_RS00675 () | 56048..56266 | - | 219 | Protein_54 | transposase | - |
| CR916_RS00680 () | 56368..57397 | + | 1030 | Protein_55 | IS630 family transposase | - |
| CR916_RS00685 () | 57422..57804 | - | 383 | Protein_56 | IS200-IS605 family transposase ISEc46 | Transposase |
| CR916_RS29960 () | 57886..57939 | - | 54 | WP_106879220.1 | helix-turn-helix domain-containing protein | - |
| CR916_RS00690 () | 58394..58567 | + | 174 | Protein_58 | IS3 family transposase ISEc17 | Transposase |
| CR916_RS00700 () | 59998..62208 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| CR916_RS00705 () | 62252..62641 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| CR916_RS00710 () | 62750..63644 | + | 895 | Protein_62 | IS3 family transposase IS1203 | Transposase |
| CR916_RS30570 () | 63598..64063 | + | 466 | Protein_63 | Transcriptional repressor MprA | VF |
| CR916_RS00730 () | 64195..64412 | + | 218 | Protein_64 | serine/threonine protein kinase | - |
| CR916_RS00735 () | 64536..65276 | + | 741 | WP_062882567.1 | tyrosine-type recombinase/integrase | - |
| CR916_RS00740 () | 65561..66538 | - | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| CR916_RS00755 () | 67323..68536 | + | 1214 | WP_199770264.1 | IS3 family transposase IS629 | Transposase |
| CR916_RS00760 () | 69186..70352 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| CR916_RS00765 () | 70352..71323 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| CR916_RS00775 () | 71975..72877 | + | 903 | WP_096851684.1 | DUF1281 domain-containing protein | - |
| CR916_RS00780 () | 72881..73186 | + | 306 | WP_062881562.1 | hypothetical protein | - |
| CR916_RS00785 () | 73263..73946 | + | 684 | WP_000085939.1 | DNA methylase | - |
| CR916_RS00795 () | 74056..74615 | + | 560 | Protein_73 | DUF1380 family protein | - |
| CR916_RS00800 () | 74661..75407 | + | 747 | Protein_74 | hypothetical protein | - |
| CR916_RS00805 () | 75735..76037 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| CR916_RS00810 () | 76084..76506 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| CR916_RS00815 () | 76503..76694 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| CR916_RS30575 () | 77257..77415 | + | 159 | WP_062881566.1 | hypothetical protein | - |
| CR916_RS00835 () | 77440..77727 | + | 288 | WP_062881567.1 | hypothetical protein | - |
| CR916_RS00840 () | 77846..78145 | + | 300 | Protein_80 | DUF932 domain-containing protein | - |
| CR916_RS00845 () | 78138..79529 | + | 1392 | WP_074433935.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CR916_RS00850 () | 79556..79813 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| CR916_RS00855 () | 79806..80549 | + | 744 | WP_062881569.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CR916_RS00860 () | 80565..80912 | + | 348 | WP_001287908.1 | conjugal transfer protein TrbA | - |
| CR916_RS00870 () | 81270..81554 | + | 285 | WP_062881570.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CR916_RS00875 () | 81541..82086 | + | 546 | WP_000059833.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CR916_RS00880 () | 82016..82357 | + | 342 | WP_074433933.1 | P-type conjugative transfer protein TrbJ | - |
| CR916_RS00885 () | 82311..82736 | + | 426 | WP_074433934.1 | F-type conjugal transfer protein TrbF | - |
| CR916_RS00890 () | 82723..84096 | + | 1374 | WP_062881573.1 | conjugal transfer protein TraH | - |
| CR916_RS00895 () | 84093..86870 | + | 2778 | WP_096851683.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CR916_RS00905 () | 88112..88555 | + | 444 | Protein_92 | conjugal transfer entry exclusion protein TraS | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|