MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP024479 Location: 2742724..2752075 Organism: Escherichia coli strain 2011C-4315 Replicon: chromosome
Accession: NZ_CP024479 Location: 2742724..2752075 Organism: Escherichia coli strain 2011C-4315 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A5958_RS14950 () | 2738353..2738838 | + | 486 | WP_000849570.1 | antirestriction protein | - |
| A5958_RS14955 () | 2738854..2739330 | + | 477 | WP_001186727.1 | RadC family protein | - |
| A5958_RS14960 () | 2739393..2739614 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| A5958_RS14965 () | 2739777..2740145 | + | 369 | WP_001339471.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| A5958_RS14970 () | 2740235..2740612 | + | 378 | WP_000854748.1 | TA system toxin CbtA family protein | - |
| A5958_RS14975 () | 2740609..2741097 | + | 489 | WP_000761721.1 | hypothetical protein | - |
| A5958_RS14980 () | 2741109..2741306 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| A5958_RS14985 () | 2741403..2741975 | + | 573 | WP_001290246.1 | DUF4942 domain-containing protein | - |
| A5958_RS14995 () | 2742724..2744262 | + | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| A5958_RS15005 () | 2744628..2745962 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| A5958_RS15010 () | 2746042..2748189 | + | 2148 | WP_064460404.1 | lysine decarboxylase CadA | - |
| A5958_RS15015 () | 2748248..2749705 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| A5958_RS15020 () | 2749942..2751459 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| A5958_RS15025 () | 2751578..2751751 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| A5958_RS15030 () | 2751779..2752075 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| A5958_RS15040 () | 2752302..2752574 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| A5958_RS15045 () | 2752586..2752816 | - | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| A5958_RS15050 () | 2752997..2754628 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| A5958_RS15055 () | 2754625..2755344 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |