MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 21799 bp
Accession: NZ_CP024479 Location: 1271976..1293774 Organism: Escherichia coli strain 2011C-4315 Replicon: chromosome
Accession: NZ_CP024479 Location: 1271976..1293774 Organism: Escherichia coli strain 2011C-4315 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A5958_RS07350 () | 1267202..1267915 | - | 714 | WP_000261909.1 | helix-turn-helix domain-containing protein | - |
| A5958_RS07355 () | 1268053..1268250 | - | 198 | WP_000917737.1 | hypothetical protein | - |
| A5958_RS07360 () | 1268537..1269355 | - | 819 | WP_000265267.1 | CPBP family intramembrane metalloprotease | - |
| A5958_RS07365 () | 1269507..1269878 | - | 372 | WP_000090265.1 | antitermination protein | - |
| A5958_RS07370 () | 1269868..1270239 | - | 372 | WP_001217436.1 | RusA family crossover junction endodeoxyribonuclease | - |
| A5958_RS07375 () | 1270252..1271301 | - | 1050 | WP_001265133.1 | DUF968 domain-containing protein | - |
| A5958_RS07380 () | 1271303..1271581 | - | 279 | WP_001341388.1 | hypothetical protein | - |
| A5958_RS07385 () | 1271749..1271904 | - | 156 | WP_000813263.1 | type I toxin-antitoxin system toxin HokD | - |
| A5958_RS07395 () | 1271976..1273049 | + | 1074 | WP_001178384.1 | IS481 family transposase ISKpn28 | Transposase |
| A5958_RS07400 () | 1273610..1274383 | + | 774 | WP_000160654.1 | alpha/beta hydrolase | - |
| A5958_RS07405 () | 1274735..1275148 | - | 414 | WP_001151233.1 | DUF977 family protein | - |
| A5958_RS07410 () | 1275164..1275934 | - | 771 | WP_000450992.1 | DUF1627 domain-containing protein | - |
| A5958_RS07415 () | 1276016..1276702 | - | 687 | WP_000788749.1 | ATP-binding protein | - |
| A5958_RS07420 () | 1276709..1277824 | - | 1116 | WP_001205820.1 | hypothetical protein | - |
| A5958_RS07425 () | 1277903..1278358 | + | 456 | WP_000273724.1 | hypothetical protein | - |
| A5958_RS07430 () | 1278565..1278990 | - | 426 | WP_000693855.1 | Rha family transcriptional regulator | - |
| A5958_RS07435 () | 1278974..1279246 | - | 273 | WP_000887453.1 | helix-turn-helix domain-containing protein | - |
| A5958_RS07440 () | 1279355..1279756 | + | 402 | WP_000986592.1 | helix-turn-helix domain-containing protein | - |
| A5958_RS07445 () | 1279784..1279975 | + | 192 | WP_000536233.1 | hypothetical protein | Antitoxin Detail |
| A5958_RS07450 () | 1279975..1280262 | + | 288 | WP_001303876.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A5958_RS07455 () | 1280539..1280694 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| A5958_RS07465 () | 1280836..1281225 | + | 390 | WP_000394513.1 | hypothetical protein | - |
| A5958_RS07470 () | 1281412..1281597 | - | 186 | WP_001133046.1 | hypothetical protein | - |
| A5958_RS07480 () | 1282171..1282359 | + | 189 | WP_000413705.1 | cell division inhibition protein DicB | - |
| A5958_RS07485 () | 1282356..1282547 | + | 192 | WP_001098307.1 | DUF1482 family protein | - |
| A5958_RS07490 () | 1282641..1285112 | + | 2472 | WP_000034468.1 | exonuclease | - |
| A5958_RS07495 () | 1285180..1285422 | + | 243 | WP_000273151.1 | DUF4224 domain-containing protein | - |
| A5958_RS07500 () | 1285400..1286419 | + | 1020 | WP_001299351.1 | hypothetical protein ; Integrase | Integrase |
| A5958_RS07505 () | 1286827..1287486 | + | 660 | WP_000375136.1 | FtsH protease modulator YccA | - |
| A5958_RS07510 () | 1287577..1287906 | + | 330 | WP_000904444.1 | sulfurtransferase TusE | - |
| A5958_RS07515 () | 1287903..1288181 | - | 279 | WP_000048255.1 | acylphosphatase | - |
| A5958_RS07520 () | 1288276..1289466 | + | 1191 | WP_000116292.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
| A5958_RS07525 () | 1289524..1289841 | + | 318 | WP_001295356.1 | heat shock protein HspQ | - |
| A5958_RS07530 () | 1289886..1290299 | - | 414 | WP_000665217.1 | CoA-binding protein | - |
| A5958_RS07535 () | 1290472..1291134 | + | 663 | WP_000847791.1 | DUF2057 family protein | - |
| A5958_RS07540 () | 1291230..1291688 | + | 459 | WP_000424181.1 | methylglyoxal synthase | - |
| A5958_RS07545 () | 1291720..1293774 | - | 2055 | WP_000420533.1 | DNA helicase IV | - |
| A5958_RS07550 () | 1293897..1294343 | + | 447 | WP_001261231.1 | YccF domain-containing protein | - |
| A5958_RS07555 () | 1294353..1296515 | + | 2163 | WP_000875044.1 | TIGR01666 family membrane protein | - |
| A5958_RS07560 () | 1296478..1297107 | - | 630 | WP_000839153.1 | CRP-S regulon transcriptional coactivator Sxy | - |
| A5958_RS07565 () | 1297326..1297835 | + | 510 | WP_000288710.1 | cell division inhibitor SulA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|