MGE detailed information
MGE type: Prophage MGE length: 20897 bp
Accession: NZ_CP024477 Location: 4889821..4910717 Organism: Pseudomonas aeruginosa strain 12939 Replicon: chromosome
Accession: NZ_CP024477 Location: 4889821..4910717 Organism: Pseudomonas aeruginosa strain 12939 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CS058_RS23330 () | 4885180..4885452 | + | 273 | WP_003134390.1 | cysteine-rich CWC family protein | - |
| CS058_RS23335 () | 4885452..4886144 | + | 693 | WP_031636580.1 | 16S rRNA pseudouridine(516) synthase | - |
| CS058_RS23340 () | 4886280..4887323 | + | 1044 | WP_003110811.1 | L,D-transpeptidase | - |
| CS058_RS23345 () | 4887403..4888140 | + | 738 | WP_003085453.1 | murein L,D-transpeptidase catalytic domain family protein | - |
| CS058_RS23350 () | 4888592..4889494 | + | 903 | WP_034024280.1 | (R)-3-hydroxydecanoyl-ACP:CoA transacylase | - |
| CS058_RS23360 () | 4889821..4890168 | - | 348 | WP_003114156.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CS058_RS23365 () | 4890178..4890429 | - | 252 | WP_099887668.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CS058_RS23370 () | 4890643..4891626 | - | 984 | WP_034024252.1 | IS91 family transposase ISCARN110 | Transposase |
| CS058_RS23375 () | 4891626..4892918 | - | 1293 | WP_023088869.1 | hypothetical protein | - |
| CS058_RS23380 () | 4893148..4894422 | - | 1275 | WP_099887670.1 | Zona occludens toxin | VF |
| CS058_RS23385 () | 4894426..4894782 | - | 357 | WP_003114150.1 | DUF2523 domain-containing protein | - |
| CS058_RS23390 () | 4894787..4896067 | - | 1281 | WP_099887672.1 | attachment protein | - |
| CS058_RS23395 () | 4896215..4896463 | - | 249 | WP_003125072.1 | phage coat protein B | - |
| CS058_RS23400 () | 4896476..4896727 | - | 252 | WP_003115979.1 | hypothetical protein | - |
| CS058_RS23410 () | 4896849..4897283 | - | 435 | WP_023087663.1 | hypothetical protein | - |
| CS058_RS23420 () | 4897799..4898089 | - | 291 | WP_059309616.1 | DUF5447 family protein | - |
| CS058_RS23425 () | 4898093..4898305 | - | 213 | WP_031636588.1 | hypothetical protein | - |
| CS058_RS23430 () | 4898307..4898522 | - | 216 | WP_003159564.1 | hypothetical protein | - |
| CS058_RS23435 () | 4898624..4899046 | + | 423 | WP_078463557.1 | Arc family DNA-binding protein | - |
| CS058_RS31810 () | 4899119..4899811 | + | 693 | WP_023129115.1 | hypothetical protein | - |
| CS058_RS23440 () | 4900094..4900453 | - | 360 | WP_058142834.1 | hypothetical protein | - |
| CS058_RS23445 () | 4900944..4901246 | - | 303 | WP_003110810.1 | hypothetical protein | - |
| CS058_RS23450 () | 4901654..4901947 | - | 294 | WP_003141121.1 | DUF2845 domain-containing protein | - |
| CS058_RS23455 () | 4902287..4902544 | + | 258 | WP_003085431.1 | YjhX family toxin | - |
| CS058_RS23460 () | 4902604..4903110 | + | 507 | WP_034026223.1 | N-acetyltransferase | - |
| CS058_RS23465 () | 4903154..4903549 | - | 396 | WP_034026222.1 | lactoylglutathione lyase | - |
| CS058_RS23470 () | 4903594..4903890 | - | 297 | WP_003085421.1 | antibiotic biosynthesis monooxygenase | - |
| CS058_RS23475 () | 4904006..4904860 | + | 855 | WP_034026221.1 | LysR family transcriptional regulator | - |
| CS058_RS23480 () | 4905146..4905925 | + | 780 | WP_023092205.1 | EAL domain-containing protein | - |
| CS058_RS23485 () | 4906018..4906656 | + | 639 | WP_034026220.1 | Chloramphenicol acetyltransferase | VF |
| CS058_RS23490 () | 4906918..4907808 | + | 891 | WP_034026219.1 | Putative glycosyltransferase EpsE | VF |
| CS058_RS23495 () | 4907936..4909330 | + | 1395 | WP_034026218.1 | amidase | - |
| CS058_RS23500 () | 4909401..4910717 | + | 1317 | WP_034026217.1 | MFS transporter | - |
| CS058_RS23505 () | 4910796..4911062 | + | 267 | Protein_4558 | sterol desaturase family protein | - |
| CS058_RS23510 () | 4911117..4912103 | - | 987 | WP_021264203.1 | LysR family transcriptional regulator | - |
| CS058_RS23515 () | 4912113..4912538 | - | 426 | WP_003110838.1 | hypothetical protein | - |
| CS058_RS23520 () | 4912538..4913482 | - | 945 | WP_023127240.1 | peptidylprolyl isomerase | - |
| CS058_RS23525 () | 4913487..4913966 | - | 480 | WP_034026216.1 | YbjN domain-containing protein | - |
| CS058_RS23530 () | 4913995..4914657 | - | 663 | WP_003085372.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|