MGE detailed information
MGE type: IScluster/Tn MGE length: 35183 bp
Accession: NZ_CP024476 Location: 183883..219065 Organism: Shigella flexneri 7b strain 94-3007 Replicon: plasmid unnamed3
Accession: NZ_CP024476 Location: 183883..219065 Organism: Shigella flexneri 7b strain 94-3007 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPZ98_RS25450 | 179422..179658 | + | 237 | WP_000588813.1 | phosphopantetheine-binding protein | - |
| CPZ98_RS25455 | 179875..180804 | + | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| CPZ98_RS25460 | 181751..182530 | - | 780 | WP_005059304.1 | type III secretion system effector cysteine protease IpaJ | - |
| CPZ98_RS26730 | 182720..183536 | - | 817 | Protein_219 | IS110 family transposase | - |
| CPZ98_RS25465 | 183883..184887 | + | 1005 | WP_000255980.1 | IS21 family transposase IS100kyp | Transposase |
| CPZ98_RS25470 | 185079..186275 | + | 1197 | WP_134797091.1 | IS110 family transposase ISSfl4 | Transposase |
| CPZ98_RS25475 | 186325..187162 | - | 838 | Protein_222 | IS21 family transposase ISEc62 | Transposase |
| CPZ98_RS26735 | 187145..187486 | - | 342 | Protein_223 | IS21 family transposase ISEc62 | Transposase |
| CPZ98_RS25480 | 187601..188404 | - | 804 | Protein_224 | IS3 family transposase ISKpn38 | Transposase |
| CPZ98_RS25485 | 188445..189509 | - | 1065 | Protein_225 | IS3 family transposase IS600 | Transposase |
| CPZ98_RS25495 | 189847..191301 | - | 1455 | WP_094169927.1 | hypothetical protein | VF |
| CPZ98_RS25500 | 191873..192547 | + | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| CPZ98_RS25505 | 192544..192894 | + | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| CPZ98_RS25510 | 192891..194492 | + | 1602 | WP_005063916.1 | IS66 family transposase ISSfl3 | Transposase |
| CPZ98_RS26165 | 194746..194910 | - | 165 | WP_001346193.1 | hypothetical protein | - |
| CPZ98_RS25535 | 195812..196096 | + | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| CPZ98_RS25540 | 196084..196569 | + | 486 | WP_000501974.1 | GNAT family N-acetyltransferase | Toxin Detail |
| CPZ98_RS25545 | 196742..197023 | - | 282 | Protein_233 | IS4 family transposase ISSfl1 | Transposase |
| CPZ98_RS25550 | 197090..198246 | + | 1157 | WP_134796931.1 | IS3 family transposase IS600 | Transposase |
| CPZ98_RS25555 | 198360..199003 | + | 644 | Protein_235 | IS3 family transposase IS2 | Transposase |
| CPZ98_RS25565 | 200268..200840 | + | 573 | Protein_237 | IS3 family transposase IS2 | Transposase |
| CPZ98_RS25570 | 200878..201021 | + | 144 | Protein_238 | DUF3440 domain-containing protein | - |
| CPZ98_RS25575 | 201006..201644 | + | 639 | WP_000502862.1 | ParB N-terminal domain-containing protein | - |
| CPZ98_RS25580 | 201872..202296 | + | 425 | Protein_240 | hypothetical protein | - |
| CPZ98_RS25585 | 202291..203487 | - | 1197 | WP_005063228.1 | IS110 family transposase ISSfl4 | Transposase |
| CPZ98_RS25590 | 203738..204211 | + | 474 | WP_005038443.1 | CFA/I fimbrial subunit D | VF |
| CPZ98_RS25595 | 204300..205165 | + | 866 | WP_086020993.1 | IS5 family transposase ISSfl7 | Transposase |
| CPZ98_RS26845 | 205202..205333 | - | 132 | WP_000124143.1 | hypothetical protein | - |
| CPZ98_RS25600 | 205415..205608 | + | 194 | Protein_245 | HNH endonuclease signature motif containing protein | - |
| CPZ98_RS25605 | 205751..205972 | + | 222 | Protein_246 | IS66 family transposase ISCro1 | Transposase |
| CPZ98_RS25610 | 205993..206055 | - | 63 | Protein_247 | IS66 family transposase ISCro1 | Transposase |
| CPZ98_RS25615 | 206505..207917 | + | 1413 | WP_010921643.1 | hypothetical protein | VF |
| CPZ98_RS25620 | 208021..208170 | - | 150 | Protein_249 | IS1 family transposase | - |
| CPZ98_RS25625 | 208246..209943 | + | 1698 | WP_010921642.1 | hypothetical protein | VF |
| CPZ98_RS25635 | 210060..210179 | + | 120 | Protein_251 | IS66 family insertion sequence element accessory protein TnpB | - |
| CPZ98_RS25645 | 210346..210618 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| CPZ98_RS25650 | 210599..211806 | + | 1208 | WP_094096874.1 | IS91 family transposase ISSbo1 | Transposase |
| CPZ98_RS25655 | 212182..212898 | - | 717 | Protein_254 | IS21 family transposase IS100kyp | Transposase |
| CPZ98_RS25665 | 213096..214304 | + | 1209 | Protein_255 | IS3 family transposase | - |
| CPZ98_RS25675 | 214407..214904 | + | 498 | Protein_256 | IS66 family transposase ISEc47 | Transposase |
| CPZ98_RS25680 | 214945..215136 | + | 192 | Protein_257 | IS21 family transposase IS100 | Transposase |
| CPZ98_RS25685 | 215230..215439 | - | 210 | Protein_258 | peptidoglycan-binding protein | - |
| CPZ98_RS25690 | 215489..216853 | - | 1365 | WP_000051932.1 | MFS transporter | - |
| CPZ98_RS25695 | 217051..217326 | - | 276 | WP_228355688.1 | S-type pyocin domain-containing protein | - |
| CPZ98_RS26170 | 217601..217813 | + | 213 | Protein_261 | DDE-type integrase/transposase/recombinase | - |
| CPZ98_RS25705 | 217857..219065 | - | 1209 | Protein_262 | IS3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|