MGE detailed information
MGE type: Conjugative plasmid MGE length: 115922 bp
Accession: NZ_CP024468 Location: 1..115922 Organism: Shigella dysenteriae strain BU53M1 Replicon: plasmid pBU53M1
Accession: NZ_CP024468 Location: 1..115922 Organism: Shigella dysenteriae strain BU53M1 Replicon: plasmid pBU53M1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPZ97_RS24575 () | 364..1572 | + | 1209 | WP_000343717.1 | IS256 family transposase IS1414 | Transposase |
| CPZ97_RS24580 () | 1619..2035 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| CPZ97_RS24585 () | 2028..3008 | - | 981 | WP_000688519.1 | plasmid segregation protein ParM | - |
| CPZ97_RS24590 () | 3422..3730 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| CPZ97_RS24595 () | 3817..4461 | - | 645 | WP_001144036.1 | ParA family protein | - |
| CPZ97_RS24600 () | 4640..5419 | - | 780 | WP_050197978.1 | site-specific integrase | - |
| CPZ97_RS24605 () | 5421..5834 | - | 414 | WP_023210874.1 | hypothetical protein | - |
| CPZ97_RS24610 () | 6403..6660 | + | 258 | WP_001542562.1 | hypothetical protein | - |
| CPZ97_RS24615 () | 6660..7250 | + | 591 | WP_000194574.1 | hypothetical protein | - |
| CPZ97_RS24620 () | 7268..7615 | - | 348 | WP_000142441.1 | hypothetical protein | - |
| CPZ97_RS24625 () | 7744..8091 | + | 348 | WP_050197977.1 | colicin transporter | - |
| CPZ97_RS24630 () | 8085..8782 | - | 698 | Protein_12 | IS1 family transposase | - |
| CPZ97_RS24640 () | 9061..9720 | + | 660 | WP_000412211.1 | Chloramphenicol acetyltransferase | ARG |
| CPZ97_RS24645 () | 9921..10298 | - | 378 | WP_000656305.1 | GNAT family N-acetyltransferase | - |
| CPZ97_RS24650 () | 10365..13331 | - | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| CPZ97_RS24655 () | 13334..13894 | - | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| CPZ97_RS24660 () | 14020..14370 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| CPZ97_RS24670 () | 14573..15586 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| CPZ97_RS24675 () | 15743..16216 | + | 474 | WP_000777555.1 | Dihydrofolate reductase type 1 | ARG |
| CPZ97_RS24680 () | 16309..17100 | + | 792 | WP_001206317.1 | Streptomycin 3''-adenylyltransferase | ARG |
| CPZ97_RS24685 () | 17264..17611 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| CPZ97_RS24690 () | 17605..18444 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| CPZ97_RS24700 () | 18572..19072 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| CPZ97_RS24705 () | 19248..20030 | - | 783 | WP_001163403.1 | IS21 family transposase IS1326 | Transposase |
| CPZ97_RS24710 () | 20020..21543 | - | 1524 | WP_001324342.1 | IS21 family transposase IS1326 | Transposase |
| CPZ97_RS24715 () | 21645..22505 | - | 861 | WP_000344784.1 | TniB family NTP-binding protein | - |
| CPZ97_RS24720 () | 22508..24187 | - | 1680 | WP_171265251.1 | DDE-type integrase/transposase/recombinase | - |
| CPZ97_RS24730 () | 24262..24930 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| CPZ97_RS24735 () | 24966..25202 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| CPZ97_RS24740 () | 25199..25561 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| CPZ97_RS24745 () | 25579..27273 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| CPZ97_RS24750 () | 27325..27747 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| CPZ97_RS24755 () | 27783..28058 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| CPZ97_RS24760 () | 28072..28422 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| CPZ97_RS24765 () | 28494..28928 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| CPZ97_RS24780 () | 29931..30173 | + | 243 | WP_000844627.1 | transposase | - |
| CPZ97_RS24785 () | 30205..30855 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| CPZ97_RS24790 () | 30961..32160 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| CPZ97_RS24795 () | 32192..33052 | - | 861 | WP_000493383.1 | EamA family transporter | - |
| CPZ97_RS24800 () | 33061..33327 | - | 267 | Protein_40 | transposase | - |
| CPZ97_RS24805 () | 33342..34039 | - | 698 | Protein_41 | IS1 family transposase | - |
| CPZ97_RS24810 () | 34094..35647 | - | 1554 | Protein_42 | colicin | - |
| CPZ97_RS24820 () | 35926..37272 | - | 1347 | WP_001132032.1 | hypothetical protein | - |
| CPZ97_RS24830 () | 37625..38227 | + | 603 | WP_001703912.1 | hypothetical protein | - |
| CPZ97_RS24835 () | 38283..38792 | + | 510 | WP_012783913.1 | hypothetical protein | - |
| CPZ97_RS24855 () | 39861..40892 | - | 1032 | WP_050197976.1 | replication initiation protein | - |
| CPZ97_RS24870 () | 41865..42128 | + | 264 | WP_001749178.1 | ash family protein | - |
| CPZ97_RS24875 () | 42046..42333 | + | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| CPZ97_RS24885 () | 42775..43308 | + | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| CPZ97_RS24895 () | 43562..44245 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| CPZ97_RS24900 () | 44372..44791 | + | 420 | WP_072115345.1 | PilI type IV pilus biogenesis protein | - |
| CPZ97_RS24915 () | 45763..46830 | + | 1068 | WP_001360287.1 | hypothetical protein | VF |
| CPZ97_RS24920 () | 46830..47267 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| CPZ97_RS24925 () | 47281..48963 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| CPZ97_RS24930 () | 48956..50251 | + | 1296 | WP_050197975.1 | type 4b pilus protein PilO2 | - |
| CPZ97_RS24935 () | 50238..50690 | + | 453 | WP_001247337.1 | hypothetical protein | VF |
| CPZ97_RS24940 () | 50701..52254 | + | 1554 | WP_032220709.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CPZ97_RS24945 () | 52267..53352 | + | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CPZ97_RS24950 () | 53369..53983 | + | 615 | WP_000908226.1 | hypothetical protein | VF |
| CPZ97_RS24955 () | 53993..54553 | + | 561 | WP_000014005.1 | hypothetical protein | VF |
| CPZ97_RS24960 () | 54538..55194 | + | 657 | WP_001193549.1 | hypothetical protein | VF |
| CPZ97_RS24965 () | 55194..56486 | + | 1293 | WP_134802185.1 | hypothetical protein | VF |
| CPZ97_RS25005 () | 58252..59406 | + | 1155 | WP_001139955.1 | integrase | - |
| CPZ97_RS25010 () | 59557..60381 | + | 825 | WP_001690630.1 | conjugal transfer protein TraE | - |
| CPZ97_RS25015 () | 60467..61669 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| CPZ97_RS25020 () | 61729..62313 | + | 585 | WP_000977525.1 | histidine phosphatase family protein | - |
| CPZ97_RS25025 () | 62708..63166 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| CPZ97_RS25030 () | 63163..63981 | + | 819 | WP_032220737.1 | hypothetical protein | VF |
| CPZ97_RS25035 () | 63978..65126 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| CPZ97_RS25040 () | 65123..65413 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| CPZ97_RS25045 () | 65428..65979 | + | 552 | WP_000014586.1 | Phospholipase D | VF |
| CPZ97_RS25050 () | 66069..69836 | + | 3768 | WP_050197986.1 | DNA primase | - |
| CPZ97_RS25055 () | 69854..70201 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| CPZ97_RS25060 () | 70198..70890 | + | 693 | WP_000138551.1 | DotI/IcmL family type IV secretion protein | - |
| CPZ97_RS25065 () | 70901..71884 | + | 984 | WP_001191880.1 | hypothetical protein | VF |
| CPZ97_RS25070 () | 71887..73176 | + | 1290 | WP_050197985.1 | conjugal transfer protein TraO | - |
| CPZ97_RS25075 () | 73176..73880 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| CPZ97_RS25080 () | 73880..74407 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| CPZ97_RS25085 () | 74458..74862 | + | 405 | WP_025769131.1 | IncI1-type conjugal transfer protein TraR | - |
| CPZ97_RS25090 () | 74926..75114 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| CPZ97_RS25095 () | 75098..75898 | + | 801 | WP_001493813.1 | IncI1-type conjugal transfer protein TraT | - |
| CPZ97_RS25100 () | 75988..79032 | + | 3045 | WP_050197984.1 | IncI1-type conjugal transfer protein TraU | - |
| CPZ97_RS25105 () | 79032..79646 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| CPZ97_RS25110 () | 79613..80815 | + | 1203 | WP_012783938.1 | IncI1-type conjugal transfer protein TraW | - |
| CPZ97_RS25115 () | 80844..81428 | + | 585 | WP_050197983.1 | IncI1-type conjugal transfer protein TraX | - |
| CPZ97_RS25120 () | 81525..83693 | + | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| CPZ97_RS25125 () | 83769..84383 | + | 615 | WP_000578648.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CPZ97_RS25130 () | 84481..84690 | + | 210 | WP_001140543.1 | hemolysin expression modulator Hha | - |
| CPZ97_RS25135 () | 84934..85596 | + | 663 | WP_042078443.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CPZ97_RS25140 () | 85668..85877 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| CPZ97_RS27885 () | 86209..86385 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| CPZ97_RS25145 () | 86450..86746 | - | 297 | WP_011264046.1 | hypothetical protein | - |
| CPZ97_RS25150 () | 87046..87297 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| CPZ97_RS25155 () | 87369..87521 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - () | 87573..87633 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 87573..87633 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 87573..87633 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 87573..87633 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| CPZ97_RS25160 () | 87836..88927 | + | 1092 | WP_000426061.1 | hypothetical protein | - |
| CPZ97_RS25165 () | 89234..90442 | + | 1209 | WP_000121263.1 | hypothetical protein | VF |
| CPZ97_RS25170 () | 90461..91531 | + | 1071 | WP_050197982.1 | IncI1-type conjugal transfer protein TrbB | - |
| CPZ97_RS25175 () | 91524..93815 | + | 2292 | WP_072121498.1 | conjugal transfer protein TrbC | - |
| CPZ97_RS25180 () | 93852..96551 | - | 2700 | WP_069896299.1 | Protein TraI | Relaxase |
| CPZ97_RS25185 () | 96562..96894 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| CPZ97_RS25190 () | 97128..97463 | + | 336 | WP_024227040.1 | hypothetical protein | - |
| CPZ97_RS25195 () | 97549..98397 | - | 849 | WP_024227041.1 | DUF4942 domain-containing protein | - |
| CPZ97_RS25210 () | 98977..99228 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| CPZ97_RS25215 () | 99259..99528 | - | 270 | WP_077778895.1 | hypothetical protein | VF |
| CPZ97_RS25220 () | 99528..100430 | - | 903 | WP_023150544.1 | Recombination-promoting nuclease RpnA | VF |
| CPZ97_RS25225 () | 100427..100816 | - | 390 | WP_000833767.1 | hypothetical protein | - |
| CPZ97_RS25230 () | 100993..101259 | - | 267 | WP_000804663.1 | hypothetical protein | - |
| CPZ97_RS25235 () | 101352..101786 | - | 435 | WP_000218858.1 | hypothetical protein | - |
| CPZ97_RS25250 () | 102515..103015 | - | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| CPZ97_RS25260 () | 103478..104074 | - | 597 | WP_024227064.1 | hypothetical protein | - |
| CPZ97_RS25265 () | 104071..104790 | - | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| CPZ97_RS25270 () | 104787..105221 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| CPZ97_RS25275 () | 105276..107234 | - | 1959 | WP_001145458.1 | ParB/RepB/Spo0J family partition protein | - |
| CPZ97_RS25280 () | 107293..107526 | - | 234 | WP_000006012.1 | DUF905 family protein | - |
| CPZ97_RS25285 () | 107584..108111 | - | 528 | WP_001276114.1 | single-stranded DNA-binding protein | - |
| CPZ97_RS28090 () | 108480..108548 | + | 69 | Protein_116 | pilus protein | - |
| CPZ97_RS25305 () | 108881..109072 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| CPZ97_RS25310 () | 109069..109491 | - | 423 | WP_015058200.1 | DUF1380 family protein | - |
| CPZ97_RS25315 () | 109538..109963 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| CPZ97_RS25325 () | 110381..111157 | - | 777 | WP_015058197.1 | hypothetical protein | - |
| CPZ97_RS25330 () | 111203..111637 | - | 435 | WP_000274500.1 | DUF1380 family protein | - |
| CPZ97_RS25335 () | 111651..111872 | - | 222 | WP_001104879.1 | hypothetical protein | - |
| CPZ97_RS25340 () | 111873..112556 | - | 684 | WP_000086149.1 | DNA methylase | - |
| CPZ97_RS25345 () | 112632..112943 | - | 312 | WP_032260789.1 | hypothetical protein | - |
| CPZ97_RS25350 () | 112940..113842 | - | 903 | WP_077790361.1 | DUF1281 domain-containing protein | - |
| CPZ97_RS25360 () | 114260..114508 | + | 249 | WP_000618111.1 | DinI-like family protein | - |
| CPZ97_RS25365 () | 114505..114942 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|