MGE detailed information
MGE type: Prophage MGE length: 86292 bp
Accession: NZ_CP024466 Location: 881782..968073 Organism: Shigella dysenteriae strain BU53M1 Replicon: chromosome
Accession: NZ_CP024466 Location: 881782..968073 Organism: Shigella dysenteriae strain BU53M1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPZ97_RS04710 () | 877052..877744 | - | 693 | Protein_889 | peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB | - |
| CPZ97_RS04715 () | 877744..878835 | - | 1092 | WP_005020331.1 | pyrimidine utilization protein A | - |
| CPZ97_RS04720 () | 879124..879762 | + | 639 | WP_005020332.1 | HTH-type transcriptional regulator RutR | - |
| CPZ97_RS04725 () | 879802..883764 | - | 3963 | Protein_892 | trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase | - |
| CPZ97_RS26730 () | 883819..884028 | + | 210 | WP_000979516.1 | hypothetical protein | - |
| CPZ97_RS04735 () | 884187..885695 | + | 1509 | WP_001018473.1 | sodium/proline symporter PutP | - |
| CPZ97_RS04740 () | 885844..887173 | - | 1330 | Protein_895 | hypothetical protein | - |
| CPZ97_RS04750 () | 887473..887595 | - | 123 | Protein_896 | IS1 family transposase | - |
| CPZ97_RS04755 () | 887652..888349 | + | 698 | Protein_897 | IS1 family transposase | - |
| CPZ97_RS04760 () | 888366..888943 | - | 578 | Protein_898 | IS1-like element IS1N family transposase | - |
| CPZ97_RS04765 () | 889002..889397 | + | 396 | Protein_899 | HTH-type transcriptional regulator MalT | VF |
| CPZ97_RS04770 () | 889402..889791 | + | 390 | WP_000833289.1 | hypothetical protein | VF |
| CPZ97_RS04775 () | 889816..890232 | + | 417 | WP_001264087.1 | hypothetical protein | VF |
| CPZ97_RS04780 () | 890259..891092 | + | 834 | WP_001189330.1 | hypothetical protein | VF |
| CPZ97_RS04790 () | 891184..891879 | + | 696 | Protein_903 | IS1 family transposase IS1N | Transposase |
| CPZ97_RS04795 () | 891931..892422 | - | 492 | WP_001300785.1 | DUF1097 domain-containing protein | - |
| CPZ97_RS04800 () | 892524..893078 | - | 555 | WP_001001927.1 | molecular chaperone YcdY | - |
| CPZ97_RS04805 () | 893102..893839 | - | 738 | WP_000283663.1 | zinc-binding phosphatase | - |
| CPZ97_RS04810 () | 893894..894832 | - | 939 | WP_000351336.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| CPZ97_RS04820 () | 895303..896145 | - | 843 | WP_005020348.1 | DUF4942 domain-containing protein | - |
| CPZ97_RS04825 () | 896242..896439 | - | 198 | WP_000839257.1 | DUF957 domain-containing protein | - |
| CPZ97_RS04830 () | 896451..896942 | - | 492 | WP_000976859.1 | hypothetical protein | - |
| CPZ97_RS04835 () | 896939..897313 | - | 375 | WP_001094433.1 | toxin | Toxin Detail |
| CPZ97_RS04840 () | 897360..897737 | - | 378 | WP_001285603.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CPZ97_RS04845 () | 897787..898431 | - | 645 | WP_000086764.1 | hypothetical protein | - |
| CPZ97_RS04850 () | 898450..898671 | - | 222 | WP_000692331.1 | DUF987 domain-containing protein | - |
| CPZ97_RS04855 () | 898740..899192 | - | 453 | WP_134802012.1 | RadC family protein | - |
| CPZ97_RS04860 () | 899208..899681 | - | 474 | WP_001313575.1 | antirestriction protein | - |
| CPZ97_RS04870 () | 899961..900782 | - | 822 | WP_001234573.1 | DUF945 domain-containing protein | - |
| CPZ97_RS04880 () | 900883..901056 | - | 174 | WP_000088742.1 | DUF905 family protein | - |
| CPZ97_RS04885 () | 901176..901659 | - | 484 | Protein_919 | hypothetical protein | - |
| CPZ97_RS04890 () | 902090..902557 | - | 468 | WP_000668907.1 | hypothetical protein | - |
| CPZ97_RS04895 () | 902690..902953 | - | 264 | WP_078164616.1 | phospholipase | - |
| CPZ97_RS04900 () | 903051..904159 | + | 1109 | Protein_922 | IS3 family transposase ISSd1 | Transposase |
| CPZ97_RS04915 () | 906898..909075 | + | 2178 | WP_011378642.1 | Vitamin B12 transporter BtuB | VF |
| CPZ97_RS04920 () | 909120..910076 | - | 957 | WP_000271275.1 | hypothetical protein | VF |
| CPZ97_RS04925 () | 910161..911390 | - | 1230 | WP_000933674.1 | hypothetical protein | VF |
| CPZ97_RS04930 () | 911494..915153 | - | 3660 | WP_011378643.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CPZ97_RS04935 () | 915293..916408 | - | 1116 | WP_005020367.1 | hypothetical protein | VF |
| CPZ97_RS04955 () | 918969..919664 | - | 696 | Protein_931 | IS1 family transposase IS1N | Transposase |
| CPZ97_RS04965 () | 920016..920666 | - | 651 | WP_001007762.1 | metal-binding protein ZinT | - |
| CPZ97_RS04970 () | 920923..921558 | - | 636 | WP_001240091.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| CPZ97_RS04975 () | 921559..922563 | - | 1005 | WP_000740096.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| CPZ97_RS04980 () | 922662..922784 | - | 123 | Protein_935 | hydroxyisourate hydrolase | - |
| CPZ97_RS04990 () | 923541..923849 | - | 309 | Protein_937 | hydroxyisourate hydrolase | - |
| CPZ97_RS04995 () | 923982..924632 | + | 651 | WP_005020386.1 | Sensor histidine kinase RcsC | VF |
| CPZ97_RS05005 () | 925359..925733 | - | 375 | Protein_940 | MFS transporter | - |
| CPZ97_RS05015 () | 925846..926540 | + | 695 | WP_087786203.1 | IS1 family transposase IS1N | Transposase |
| CPZ97_RS05025 () | 926623..927981 | + | 1359 | WP_000826786.1 | two-component system sensor histidine kinase HprS | - |
| CPZ97_RS05030 () | 928040..928734 | + | 695 | WP_134801628.1 | IS1 family transposase IS1N | Transposase |
| CPZ97_RS05035 () | 928863..929249 | - | 387 | Protein_944 | protein deglycase HchA | - |
| CPZ97_RS05040 () | 929265..929962 | - | 698 | Protein_945 | IS1 family transposase | - |
| CPZ97_RS05045 () | 930018..930491 | - | 474 | Protein_946 | protein deglycase HchA | - |
| CPZ97_RS05055 () | 931083..931199 | - | 117 | Protein_947 | porin | - |
| CPZ97_RS05060 () | 931215..931912 | - | 698 | Protein_948 | IS1 family transposase IS1R | Transposase |
| CPZ97_RS05065 () | 931941..932708 | - | 768 | Protein_949 | porin | - |
| CPZ97_RS05070 () | 932764..933461 | + | 698 | Protein_950 | IS1 family transposase | - |
| CPZ97_RS27475 () | 934760..934906 | + | 147 | WP_171764078.1 | hypothetical protein | - |
| CPZ97_RS05090 () | 934921..935286 | + | 366 | WP_078164536.1 | permease | - |
| CPZ97_RS05095 () | 935326..936010 | + | 685 | Protein_954 | phosphohydrolase | - |
| CPZ97_RS05100 () | 936077..937495 | + | 1419 | WP_001157258.1 | DNA-cytosine methyltransferase | - |
| CPZ97_RS05105 () | 937476..937946 | + | 471 | WP_000785996.1 | VSPR family DNA mismatch endonuclease | - |
| CPZ97_RS05110 () | 937935..938855 | - | 921 | WP_001212213.1 | drug/metabolite exporter YedA | - |
| CPZ97_RS05115 () | 939028..939945 | + | 918 | WP_000922683.1 | DUF808 domain-containing protein | - |
| CPZ97_RS05120 () | 940024..940206 | + | 183 | WP_000009307.1 | DUF2158 domain-containing protein | - |
| CPZ97_RS05125 () | 940395..942071 | + | 1677 | WP_000431441.1 | cellulose biosynthesis regulator YedQ | - |
| CPZ97_RS05130 () | 942068..942883 | - | 816 | WP_000491523.1 | mannosyl-3-phosphoglycerate phosphatase-related protein | - |
| CPZ97_RS05135 () | 943181..943408 | - | 228 | WP_000844800.1 | peroxide/acid resistance protein YodD | - |
| CPZ97_RS05140 () | 943557..943745 | + | 189 | WP_000867217.1 | protein DsrB | - |
| CPZ97_RS05145 () | 943789..944025 | - | 237 | Protein_964 | Transcriptional regulatory protein RcsA | VF |
| CPZ97_RS05150 () | 944085..944779 | + | 695 | WP_134801557.1 | IS1 family transposase IS1N | Transposase |
| CPZ97_RS05155 () | 944854..945551 | - | 698 | Protein_966 | IS1 family transposase | - |
| CPZ97_RS05160 () | 945598..945870 | + | 273 | Protein_967 | leucine-rich repeat domain-containing protein | - |
| CPZ97_RS05165 () | 945885..946578 | - | 694 | Protein_968 | IS1 family transposase | - |
| CPZ97_RS05175 () | 946655..947032 | + | 378 | WP_023600695.1 | hypothetical protein | - |
| CPZ97_RS05180 () | 946947..947672 | + | 726 | WP_011378644.1 | hypothetical protein ; Integrase | Integrase |
| CPZ97_RS27480 () | 948584..948835 | + | 252 | WP_134802016.1 | hypothetical protein | - |
| CPZ97_RS05200 () | 948940..949209 | - | 270 | Protein_973 | tail fiber assembly protein | - |
| CPZ97_RS05205 () | 949266..949934 | + | 669 | WP_000239883.1 | class I SAM-dependent methyltransferase | - |
| CPZ97_RS05210 () | 950298..950549 | + | 252 | Protein_975 | IS1 family transposase IS1N | Transposase |
| CPZ97_RS05215 () | 950662..951890 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| CPZ97_RS05220 () | 951900..952328 | + | 429 | Protein_977 | IS1 family transposase IS1N | Transposase |
| CPZ97_RS05225 () | 952360..953852 | + | 1493 | Protein_978 | hypothetical protein | VF |
| CPZ97_RS27485 () | 955092..955268 | + | 177 | WP_000114005.1 | hypothetical protein | VF |
| CPZ97_RS27490 () | 955269..955448 | - | 180 | WP_001039884.1 | hypothetical protein | - |
| CPZ97_RS05240 () | 955448..955603 | - | 156 | Protein_982 | DUF4376 domain-containing protein | - |
| CPZ97_RS05245 () | 955596..956630 | - | 1035 | Protein_983 | prophage tail fiber N-terminal domain-containing protein | - |
| CPZ97_RS05250 () | 956654..957199 | - | 546 | WP_000902887.1 | tail fiber assembly protein | - |
| CPZ97_RS27495 () | 957202..957315 | - | 114 | WP_000111993.1 | tail protein | - |
| CPZ97_RS05260 () | 957354..958510 | + | 1157 | WP_134801549.1 | IS3 family transposase ISSd1 | Transposase |
| CPZ97_RS05265 () | 958548..958769 | + | 222 | Protein_987 | integrase | - |
| CPZ97_RS05275 () | 959517..959624 | + | 108 | Protein_989 | integrase | - |
| CPZ97_RS05285 () | 959816..960613 | + | 798 | WP_005023745.1 | DgsA anti-repressor MtfA | - |
| CPZ97_RS05295 () | 961102..963310 | + | 2209 | Protein_991 | inverse autotransporter beta domain-containing protein | - |
| CPZ97_RS05305 () | 964644..964769 | - | 126 | Protein_993 | prophage tail fiber N-terminal domain-containing protein | - |
| CPZ97_RS05310 () | 964775..965730 | - | 956 | Protein_994 | late control protein | - |
| CPZ97_RS05325 () | 967403..968073 | - | 671 | Protein_997 | SOS response-associated peptidase | - |
| CPZ97_RS05330 () | 968182..968415 | - | 234 | WP_000790504.1 | sulfurtransferase-like selenium metabolism protein YedF | - |
| CPZ97_RS05335 () | 968412..969617 | - | 1206 | WP_000118917.1 | selenium metabolism membrane protein YedE/FdhT | - |
| CPZ97_RS05340 () | 969804..970217 | + | 414 | WP_001295642.1 | lipoprotein | - |
| CPZ97_RS05345 () | 970251..971738 | - | 1488 | WP_001245709.1 | alpha-amylase | - |
| CPZ97_RS05350 () | 971816..972181 | - | 366 | Protein_1002 | flagella biosynthesis regulatory protein FliT | - |
| CPZ97_RS05355 () | 972181..972591 | - | 411 | WP_000270670.1 | flagellar export chaperone FliS | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|